RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
BRF1-210ENST00000547374 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.52
BRF1-210ENST00000547374 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
BRF1-210ENST00000547374 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
BRF1-210ENST00000547374 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
BRF1-210ENST00000547374 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
BRF1-210ENST00000547374 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
BRF1-210ENST00000547374 IGF1RP08069 1367 aa18.19■□□□□ 0.5
BRF1-210ENST00000547374 CUX1P39880 1505 aa18.19■□□□□ 0.5
BRF1-210ENST00000547374 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
BRF1-210ENST00000547374 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
BRF1-210ENST00000547374 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
BRF1-210ENST00000547374 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
BRF1-210ENST00000547374 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
BRF1-210ENST00000547374 FOXD1Q16676 465 aa18.17■□□□□ 0.5
BRF1-210ENST00000547374 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
BRF1-210ENST00000547374 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
BRF1-210ENST00000547374 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
BRF1-210ENST00000547374 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
BRF1-210ENST00000547374 RBM19Q9Y4C8 960 aaKnown RBP18.1■□□□□ 0.49
BRF1-210ENST00000547374 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
BRF1-210ENST00000547374 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
BRF1-210ENST00000547374 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
BRF1-210ENST00000547374 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
BRF1-210ENST00000547374 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
BRF1-210ENST00000547374 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.47
BRF1-210ENST00000547374 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
BRF1-210ENST00000547374 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
BRF1-210ENST00000547374 HSPA5P11021 654 aaKnown RBP17.99■□□□□ 0.47
BRF1-210ENST00000547374 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
BRF1-210ENST00000547374 MRS2Q9HD23 443 aa17.99■□□□□ 0.47
BRF1-210ENST00000547374 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
BRF1-210ENST00000547374 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
BRF1-210ENST00000547374 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
BRF1-210ENST00000547374 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
BRF1-210ENST00000547374 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
BRF1-210ENST00000547374 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
BRF1-210ENST00000547374 CFTRP13569 1480 aa17.96■□□□□ 0.47
BRF1-210ENST00000547374 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
BRF1-210ENST00000547374 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■■ 36.9
BRF1-210ENST00000547374 CCER2I3L3R5 266 aa17.93■□□□□ 0.46
BRF1-210ENST00000547374 FBLN2P98095 1184 aa17.91■□□□□ 0.46
BRF1-210ENST00000547374 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
BRF1-210ENST00000547374 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
BRF1-210ENST00000547374 L3MBTL2Q969R5 705 aa17.88■□□□□ 0.45
BRF1-210ENST00000547374 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
BRF1-210ENST00000547374 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
BRF1-210ENST00000547374 TIMELESSQ9UNS1 1208 aa17.85■□□□□ 0.45
BRF1-210ENST00000547374 CCDC18Q5T9S5 1454 aa17.85■□□□□ 0.45
BRF1-210ENST00000547374 NESP48681 1621 aa17.84■□□□□ 0.45
BRF1-210ENST00000547374 WASHC2AQ641Q2 1341 aa17.84■□□□□ 0.45
BRF1-210ENST00000547374 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
BRF1-210ENST00000547374 NBR1Q14596 966 aa17.83■□□□□ 0.44
BRF1-210ENST00000547374 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.44
BRF1-210ENST00000547374 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
BRF1-210ENST00000547374 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
BRF1-210ENST00000547374 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
BRF1-210ENST00000547374 BCL11AQ9H165 835 aa17.8■□□□□ 0.44
BRF1-210ENST00000547374 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
BRF1-210ENST00000547374 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
BRF1-210ENST00000547374 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
BRF1-210ENST00000547374 MSH5O43196 834 aa17.77■□□□□ 0.43
BRF1-210ENST00000547374 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
BRF1-210ENST00000547374 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
BRF1-210ENST00000547374 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
BRF1-210ENST00000547374 AQRO60306 1485 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■■■■ 29.9
BRF1-210ENST00000547374 PRKRIP1Q9H875 184 aaPredicted RBP17.71■□□□□ 0.43
BRF1-210ENST00000547374 NBPF8Q3BBV2 869 aa17.7■□□□□ 0.42
BRF1-210ENST00000547374 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
BRF1-210ENST00000547374 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
BRF1-210ENST00000547374 CASKIN1Q8WXD9 1431 aa17.7■□□□□ 0.42
BRF1-210ENST00000547374 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
BRF1-210ENST00000547374 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
BRF1-210ENST00000547374 TMC1Q8TDI8 760 aa17.68■□□□□ 0.42
BRF1-210ENST00000547374 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
BRF1-210ENST00000547374 NAIPQ13075 1403 aa17.67■□□□□ 0.42
BRF1-210ENST00000547374 MYOM3Q5VTT5 1437 aa17.64■□□□□ 0.41
BRF1-210ENST00000547374 RGL3Q3MIN7 710 aa17.64■□□□□ 0.41
BRF1-210ENST00000547374 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
BRF1-210ENST00000547374 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
BRF1-210ENST00000547374 HFM1A2PYH4 1435 aa17.62■□□□□ 0.41
BRF1-210ENST00000547374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■□□□□ 10.4
BRF1-210ENST00000547374 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
BRF1-210ENST00000547374 KIF7Q2M1P5 1343 aa17.6■□□□□ 0.41
BRF1-210ENST00000547374 PKD2Q13563 968 aa17.59■□□□□ 0.41
BRF1-210ENST00000547374 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
BRF1-210ENST00000547374 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
BRF1-210ENST00000547374 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
BRF1-210ENST00000547374 MAP3K1Q13233 1512 aa17.56■□□□□ 0.4
BRF1-210ENST00000547374 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
BRF1-210ENST00000547374 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
BRF1-210ENST00000547374 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
BRF1-210ENST00000547374 AKNAQ7Z591 1439 aa17.52■□□□□ 0.4
BRF1-210ENST00000547374 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.39
BRF1-210ENST00000547374 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
BRF1-210ENST00000547374 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
BRF1-210ENST00000547374 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
BRF1-210ENST00000547374 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
BRF1-210ENST00000547374 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
BRF1-210ENST00000547374 PAK3O75914 559 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms