RNA–Protein interactions for RNA: ENST00000544752.6

GPHN-205, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 2,514 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-205ENST00000544752 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
GPHN-205ENST00000544752 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
GPHN-205ENST00000544752 DNMBPQ6XZF7 1577 aa9.66□□□□□ -0.86
GPHN-205ENST00000544752 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
GPHN-205ENST00000544752 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
GPHN-205ENST00000544752 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
GPHN-205ENST00000544752 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
GPHN-205ENST00000544752 HOMEZQ8IX15 550 aa9.61□□□□□ -0.87
GPHN-205ENST00000544752 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
GPHN-205ENST00000544752 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
GPHN-205ENST00000544752 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
GPHN-205ENST00000544752 PROM2Q8N271 834 aa9.53□□□□□ -0.88
GPHN-205ENST00000544752 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
GPHN-205ENST00000544752 EIF4G3O43432 1585 aaKnown RBP9.51□□□□□ -0.89
GPHN-205ENST00000544752 POLA1P09884 1462 aaPredicted RBP9.51□□□□□ -0.89
GPHN-205ENST00000544752 NBR1Q14596 966 aa9.51□□□□□ -0.89
GPHN-205ENST00000544752 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
GPHN-205ENST00000544752 OSCARQ8IYS5 282 aa9.5□□□□□ -0.89
GPHN-205ENST00000544752 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 MYT1Q01538 1121 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 CUX1P39880 1505 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 SOGA1O94964 1423 aa9.47□□□□□ -0.89
GPHN-205ENST00000544752 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
GPHN-205ENST00000544752 BIVM-ERCC5R4GMW8 1640 aa9.47□□□□□ -0.89
GPHN-205ENST00000544752 RGL2O15211 777 aa9.47□□□□□ -0.89
GPHN-205ENST00000544752 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.89
GPHN-205ENST00000544752 FGD5Q6ZNL6 1462 aa9.45□□□□□ -0.9
GPHN-205ENST00000544752 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
GPHN-205ENST00000544752 TRIM41Q8WV44 630 aa9.44□□□□□ -0.9
GPHN-205ENST00000544752 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
GPHN-205ENST00000544752 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
GPHN-205ENST00000544752 TOP2BQ02880 1626 aa9.44□□□□□ -0.9
GPHN-205ENST00000544752 MSH5O43196 834 aa9.43□□□□□ -0.9
GPHN-205ENST00000544752 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
GPHN-205ENST00000544752 CHD1O14646 1710 aa9.42□□□□□ -0.9
GPHN-205ENST00000544752 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
GPHN-205ENST00000544752 PBRM1Q86U86 1689 aa9.41□□□□□ -0.9
GPHN-205ENST00000544752 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
GPHN-205ENST00000544752 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.91
GPHN-205ENST00000544752 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.91
GPHN-205ENST00000544752 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
GPHN-205ENST00000544752 RAD54L2Q9Y4B4 1467 aa9.39□□□□□ -0.91
GPHN-205ENST00000544752 SYNJ1O43426 1573 aa9.39□□□□□ -0.91
GPHN-205ENST00000544752 SYNJ2O15056 1496 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
GPHN-205ENST00000544752 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 GAPVD1Q14C86 1478 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
GPHN-205ENST00000544752 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
GPHN-205ENST00000544752 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
GPHN-205ENST00000544752 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
GPHN-205ENST00000544752 ARHGEF11O15085 1522 aa9.34□□□□□ -0.91
GPHN-205ENST00000544752 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
GPHN-205ENST00000544752 SAMD1Q6SPF0 538 aaPredicted RBP9.33□□□□□ -0.92
GPHN-205ENST00000544752 CHGAP10645 457 aaKnown RBP9.33□□□□□ -0.92
GPHN-205ENST00000544752 U3KPZ7 1027 aaPredicted RBP9.33□□□□□ -0.92
GPHN-205ENST00000544752 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
GPHN-205ENST00000544752 FHAD1B1AJZ9 1412 aa9.3□□□□□ -0.92
GPHN-205ENST00000544752 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
GPHN-205ENST00000544752 SPOCK2Q92563 424 aa9.29□□□□□ -0.92
GPHN-205ENST00000544752 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
GPHN-205ENST00000544752 NUP160Q12769 1436 aa9.28□□□□□ -0.92
GPHN-205ENST00000544752 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
GPHN-205ENST00000544752 SHROOM2Q13796 1616 aa9.27□□□□□ -0.92
GPHN-205ENST00000544752 CUL7Q14999 1698 aa9.27□□□□□ -0.93
GPHN-205ENST00000544752 TTBK1Q5TCY1 1321 aaPredicted RBP9.26□□□□□ -0.93
GPHN-205ENST00000544752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.26□□□□□ -0.93
GPHN-205ENST00000544752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
GPHN-205ENST00000544752 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
GPHN-205ENST00000544752 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
GPHN-205ENST00000544752 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
GPHN-205ENST00000544752 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
GPHN-205ENST00000544752 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
GPHN-205ENST00000544752 CEP170Q5SW79 1584 aa9.22□□□□□ -0.93
GPHN-205ENST00000544752 TRHP20396 242 aaPredicted RBP9.17□□□□□ -0.94
GPHN-205ENST00000544752 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
GPHN-205ENST00000544752 RUSC2Q8N2Y8 1516 aa9.17□□□□□ -0.94
GPHN-205ENST00000544752 IGF1RP08069 1367 aa9.17□□□□□ -0.94
GPHN-205ENST00000544752 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
GPHN-205ENST00000544752 KIAA0586Q9BVV6 1533 aa9.16□□□□□ -0.94
GPHN-205ENST00000544752 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
GPHN-205ENST00000544752 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
GPHN-205ENST00000544752 CYB5RLQ6IPT4 315 aa9.14□□□□□ -0.95
GPHN-205ENST00000544752 CARMIL1Q5VZK9 1371 aa9.1□□□□□ -0.95
GPHN-205ENST00000544752 PRG4Q92954 1404 aaPredicted RBP9.09□□□□□ -0.95
GPHN-205ENST00000544752 HRCP23327 699 aa9.09□□□□□ -0.95
GPHN-205ENST00000544752 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
GPHN-205ENST00000544752 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
GPHN-205ENST00000544752 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
GPHN-205ENST00000544752 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 CIZ1Q9ULV3 898 aaPredicted RBP9.07□□□□□ -0.96
GPHN-205ENST00000544752 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 RAPGEF2Q9Y4G8 1499 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 NPM2Q86SE8 214 aaKnown RBP9.07□□□□□ -0.96
GPHN-205ENST00000544752 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 UGGT2Q9NYU1 1516 aa9.06□□□□□ -0.96
GPHN-205ENST00000544752 CARMIL2Q6F5E8 1435 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms