RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
CCDC38-202ENST00000546386 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
CCDC38-202ENST00000546386 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
CCDC38-202ENST00000546386 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
CCDC38-202ENST00000546386 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
CCDC38-202ENST00000546386 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
CCDC38-202ENST00000546386 TARBP1Q13395 1621 aaKnown RBP18.14■□□□□ 0.49
CCDC38-202ENST00000546386 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
CCDC38-202ENST00000546386 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
CCDC38-202ENST00000546386 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
CCDC38-202ENST00000546386 FAM50AQ14320 339 aaKnown RBP18.08■□□□□ 0.48
CCDC38-202ENST00000546386 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
CCDC38-202ENST00000546386 WDR62O43379 1518 aa18■□□□□ 0.47
CCDC38-202ENST00000546386 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
CCDC38-202ENST00000546386 CUL7Q14999 1698 aa17.99■□□□□ 0.47
CCDC38-202ENST00000546386 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
CCDC38-202ENST00000546386 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
CCDC38-202ENST00000546386 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
CCDC38-202ENST00000546386 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
CCDC38-202ENST00000546386 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
CCDC38-202ENST00000546386 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
CCDC38-202ENST00000546386 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
CCDC38-202ENST00000546386 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
CCDC38-202ENST00000546386 CTTNBP2Q8WZ74 1663 aa17.92■□□□□ 0.46
CCDC38-202ENST00000546386 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
CCDC38-202ENST00000546386 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
CCDC38-202ENST00000546386 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
CCDC38-202ENST00000546386 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
CCDC38-202ENST00000546386 TIAM1Q13009 1591 aa17.87■□□□□ 0.45
CCDC38-202ENST00000546386 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
CCDC38-202ENST00000546386 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
CCDC38-202ENST00000546386 GRIN2AQ12879 1464 aa17.83■□□□□ 0.44
CCDC38-202ENST00000546386 FMN1Q68DA7 1419 aa17.83■□□□□ 0.44
CCDC38-202ENST00000546386 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
CCDC38-202ENST00000546386 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
CCDC38-202ENST00000546386 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
CCDC38-202ENST00000546386 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
CCDC38-202ENST00000546386 FYCO1Q9BQS8 1478 aa17.76■□□□□ 0.43
CCDC38-202ENST00000546386 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
CCDC38-202ENST00000546386 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
CCDC38-202ENST00000546386 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
CCDC38-202ENST00000546386 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
CCDC38-202ENST00000546386 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
CCDC38-202ENST00000546386 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
CCDC38-202ENST00000546386 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
CCDC38-202ENST00000546386 ZNF777Q9ULD5 760 aaPredicted RBP17.73■□□□□ 0.43
CCDC38-202ENST00000546386 ZNF644Q9H582 1327 aaPredicted RBP17.72■□□□□ 0.43
CCDC38-202ENST00000546386 DISP1Q96F81 1524 aa17.72■□□□□ 0.43
CCDC38-202ENST00000546386 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
CCDC38-202ENST00000546386 PLB1Q6P1J6 1458 aa17.72■□□□□ 0.43
CCDC38-202ENST00000546386 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
CCDC38-202ENST00000546386 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
CCDC38-202ENST00000546386 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
CCDC38-202ENST00000546386 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
CCDC38-202ENST00000546386 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
CCDC38-202ENST00000546386 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
CCDC38-202ENST00000546386 EPRSP07814 1512 aaKnown RBP17.65■□□□□ 0.42
CCDC38-202ENST00000546386 CFAP43Q8NDM7 1665 aa17.64■□□□□ 0.41
CCDC38-202ENST00000546386 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
CCDC38-202ENST00000546386 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
CCDC38-202ENST00000546386 FGD6Q6ZV73 1430 aa17.62■□□□□ 0.41
CCDC38-202ENST00000546386 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
CCDC38-202ENST00000546386 UGGT2Q9NYU1 1516 aa17.61■□□□□ 0.41
CCDC38-202ENST00000546386 ADRA2BP18089 450 aa17.6■□□□□ 0.41
CCDC38-202ENST00000546386 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
CCDC38-202ENST00000546386 NUP153P49790 1475 aaKnown RBP17.59■□□□□ 0.41
CCDC38-202ENST00000546386 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
CCDC38-202ENST00000546386 NUP160Q12769 1436 aa17.57■□□□□ 0.4
CCDC38-202ENST00000546386 FOXD1Q16676 465 aa17.56■□□□□ 0.4
CCDC38-202ENST00000546386 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
CCDC38-202ENST00000546386 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
CCDC38-202ENST00000546386 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
CCDC38-202ENST00000546386 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
CCDC38-202ENST00000546386 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
CCDC38-202ENST00000546386 ERCC6L2Q5T890 1561 aa17.54■□□□□ 0.4
CCDC38-202ENST00000546386 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
CCDC38-202ENST00000546386 CHD1O14646 1710 aa17.52■□□□□ 0.4
CCDC38-202ENST00000546386 HECW1Q76N89 1606 aa17.52■□□□□ 0.39
CCDC38-202ENST00000546386 PTPRGP23470 1445 aa17.52■□□□□ 0.39
CCDC38-202ENST00000546386 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
CCDC38-202ENST00000546386 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
CCDC38-202ENST00000546386 PLEKHD1A6NEE1 506 aa17.51■□□□□ 0.39
CCDC38-202ENST00000546386 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
CCDC38-202ENST00000546386 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
CCDC38-202ENST00000546386 RAPGEF6Q8TEU7 1601 aa17.48■□□□□ 0.39
CCDC38-202ENST00000546386 SUPT6HQ7KZ85 1726 aaKnown RBP17.48■□□□□ 0.39
CCDC38-202ENST00000546386 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
CCDC38-202ENST00000546386 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC38-202ENST00000546386 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
CCDC38-202ENST00000546386 ATP10BO94823 1461 aa17.42■□□□□ 0.38
CCDC38-202ENST00000546386 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
CCDC38-202ENST00000546386 KIF14Q15058 1648 aa17.41■□□□□ 0.38
CCDC38-202ENST00000546386 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
CCDC38-202ENST00000546386 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
CCDC38-202ENST00000546386 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
CCDC38-202ENST00000546386 NAIPQ13075 1403 aa17.38■□□□□ 0.37
CCDC38-202ENST00000546386 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
CCDC38-202ENST00000546386 KDM6BO15054 1643 aa17.35■□□□□ 0.37
CCDC38-202ENST00000546386 MIER1Q8N108 512 aa17.33■□□□□ 0.36
CCDC38-202ENST00000546386 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms