RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CTTNBP2Q8WZ74 1663 aa26.84■■□□□ 1.89
LIMS2-217ENST00000545738 GOLGA3Q08378 1498 aa26.83■■□□□ 1.89
LIMS2-217ENST00000545738 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
LIMS2-217ENST00000545738 IQGAP2Q13576 1575 aa26.79■■□□□ 1.88
LIMS2-217ENST00000545738 DNAJC5Q9H3Z4 198 aa26.76■■□□□ 1.88
LIMS2-217ENST00000545738 ERCC6L2Q5T890 1561 aa26.76■■□□□ 1.87
LIMS2-217ENST00000545738 JPH4Q96JJ6 628 aa26.72■■□□□ 1.87
LIMS2-217ENST00000545738 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
LIMS2-217ENST00000545738 ARHGEF11O15085 1522 aa26.7■■□□□ 1.86
LIMS2-217ENST00000545738 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
LIMS2-217ENST00000545738 RIMBP3CA6NJZ7 1639 aa26.67■■□□□ 1.86
LIMS2-217ENST00000545738 RIMBP3BA6NNM3 1639 aa26.67■■□□□ 1.86
LIMS2-217ENST00000545738 RIMBP3Q9UFD9 1639 aa26.67■■□□□ 1.86
LIMS2-217ENST00000545738 PRG4Q92954 1404 aaPredicted RBP26.66■■□□□ 1.86
LIMS2-217ENST00000545738 UGGT2Q9NYU1 1516 aa26.65■■□□□ 1.86
LIMS2-217ENST00000545738 DISP1Q96F81 1524 aa26.63■■□□□ 1.85
LIMS2-217ENST00000545738 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
LIMS2-217ENST00000545738 TNIKQ9UKE5 1360 aa26.57■■□□□ 1.84
LIMS2-217ENST00000545738 KIAA0556O60303 1618 aa26.56■■□□□ 1.84
LIMS2-217ENST00000545738 SAMD9Q5K651 1589 aa26.54■■□□□ 1.84
LIMS2-217ENST00000545738 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
LIMS2-217ENST00000545738 CARMIL2Q6F5E8 1435 aa26.47■■□□□ 1.83
LIMS2-217ENST00000545738 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
LIMS2-217ENST00000545738 P3H3Q8IVL6 736 aa26.45■■□□□ 1.83
LIMS2-217ENST00000545738 EFCAB5A4FU69 1503 aa26.42■■□□□ 1.82
LIMS2-217ENST00000545738 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
LIMS2-217ENST00000545738 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
LIMS2-217ENST00000545738 TTBK1Q5TCY1 1321 aaPredicted RBP26.39■■□□□ 1.81
LIMS2-217ENST00000545738 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
LIMS2-217ENST00000545738 CLIP1P30622 1438 aa26.37■■□□□ 1.81
LIMS2-217ENST00000545738 PTPRGP23470 1445 aa26.35■■□□□ 1.81
LIMS2-217ENST00000545738 PLB1Q6P1J6 1458 aa26.28■■□□□ 1.8
LIMS2-217ENST00000545738 ADCY10Q96PN6 1610 aa26.27■■□□□ 1.8
LIMS2-217ENST00000545738 ABCA8O94911 1581 aa26.24■■□□□ 1.79
LIMS2-217ENST00000545738 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
LIMS2-217ENST00000545738 ABCC2Q92887 1545 aa26.18■■□□□ 1.78
LIMS2-217ENST00000545738 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
LIMS2-217ENST00000545738 UHRF1BP1LA0JNW5 1464 aa26.16■■□□□ 1.78
LIMS2-217ENST00000545738 FMN1Q68DA7 1419 aa26.14■■□□□ 1.78
LIMS2-217ENST00000545738 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
LIMS2-217ENST00000545738 NUP153P49790 1475 aaKnown RBP26.11■■□□□ 1.77
LIMS2-217ENST00000545738 LRRIQ1Q96JM4 1722 aa26.08■■□□□ 1.77
LIMS2-217ENST00000545738 ARID3CA6NKF2 412 aa26.07■■□□□ 1.76
LIMS2-217ENST00000545738 KDM5BQ9UGL1 1544 aa26.07■■□□□ 1.76
LIMS2-217ENST00000545738 ZCCHC11Q5TAX3 1644 aaKnown RBP26.05■■□□□ 1.76
LIMS2-217ENST00000545738 CASKIN1Q8WXD9 1431 aa26.04■■□□□ 1.76
LIMS2-217ENST00000545738 VPS8Q8N3P4 1428 aa26.02■■□□□ 1.76
LIMS2-217ENST00000545738 ATP10BO94823 1461 aa26.02■■□□□ 1.76
LIMS2-217ENST00000545738 HECW1Q76N89 1606 aa26.01■■□□□ 1.75
LIMS2-217ENST00000545738 CDK13Q14004 1512 aaKnown RBP26■■□□□ 1.75
LIMS2-217ENST00000545738 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
LIMS2-217ENST00000545738 EPRSP07814 1512 aaKnown RBP25.97■■□□□ 1.75
LIMS2-217ENST00000545738 ATP1B4Q9UN42 357 aaPredicted RBP25.96■■□□□ 1.75
LIMS2-217ENST00000545738 MAPKBP1O60336 1514 aa25.94■■□□□ 1.74
LIMS2-217ENST00000545738 ASXL2Q76L83 1435 aa25.9■■□□□ 1.74
LIMS2-217ENST00000545738 NPM1P06748 294 aaKnown RBP eCLIP25.89■■□□□ 1.74
LIMS2-217ENST00000545738 MAGI3Q5TCQ9 1506 aa25.86■■□□□ 1.73
LIMS2-217ENST00000545738 CCDC18Q5T9S5 1454 aa25.84■■□□□ 1.73
LIMS2-217ENST00000545738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.83■■□□□ 1.73
LIMS2-217ENST00000545738 HNRNPUL2Q1KMD3 747 aaKnown RBP25.83■■□□□ 1.73
LIMS2-217ENST00000545738 WDR7Q9Y4E6 1490 aa25.82■■□□□ 1.72
LIMS2-217ENST00000545738 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
LIMS2-217ENST00000545738 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
LIMS2-217ENST00000545738 DIP2BQ9P265 1576 aa25.78■■□□□ 1.72
LIMS2-217ENST00000545738 KIF13AQ9H1H9 1805 aa25.78■■□□□ 1.72
LIMS2-217ENST00000545738 ABCC10Q5T3U5 1492 aa25.76■■□□□ 1.71
LIMS2-217ENST00000545738 KIF14Q15058 1648 aa25.72■■□□□ 1.71
LIMS2-217ENST00000545738 PLEKHD1A6NEE1 506 aa25.71■■□□□ 1.71
LIMS2-217ENST00000545738 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
LIMS2-217ENST00000545738 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
LIMS2-217ENST00000545738 MAP3K1Q13233 1512 aa25.69■■□□□ 1.7
LIMS2-217ENST00000545738 KANK4Q5T7N3 995 aaPredicted RBP25.69■■□□□ 1.7
LIMS2-217ENST00000545738 GLI2P10070 1586 aa25.66■■□□□ 1.7
LIMS2-217ENST00000545738 FAM69CQ0P6D2 419 aa25.66■■□□□ 1.7
LIMS2-217ENST00000545738 LRRC9Q6ZRR7 1453 aa25.65■■□□□ 1.7
LIMS2-217ENST00000545738 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
LIMS2-217ENST00000545738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.65■■□□□ 1.7
LIMS2-217ENST00000545738 CDK11AQ9UQ88 783 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-217ENST00000545738 TRHP20396 242 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-217ENST00000545738 ABCA9Q8IUA7 1624 aa25.63■■□□□ 1.69
LIMS2-217ENST00000545738 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
LIMS2-217ENST00000545738 MAP3K4Q9Y6R4 1608 aa25.62■■□□□ 1.69
LIMS2-217ENST00000545738 MTUS2Q5JR59 1369 aa25.62■■□□□ 1.69
LIMS2-217ENST00000545738 PPRC1Q5VV67 1664 aaKnown RBP25.58■■□□□ 1.69
LIMS2-217ENST00000545738 TSPOAP1O95153 1857 aa25.57■■□□□ 1.68
LIMS2-217ENST00000545738 APLP2Q06481 763 aa25.54■■□□□ 1.68
LIMS2-217ENST00000545738 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
LIMS2-217ENST00000545738 CD109Q6YHK3 1445 aa25.52■■□□□ 1.68
LIMS2-217ENST00000545738 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
LIMS2-217ENST00000545738 NCOA2Q15596 1464 aa25.52■■□□□ 1.68
LIMS2-217ENST00000545738 CDC42BPAQ5VT25 1732 aa25.49■■□□□ 1.67
LIMS2-217ENST00000545738 MYO5CQ9NQX4 1742 aa25.47■■□□□ 1.67
LIMS2-217ENST00000545738 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
LIMS2-217ENST00000545738 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.67
LIMS2-217ENST00000545738 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
LIMS2-217ENST00000545738 PLCH2O75038 1416 aa25.43■■□□□ 1.66
LIMS2-217ENST00000545738 PHLDB1Q86UU1 1377 aa25.41■■□□□ 1.66
LIMS2-217ENST00000545738 CCNB3Q8WWL7 1395 aa25.39■■□□□ 1.65
LIMS2-217ENST00000545738 ARAP3Q8WWN8 1544 aa25.38■■□□□ 1.65
LIMS2-217ENST00000545738 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms