RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
RFX4-207ENST00000546882 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
RFX4-207ENST00000546882 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
RFX4-207ENST00000546882 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
RFX4-207ENST00000546882 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
RFX4-207ENST00000546882 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
RFX4-207ENST00000546882 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
RFX4-207ENST00000546882 CUX1P39880 1505 aa16.14■□□□□ 0.17
RFX4-207ENST00000546882 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
RFX4-207ENST00000546882 KIF13AQ9H1H9 1805 aa16.1■□□□□ 0.17
RFX4-207ENST00000546882 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
RFX4-207ENST00000546882 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
RFX4-207ENST00000546882 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
RFX4-207ENST00000546882 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
RFX4-207ENST00000546882 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
RFX4-207ENST00000546882 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
RFX4-207ENST00000546882 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
RFX4-207ENST00000546882 NUP160Q12769 1436 aa16.01■□□□□ 0.15
RFX4-207ENST00000546882 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
RFX4-207ENST00000546882 SHROOM2Q13796 1616 aa16■□□□□ 0.15
RFX4-207ENST00000546882 KDM4FA0A1W2PPD8 638 aa15.98■□□□□ 0.15
RFX4-207ENST00000546882 ADAMTS12P58397 1594 aa15.94■□□□□ 0.14
RFX4-207ENST00000546882 ABCC10Q5T3U5 1492 aa15.92■□□□□ 0.14
RFX4-207ENST00000546882 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
RFX4-207ENST00000546882 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
RFX4-207ENST00000546882 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
RFX4-207ENST00000546882 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
RFX4-207ENST00000546882 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
RFX4-207ENST00000546882 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
RFX4-207ENST00000546882 KDM6BO15054 1643 aa15.83■□□□□ 0.13
RFX4-207ENST00000546882 ZBTB22O15209 634 aa15.83■□□□□ 0.12
RFX4-207ENST00000546882 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
RFX4-207ENST00000546882 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
RFX4-207ENST00000546882 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
RFX4-207ENST00000546882 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
RFX4-207ENST00000546882 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
RFX4-207ENST00000546882 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
RFX4-207ENST00000546882 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
RFX4-207ENST00000546882 RUSC2Q8N2Y8 1516 aa15.73■□□□□ 0.11
RFX4-207ENST00000546882 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
RFX4-207ENST00000546882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
RFX4-207ENST00000546882 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
RFX4-207ENST00000546882 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
RFX4-207ENST00000546882 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
RFX4-207ENST00000546882 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
RFX4-207ENST00000546882 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
RFX4-207ENST00000546882 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
RFX4-207ENST00000546882 CAPN15O75808 1086 aa15.64■□□□□ 0.09
RFX4-207ENST00000546882 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
RFX4-207ENST00000546882 APLP2Q06481 763 aa15.61■□□□□ 0.09
RFX4-207ENST00000546882 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
RFX4-207ENST00000546882 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
RFX4-207ENST00000546882 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
RFX4-207ENST00000546882 GLI2P10070 1586 aa15.58■□□□□ 0.08
RFX4-207ENST00000546882 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
RFX4-207ENST00000546882 PTPRGP23470 1445 aa15.54■□□□□ 0.08
RFX4-207ENST00000546882 ASXL2Q76L83 1435 aa15.54■□□□□ 0.08
RFX4-207ENST00000546882 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
RFX4-207ENST00000546882 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
RFX4-207ENST00000546882 IGF1RP08069 1367 aa15.49■□□□□ 0.07
RFX4-207ENST00000546882 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
RFX4-207ENST00000546882 CUL7Q14999 1698 aa15.48■□□□□ 0.07
RFX4-207ENST00000546882 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
RFX4-207ENST00000546882 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
RFX4-207ENST00000546882 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
RFX4-207ENST00000546882 UHRF1BP1LA0JNW5 1464 aa15.46■□□□□ 0.07
RFX4-207ENST00000546882 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
RFX4-207ENST00000546882 TTBK1Q5TCY1 1321 aaPredicted RBP15.45■□□□□ 0.06
RFX4-207ENST00000546882 DSG3P32926 999 aa15.44■□□□□ 0.06
RFX4-207ENST00000546882 TEX14Q8IWB6 1497 aa15.42■□□□□ 0.06
RFX4-207ENST00000546882 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
RFX4-207ENST00000546882 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
RFX4-207ENST00000546882 CARMIL2Q6F5E8 1435 aa15.41■□□□□ 0.06
RFX4-207ENST00000546882 UACAQ9BZF9 1416 aa15.41■□□□□ 0.06
RFX4-207ENST00000546882 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
RFX4-207ENST00000546882 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
RFX4-207ENST00000546882 DISP1Q96F81 1524 aa15.36■□□□□ 0.05
RFX4-207ENST00000546882 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
RFX4-207ENST00000546882 IQGAP2Q13576 1575 aa15.35■□□□□ 0.05
RFX4-207ENST00000546882 ABCB7O75027 752 aa15.34■□□□□ 0.05
RFX4-207ENST00000546882 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
RFX4-207ENST00000546882 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
RFX4-207ENST00000546882 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
RFX4-207ENST00000546882 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
RFX4-207ENST00000546882 KIF21BO75037 1637 aa15.28■□□□□ 0.04
RFX4-207ENST00000546882 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
RFX4-207ENST00000546882 CFAP43Q8NDM7 1665 aa15.25■□□□□ 0.03
RFX4-207ENST00000546882 UGGT2Q9NYU1 1516 aa15.25■□□□□ 0.03
RFX4-207ENST00000546882 PTPRMP28827 1452 aa15.24■□□□□ 0.03
RFX4-207ENST00000546882 ADAMTSL3P82987 1691 aa15.23■□□□□ 0.03
RFX4-207ENST00000546882 KIAA0556O60303 1618 aa15.22■□□□□ 0.03
RFX4-207ENST00000546882 LMTK3Q96Q04 1460 aa15.21■□□□□ 0.03
RFX4-207ENST00000546882 ARAP3Q8WWN8 1544 aa15.19■□□□□ 0.02
RFX4-207ENST00000546882 KCNH8Q96L42 1107 aa15.19■□□□□ 0.02
RFX4-207ENST00000546882 POLA2Q14181 598 aa15.18■□□□□ 0.02
RFX4-207ENST00000546882 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
RFX4-207ENST00000546882 ABCA8O94911 1581 aa15.15■□□□□ 0.02
RFX4-207ENST00000546882 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
RFX4-207ENST00000546882 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
RFX4-207ENST00000546882 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms