RNA–Protein interactions for RNA: ENST00000546523.1

LINC02354-201, Transcript of long intergenic non-protein coding RNA 2354, humanhuman

TSL 3

Gene LINC02354, Length 353 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02354-201ENST00000546523 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
LINC02354-201ENST00000546523 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
LINC02354-201ENST00000546523 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
LINC02354-201ENST00000546523 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
LINC02354-201ENST00000546523 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
LINC02354-201ENST00000546523 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
LINC02354-201ENST00000546523 FBLN2P98095 1184 aa16.77■□□□□ 0.28
LINC02354-201ENST00000546523 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
LINC02354-201ENST00000546523 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
LINC02354-201ENST00000546523 CHD1O14646 1710 aa16.72■□□□□ 0.27
LINC02354-201ENST00000546523 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
LINC02354-201ENST00000546523 CEP170Q5SW79 1584 aa16.71■□□□□ 0.27
LINC02354-201ENST00000546523 NUP160Q12769 1436 aa16.69■□□□□ 0.26
LINC02354-201ENST00000546523 CLIP1P30622 1438 aa16.68■□□□□ 0.26
LINC02354-201ENST00000546523 KIAA0586Q9BVV6 1533 aa16.65■□□□□ 0.26
LINC02354-201ENST00000546523 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
LINC02354-201ENST00000546523 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
LINC02354-201ENST00000546523 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
LINC02354-201ENST00000546523 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
LINC02354-201ENST00000546523 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
LINC02354-201ENST00000546523 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
LINC02354-201ENST00000546523 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
LINC02354-201ENST00000546523 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
LINC02354-201ENST00000546523 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
LINC02354-201ENST00000546523 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
LINC02354-201ENST00000546523 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
LINC02354-201ENST00000546523 DISP1Q96F81 1524 aa16.52■□□□□ 0.24
LINC02354-201ENST00000546523 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
LINC02354-201ENST00000546523 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
LINC02354-201ENST00000546523 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
LINC02354-201ENST00000546523 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
LINC02354-201ENST00000546523 PRG4Q92954 1404 aaPredicted RBP16.47■□□□□ 0.23
LINC02354-201ENST00000546523 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
LINC02354-201ENST00000546523 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
LINC02354-201ENST00000546523 ERCC6L2Q5T890 1561 aa16.42■□□□□ 0.22
LINC02354-201ENST00000546523 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
LINC02354-201ENST00000546523 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
LINC02354-201ENST00000546523 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
LINC02354-201ENST00000546523 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
LINC02354-201ENST00000546523 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
LINC02354-201ENST00000546523 PTPRGP23470 1445 aa16.33■□□□□ 0.2
LINC02354-201ENST00000546523 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
LINC02354-201ENST00000546523 PLB1Q6P1J6 1458 aa16.3■□□□□ 0.2
LINC02354-201ENST00000546523 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
LINC02354-201ENST00000546523 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
LINC02354-201ENST00000546523 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
LINC02354-201ENST00000546523 APLP2Q06481 763 aa16.28■□□□□ 0.2
LINC02354-201ENST00000546523 ABCA8O94911 1581 aa16.28■□□□□ 0.2
LINC02354-201ENST00000546523 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
LINC02354-201ENST00000546523 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
LINC02354-201ENST00000546523 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
LINC02354-201ENST00000546523 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
LINC02354-201ENST00000546523 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
LINC02354-201ENST00000546523 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
LINC02354-201ENST00000546523 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
LINC02354-201ENST00000546523 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
LINC02354-201ENST00000546523 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
LINC02354-201ENST00000546523 KANK4Q5T7N3 995 aaPredicted RBP16.23■□□□□ 0.19
LINC02354-201ENST00000546523 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
LINC02354-201ENST00000546523 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
LINC02354-201ENST00000546523 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.19
LINC02354-201ENST00000546523 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
LINC02354-201ENST00000546523 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
LINC02354-201ENST00000546523 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
LINC02354-201ENST00000546523 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
LINC02354-201ENST00000546523 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
LINC02354-201ENST00000546523 UHRF1BP1LA0JNW5 1464 aa16.17■□□□□ 0.18
LINC02354-201ENST00000546523 ATP10BO94823 1461 aa16.16■□□□□ 0.18
LINC02354-201ENST00000546523 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
LINC02354-201ENST00000546523 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
LINC02354-201ENST00000546523 ADCY10Q96PN6 1610 aa16.14■□□□□ 0.17
LINC02354-201ENST00000546523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
LINC02354-201ENST00000546523 ZBTB22O15209 634 aa16.13■□□□□ 0.17
LINC02354-201ENST00000546523 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
LINC02354-201ENST00000546523 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
LINC02354-201ENST00000546523 EHBP1L1Q8N3D4 1523 aa16.1■□□□□ 0.17
LINC02354-201ENST00000546523 KDM5BQ9UGL1 1544 aa16.09■□□□□ 0.17
LINC02354-201ENST00000546523 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
LINC02354-201ENST00000546523 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
LINC02354-201ENST00000546523 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
LINC02354-201ENST00000546523 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
LINC02354-201ENST00000546523 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
LINC02354-201ENST00000546523 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
LINC02354-201ENST00000546523 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
LINC02354-201ENST00000546523 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
LINC02354-201ENST00000546523 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.16
LINC02354-201ENST00000546523 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
LINC02354-201ENST00000546523 KIF14Q15058 1648 aa16.01■□□□□ 0.15
LINC02354-201ENST00000546523 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC02354-201ENST00000546523 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
LINC02354-201ENST00000546523 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.14
LINC02354-201ENST00000546523 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
LINC02354-201ENST00000546523 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
LINC02354-201ENST00000546523 ABCC10Q5T3U5 1492 aa15.95■□□□□ 0.14
LINC02354-201ENST00000546523 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
LINC02354-201ENST00000546523 RRBP1Q9P2E9 1410 aaKnown RBP15.94■□□□□ 0.14
LINC02354-201ENST00000546523 KCNH8Q96L42 1107 aa15.94■□□□□ 0.14
LINC02354-201ENST00000546523 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
LINC02354-201ENST00000546523 FGD6Q6ZV73 1430 aa15.92■□□□□ 0.14
LINC02354-201ENST00000546523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms