RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
SLC38A1-204ENST00000546893 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
SLC38A1-204ENST00000546893 MIER1Q8N108 512 aa19.89■□□□□ 0.77
SLC38A1-204ENST00000546893 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
SLC38A1-204ENST00000546893 CFAP43Q8NDM7 1665 aa19.85■□□□□ 0.77
SLC38A1-204ENST00000546893 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
SLC38A1-204ENST00000546893 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
SLC38A1-204ENST00000546893 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.764e-7■■■■□ 24.2
SLC38A1-204ENST00000546893 CUL7Q14999 1698 aa19.82■□□□□ 0.76
SLC38A1-204ENST00000546893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.82■□□□□ 0.76
SLC38A1-204ENST00000546893 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
SLC38A1-204ENST00000546893 NESP48681 1621 aa19.81■□□□□ 0.76
SLC38A1-204ENST00000546893 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
SLC38A1-204ENST00000546893 SUPT16HQ9Y5B9 1047 aaKnown RBP19.79■□□□□ 0.76
SLC38A1-204ENST00000546893 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
SLC38A1-204ENST00000546893 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
SLC38A1-204ENST00000546893 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
SLC38A1-204ENST00000546893 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
SLC38A1-204ENST00000546893 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
SLC38A1-204ENST00000546893 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
SLC38A1-204ENST00000546893 PCF11O94913 1555 aaKnown RBP19.7■□□□□ 0.74
SLC38A1-204ENST00000546893 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
SLC38A1-204ENST00000546893 MAPKBP1O60336 1514 aa19.69■□□□□ 0.74
SLC38A1-204ENST00000546893 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
SLC38A1-204ENST00000546893 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
SLC38A1-204ENST00000546893 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
SLC38A1-204ENST00000546893 PHLDB1Q86UU1 1377 aa19.64■□□□□ 0.74
SLC38A1-204ENST00000546893 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
SLC38A1-204ENST00000546893 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
SLC38A1-204ENST00000546893 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
SLC38A1-204ENST00000546893 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
SLC38A1-204ENST00000546893 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
SLC38A1-204ENST00000546893 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
SLC38A1-204ENST00000546893 FHOD3Q2V2M9 1422 aa19.54■□□□□ 0.72
SLC38A1-204ENST00000546893 ABCA5Q8WWZ7 1642 aa19.53■□□□□ 0.72
SLC38A1-204ENST00000546893 ITGAEP38570 1179 aa19.53■□□□□ 0.72
SLC38A1-204ENST00000546893 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
SLC38A1-204ENST00000546893 FAM50AQ14320 339 aaKnown RBP19.51■□□□□ 0.71
SLC38A1-204ENST00000546893 FGD6Q6ZV73 1430 aa19.5■□□□□ 0.71
SLC38A1-204ENST00000546893 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
SLC38A1-204ENST00000546893 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
SLC38A1-204ENST00000546893 HFM1A2PYH4 1435 aa19.46■□□□□ 0.71
SLC38A1-204ENST00000546893 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
SLC38A1-204ENST00000546893 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
SLC38A1-204ENST00000546893 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
SLC38A1-204ENST00000546893 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
SLC38A1-204ENST00000546893 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
SLC38A1-204ENST00000546893 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
SLC38A1-204ENST00000546893 SUPT6HQ7KZ85 1726 aaKnown RBP19.43■□□□□ 0.7
SLC38A1-204ENST00000546893 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
SLC38A1-204ENST00000546893 PPP1R15AO75807 674 aaPredicted RBP19.39■□□□□ 0.69
SLC38A1-204ENST00000546893 P3H3Q8IVL6 736 aa19.39■□□□□ 0.69
SLC38A1-204ENST00000546893 PTPN23Q9H3S7 1636 aa19.38■□□□□ 0.69
SLC38A1-204ENST00000546893 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
SLC38A1-204ENST00000546893 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
SLC38A1-204ENST00000546893 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
SLC38A1-204ENST00000546893 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
SLC38A1-204ENST00000546893 NCOA2Q15596 1464 aa19.36■□□□□ 0.69
SLC38A1-204ENST00000546893 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
SLC38A1-204ENST00000546893 RBM19Q9Y4C8 960 aaKnown RBP19.36■□□□□ 0.69
SLC38A1-204ENST00000546893 UGGT2Q9NYU1 1516 aa19.34■□□□□ 0.69
SLC38A1-204ENST00000546893 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
SLC38A1-204ENST00000546893 TCOF1Q13428 1488 aaKnown RBP19.34■□□□□ 0.69
SLC38A1-204ENST00000546893 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
SLC38A1-204ENST00000546893 HECW1Q76N89 1606 aa19.33■□□□□ 0.69
SLC38A1-204ENST00000546893 MSH5O43196 834 aa19.33■□□□□ 0.68
SLC38A1-204ENST00000546893 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
SLC38A1-204ENST00000546893 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
SLC38A1-204ENST00000546893 NAIPQ13075 1403 aa19.3■□□□□ 0.68
SLC38A1-204ENST00000546893 LRRIQ1Q96JM4 1722 aa19.29■□□□□ 0.68
SLC38A1-204ENST00000546893 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
SLC38A1-204ENST00000546893 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
SLC38A1-204ENST00000546893 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
SLC38A1-204ENST00000546893 WDR62O43379 1518 aa19.26■□□□□ 0.67
SLC38A1-204ENST00000546893 ANP32CO43423 234 aa19.25■□□□□ 0.67
SLC38A1-204ENST00000546893 IQGAP2Q13576 1575 aa19.24■□□□□ 0.67
SLC38A1-204ENST00000546893 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
SLC38A1-204ENST00000546893 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
SLC38A1-204ENST00000546893 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
SLC38A1-204ENST00000546893 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
SLC38A1-204ENST00000546893 BCANQ96GW7 911 aa19.19■□□□□ 0.66
SLC38A1-204ENST00000546893 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
SLC38A1-204ENST00000546893 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
SLC38A1-204ENST00000546893 UBE2Q2Q8WVN8 375 aa19.16■□□□□ 0.66
SLC38A1-204ENST00000546893 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.66
SLC38A1-204ENST00000546893 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
SLC38A1-204ENST00000546893 MAGI3Q5TCQ9 1506 aa19.14■□□□□ 0.65
SLC38A1-204ENST00000546893 KDM5BQ9UGL1 1544 aa19.13■□□□□ 0.65
SLC38A1-204ENST00000546893 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
SLC38A1-204ENST00000546893 NEFLP07196 543 aa19.11■□□□□ 0.65
SLC38A1-204ENST00000546893 MYT1LQ9UL68 1186 aa19.11■□□□□ 0.65
SLC38A1-204ENST00000546893 KIAA0586Q9BVV6 1533 aa19.06■□□□□ 0.64
SLC38A1-204ENST00000546893 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
SLC38A1-204ENST00000546893 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
SLC38A1-204ENST00000546893 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
SLC38A1-204ENST00000546893 FKBP8Q14318 412 aa19.04■□□□□ 0.64
SLC38A1-204ENST00000546893 FANCIQ9NVI1 1328 aa19.04■□□□□ 0.64
SLC38A1-204ENST00000546893 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
SLC38A1-204ENST00000546893 KIAA0556O60303 1618 aa19.02■□□□□ 0.64
SLC38A1-204ENST00000546893 ERICH6BQ5W0A0 696 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms