RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 CFAP43Q8NDM7 1665 aa31.78■■■□□ 2.68
CACNB3-205ENST00000547392 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
CACNB3-205ENST00000547392 CUL7Q14999 1698 aa31.77■■■□□ 2.68
CACNB3-205ENST00000547392 PELP1Q8IZL8 1130 aaKnown RBP31.76■■■□□ 2.67
CACNB3-205ENST00000547392 RAD54L2Q9Y4B4 1467 aa31.76■■■□□ 2.67
CACNB3-205ENST00000547392 EFCAB5A4FU69 1503 aa31.73■■■□□ 2.67
CACNB3-205ENST00000547392 MIER1Q8N108 512 aa31.72■■■□□ 2.67
CACNB3-205ENST00000547392 PCF11O94913 1555 aaKnown RBP31.69■■■□□ 2.66
CACNB3-205ENST00000547392 WDR97A6NE52 1622 aa31.66■■■□□ 2.66
CACNB3-205ENST00000547392 GTF3C3Q9Y5Q9 886 aa31.65■■■□□ 2.66
CACNB3-205ENST00000547392 CTTNBP2Q8WZ74 1663 aa31.65■■■□□ 2.66
CACNB3-205ENST00000547392 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.66
CACNB3-205ENST00000547392 FYCO1Q9BQS8 1478 aa31.63■■■□□ 2.65
CACNB3-205ENST00000547392 URB2Q14146 1524 aaKnown RBP31.63■■■□□ 2.65
CACNB3-205ENST00000547392 PHLDB1Q86UU1 1377 aa31.61■■■□□ 2.65
CACNB3-205ENST00000547392 RAB3GAP2Q9H2M9 1393 aa31.59■■■□□ 2.65
CACNB3-205ENST00000547392 KIF21AQ7Z4S6 1674 aa31.58■■■□□ 2.65
CACNB3-205ENST00000547392 CASKIN1Q8WXD9 1431 aa31.58■■■□□ 2.65
CACNB3-205ENST00000547392 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
CACNB3-205ENST00000547392 SETD5Q9C0A6 1442 aa31.55■■■□□ 2.64
CACNB3-205ENST00000547392 FHOD3Q2V2M9 1422 aa31.55■■■□□ 2.64
CACNB3-205ENST00000547392 ABCA5Q8WWZ7 1642 aa31.52■■■□□ 2.64
CACNB3-205ENST00000547392 MAPKBP1O60336 1514 aa31.51■■■□□ 2.64
CACNB3-205ENST00000547392 ITGAEP38570 1179 aa31.51■■■□□ 2.63
CACNB3-205ENST00000547392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.49■■■□□ 2.63
CACNB3-205ENST00000547392 P3H3Q8IVL6 736 aa31.47■■■□□ 2.63
CACNB3-205ENST00000547392 FMN1Q68DA7 1419 aa31.46■■■□□ 2.63
CACNB3-205ENST00000547392 YTHDC1Q96MU7 727 aaKnown RBP31.43■■■□□ 2.62
CACNB3-205ENST00000547392 SAMD9Q5K651 1589 aa31.41■■■□□ 2.62
CACNB3-205ENST00000547392 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
CACNB3-205ENST00000547392 GAPVD1Q14C86 1478 aa31.38■■■□□ 2.61
CACNB3-205ENST00000547392 FAM50AQ14320 339 aaKnown RBP31.36■■■□□ 2.61
CACNB3-205ENST00000547392 TDRD9Q8NDG6 1382 aaKnown RBP31.31■■■□□ 2.6
CACNB3-205ENST00000547392 ATP1B4Q9UN42 357 aaPredicted RBP31.31■■■□□ 2.6
CACNB3-205ENST00000547392 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
CACNB3-205ENST00000547392 FGD6Q6ZV73 1430 aa31.26■■■□□ 2.59
CACNB3-205ENST00000547392 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
CACNB3-205ENST00000547392 TIMELESSQ9UNS1 1208 aa31.25■■■□□ 2.59
CACNB3-205ENST00000547392 GRIN2BQ13224 1484 aa31.24■■■□□ 2.59
CACNB3-205ENST00000547392 LRRIQ1Q96JM4 1722 aa31.22■■■□□ 2.59
CACNB3-205ENST00000547392 MRC2Q9UBG0 1479 aa31.17■■■□□ 2.58
CACNB3-205ENST00000547392 MTUS2Q5JR59 1369 aa31.17■■■□□ 2.58
CACNB3-205ENST00000547392 EHBP1L1Q8N3D4 1523 aa31.12■■■□□ 2.57
CACNB3-205ENST00000547392 SUPT6HQ7KZ85 1726 aaKnown RBP31.11■■■□□ 2.57
CACNB3-205ENST00000547392 NCOA2Q15596 1464 aa31.1■■■□□ 2.57
CACNB3-205ENST00000547392 PBRM1Q86U86 1689 aa31.1■■■□□ 2.57
CACNB3-205ENST00000547392 MYOM3Q5VTT5 1437 aa31.09■■■□□ 2.57
CACNB3-205ENST00000547392 SIN3AQ96ST3 1273 aa31.08■■■□□ 2.57
CACNB3-205ENST00000547392 HFM1A2PYH4 1435 aa31.08■■■□□ 2.57
CACNB3-205ENST00000547392 ARHGEF11O15085 1522 aa31.05■■■□□ 2.56
CACNB3-205ENST00000547392 CCDC18Q5T9S5 1454 aa31.05■■■□□ 2.56
CACNB3-205ENST00000547392 PTPN23Q9H3S7 1636 aa31.03■■■□□ 2.56
CACNB3-205ENST00000547392 PTPRKQ15262 1439 aa31.02■■■□□ 2.56
CACNB3-205ENST00000547392 UGGT2Q9NYU1 1516 aa31.02■■■□□ 2.56
CACNB3-205ENST00000547392 ADAMTS12P58397 1594 aa31■■■□□ 2.55
CACNB3-205ENST00000547392 UACAQ9BZF9 1416 aa30.99■■■□□ 2.55
CACNB3-205ENST00000547392 ERCC6Q03468 1493 aa30.99■■■□□ 2.55
CACNB3-205ENST00000547392 WDR62O43379 1518 aa30.98■■■□□ 2.55
CACNB3-205ENST00000547392 IQGAP2Q13576 1575 aa30.98■■■□□ 2.55
CACNB3-205ENST00000547392 HECW1Q76N89 1606 aa30.97■■■□□ 2.55
CACNB3-205ENST00000547392 PPP1R15AO75807 674 aaPredicted RBP30.97■■■□□ 2.55
CACNB3-205ENST00000547392 NAIPQ13075 1403 aa30.94■■■□□ 2.54
CACNB3-205ENST00000547392 MAGI3Q5TCQ9 1506 aa30.94■■■□□ 2.54
CACNB3-205ENST00000547392 ZNF608Q9ULD9 1512 aaPredicted RBP30.94■■■□□ 2.54
CACNB3-205ENST00000547392 TCOF1Q13428 1488 aaKnown RBP30.93■■■□□ 2.54
CACNB3-205ENST00000547392 EPRSP07814 1512 aaKnown RBP30.85■■■□□ 2.53
CACNB3-205ENST00000547392 IFT140Q96RY7 1462 aa30.81■■■□□ 2.52
CACNB3-205ENST00000547392 AKNAQ7Z591 1439 aa30.81■■■□□ 2.52
CACNB3-205ENST00000547392 GCC2Q8IWJ2 1684 aa30.81■■■□□ 2.52
CACNB3-205ENST00000547392 TONSLQ96HA7 1378 aa30.8■■■□□ 2.52
CACNB3-205ENST00000547392 MIA2Q96PC5 1412 aa30.79■■■□□ 2.52
CACNB3-205ENST00000547392 DDX10Q13206 875 aaKnown RBP30.75■■■□□ 2.51
CACNB3-205ENST00000547392 CDK13Q14004 1512 aaKnown RBP30.7■■■□□ 2.51
CACNB3-205ENST00000547392 KIAA0586Q9BVV6 1533 aa30.7■■■□□ 2.5
CACNB3-205ENST00000547392 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
CACNB3-205ENST00000547392 EIF4G3O43432 1585 aaKnown RBP30.67■■■□□ 2.5
CACNB3-205ENST00000547392 KIAA0556O60303 1618 aa30.65■■■□□ 2.5
CACNB3-205ENST00000547392 KCNH8Q96L42 1107 aa30.65■■■□□ 2.5
CACNB3-205ENST00000547392 SUPT16HQ9Y5B9 1047 aaKnown RBP30.63■■■□□ 2.49
CACNB3-205ENST00000547392 DISP1Q96F81 1524 aa30.62■■■□□ 2.49
CACNB3-205ENST00000547392 CCER2I3L3R5 266 aa30.62■■■□□ 2.49
CACNB3-205ENST00000547392 DENND4BO75064 1496 aaPredicted RBP30.6■■■□□ 2.49
CACNB3-205ENST00000547392 RRP7BPQ9NSQ0 103 aa30.59■■■□□ 2.49
CACNB3-205ENST00000547392 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
CACNB3-205ENST00000547392 KDM6BO15054 1643 aa30.56■■■□□ 2.48
CACNB3-205ENST00000547392 ROCK1Q13464 1354 aa30.54■■■□□ 2.48
CACNB3-205ENST00000547392 RAPGEF6Q8TEU7 1601 aa30.54■■■□□ 2.48
CACNB3-205ENST00000547392 HIRIP3Q9BW71 556 aaPredicted RBP30.54■■■□□ 2.48
CACNB3-205ENST00000547392 NUP153P49790 1475 aaKnown RBP30.53■■■□□ 2.48
CACNB3-205ENST00000547392 CHIC2Q9UKJ5 165 aa30.53■■■□□ 2.48
CACNB3-205ENST00000547392 ANP32CO43423 234 aa30.51■■■□□ 2.48
CACNB3-205ENST00000547392 DNMT1P26358 1616 aaKnown RBP30.5■■■□□ 2.47
CACNB3-205ENST00000547392 DAPK1P53355 1430 aa30.48■■■□□ 2.47
CACNB3-205ENST00000547392 MAGI1Q96QZ7 1491 aaPredicted RBP30.45■■■□□ 2.47
CACNB3-205ENST00000547392 TRIM52Q96A61 297 aa30.45■■■□□ 2.46
CACNB3-205ENST00000547392 MPHOSPH9Q99550 1183 aa30.45■■■□□ 2.46
CACNB3-205ENST00000547392 ABCC5O15440 1437 aa30.43■■■□□ 2.46
CACNB3-205ENST00000547392 CDK11AQ9UQ88 783 aaPredicted RBP30.41■■■□□ 2.46
CACNB3-205ENST00000547392 FBLN2P98095 1184 aa30.4■■■□□ 2.46
CACNB3-205ENST00000547392 ARID3CA6NKF2 412 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms