RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
SSH1-203ENST00000546433 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
SSH1-203ENST00000546433 NEFMP07197 916 aa14.3□□□□□ -0.12
SSH1-203ENST00000546433 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
SSH1-203ENST00000546433 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
SSH1-203ENST00000546433 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
SSH1-203ENST00000546433 CLIP1P30622 1438 aa14.29□□□□□ -0.12
SSH1-203ENST00000546433 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
SSH1-203ENST00000546433 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
SSH1-203ENST00000546433 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
SSH1-203ENST00000546433 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
SSH1-203ENST00000546433 CARMIL1Q5VZK9 1371 aa14.25□□□□□ -0.13
SSH1-203ENST00000546433 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
SSH1-203ENST00000546433 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
SSH1-203ENST00000546433 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.14
SSH1-203ENST00000546433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.14
SSH1-203ENST00000546433 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
SSH1-203ENST00000546433 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
SSH1-203ENST00000546433 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
SSH1-203ENST00000546433 ANP32AP39687 249 aaKnown RBP14.16□□□□□ -0.14
SSH1-203ENST00000546433 WIZO95785 1651 aa14.16□□□□□ -0.14
SSH1-203ENST00000546433 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
SSH1-203ENST00000546433 CFDP1Q9UEE9 299 aaPredicted RBP14.15□□□□□ -0.14
SSH1-203ENST00000546433 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
SSH1-203ENST00000546433 MLECQ14165 292 aa14.14□□□□□ -0.15
SSH1-203ENST00000546433 KANK1Q14678 1352 aa14.14□□□□□ -0.15
SSH1-203ENST00000546433 JPH4Q96JJ6 628 aa14.14□□□□□ -0.15
SSH1-203ENST00000546433 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
SSH1-203ENST00000546433 PTPRGP23470 1445 aa14.09□□□□□ -0.15
SSH1-203ENST00000546433 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
SSH1-203ENST00000546433 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
SSH1-203ENST00000546433 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
SSH1-203ENST00000546433 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
SSH1-203ENST00000546433 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
SSH1-203ENST00000546433 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
SSH1-203ENST00000546433 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
SSH1-203ENST00000546433 NESP48681 1621 aa14.02□□□□□ -0.16
SSH1-203ENST00000546433 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
SSH1-203ENST00000546433 CFTRP13569 1480 aa13.99□□□□□ -0.17
SSH1-203ENST00000546433 RAPGEF2Q9Y4G8 1499 aa13.98□□□□□ -0.17
SSH1-203ENST00000546433 UPF2Q9HAU5 1272 aaKnown RBP13.98□□□□□ -0.17
SSH1-203ENST00000546433 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
SSH1-203ENST00000546433 FKBP8Q14318 412 aa13.97□□□□□ -0.17
SSH1-203ENST00000546433 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.17
SSH1-203ENST00000546433 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.96□□□□□ -0.17
SSH1-203ENST00000546433 FMN1Q68DA7 1419 aa13.96□□□□□ -0.18
SSH1-203ENST00000546433 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
SSH1-203ENST00000546433 EID1Q9Y6B2 187 aa13.95□□□□□ -0.18
SSH1-203ENST00000546433 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
SSH1-203ENST00000546433 ANP32BQ92688 251 aaKnown RBP13.94□□□□□ -0.18
SSH1-203ENST00000546433 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
SSH1-203ENST00000546433 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
SSH1-203ENST00000546433 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
SSH1-203ENST00000546433 TMC1Q8TDI8 760 aa13.92□□□□□ -0.18
SSH1-203ENST00000546433 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
SSH1-203ENST00000546433 FOXD1Q16676 465 aa13.9□□□□□ -0.18
SSH1-203ENST00000546433 HSP90AA1P07900 732 aaKnown RBP13.9□□□□□ -0.18
SSH1-203ENST00000546433 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
SSH1-203ENST00000546433 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
SSH1-203ENST00000546433 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
SSH1-203ENST00000546433 WDR43Q15061 677 aaKnown RBP eCLIP13.89□□□□□ -0.19
SSH1-203ENST00000546433 GGT6Q6P531 493 aa13.89□□□□□ -0.19
SSH1-203ENST00000546433 A0A0G2JS52 829 aa13.88□□□□□ -0.19
SSH1-203ENST00000546433 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
SSH1-203ENST00000546433 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
SSH1-203ENST00000546433 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
SSH1-203ENST00000546433 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
SSH1-203ENST00000546433 PRG4Q92954 1404 aaPredicted RBP13.87□□□□□ -0.19
SSH1-203ENST00000546433 CCDC136Q96JN2 1154 aa13.86□□□□□ -0.19
SSH1-203ENST00000546433 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
SSH1-203ENST00000546433 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
SSH1-203ENST00000546433 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.19
SSH1-203ENST00000546433 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
SSH1-203ENST00000546433 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
SSH1-203ENST00000546433 CCDC18Q5T9S5 1454 aa13.82□□□□□ -0.2
SSH1-203ENST00000546433 CEP162Q5TB80 1403 aa13.82□□□□□ -0.2
SSH1-203ENST00000546433 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
SSH1-203ENST00000546433 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
SSH1-203ENST00000546433 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
SSH1-203ENST00000546433 POGKQ9P215 609 aa13.78□□□□□ -0.2
SSH1-203ENST00000546433 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
SSH1-203ENST00000546433 LMOD2Q6P5Q4 547 aa13.77□□□□□ -0.21
SSH1-203ENST00000546433 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
SSH1-203ENST00000546433 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
SSH1-203ENST00000546433 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
SSH1-203ENST00000546433 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
SSH1-203ENST00000546433 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
SSH1-203ENST00000546433 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
SSH1-203ENST00000546433 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
SSH1-203ENST00000546433 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
SSH1-203ENST00000546433 MIER1Q8N108 512 aa13.72□□□□□ -0.21
SSH1-203ENST00000546433 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
SSH1-203ENST00000546433 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.22
SSH1-203ENST00000546433 KIF3BO15066 747 aa13.7□□□□□ -0.22
SSH1-203ENST00000546433 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
SSH1-203ENST00000546433 DDRGK1Q96HY6 314 aa13.69□□□□□ -0.22
SSH1-203ENST00000546433 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
SSH1-203ENST00000546433 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
SSH1-203ENST00000546433 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
SSH1-203ENST00000546433 EIF5BO60841 1220 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms