RNA–Protein interactions for RNA: ENST00000544752.6

GPHN-205, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 2,514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-205ENST00000544752 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
GPHN-205ENST00000544752 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
GPHN-205ENST00000544752 DNMBPQ6XZF7 1577 aa9.66□□□□□ -0.86
GPHN-205ENST00000544752 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
GPHN-205ENST00000544752 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
GPHN-205ENST00000544752 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
GPHN-205ENST00000544752 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
GPHN-205ENST00000544752 HOMEZQ8IX15 550 aa9.61□□□□□ -0.87
GPHN-205ENST00000544752 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
GPHN-205ENST00000544752 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
GPHN-205ENST00000544752 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
GPHN-205ENST00000544752 PROM2Q8N271 834 aa9.53□□□□□ -0.88
GPHN-205ENST00000544752 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
GPHN-205ENST00000544752 EIF4G3O43432 1585 aaKnown RBP9.51□□□□□ -0.89
GPHN-205ENST00000544752 POLA1P09884 1462 aaPredicted RBP9.51□□□□□ -0.89
GPHN-205ENST00000544752 NBR1Q14596 966 aa9.51□□□□□ -0.89
GPHN-205ENST00000544752 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
GPHN-205ENST00000544752 OSCARQ8IYS5 282 aa9.5□□□□□ -0.89
GPHN-205ENST00000544752 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 MYT1Q01538 1121 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 CUX1P39880 1505 aa9.48□□□□□ -0.89
GPHN-205ENST00000544752 SOGA1O94964 1423 aa9.47□□□□□ -0.89
GPHN-205ENST00000544752 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
GPHN-205ENST00000544752 BIVM-ERCC5R4GMW8 1640 aa9.47□□□□□ -0.89
GPHN-205ENST00000544752 RGL2O15211 777 aa9.47□□□□□ -0.89
GPHN-205ENST00000544752 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.89
GPHN-205ENST00000544752 FGD5Q6ZNL6 1462 aa9.45□□□□□ -0.9
GPHN-205ENST00000544752 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
GPHN-205ENST00000544752 TRIM41Q8WV44 630 aa9.44□□□□□ -0.9
GPHN-205ENST00000544752 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
GPHN-205ENST00000544752 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
GPHN-205ENST00000544752 TOP2BQ02880 1626 aa9.44□□□□□ -0.9
GPHN-205ENST00000544752 MSH5O43196 834 aa9.43□□□□□ -0.9
GPHN-205ENST00000544752 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
GPHN-205ENST00000544752 CHD1O14646 1710 aa9.42□□□□□ -0.9
GPHN-205ENST00000544752 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
GPHN-205ENST00000544752 PBRM1Q86U86 1689 aa9.41□□□□□ -0.9
GPHN-205ENST00000544752 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
GPHN-205ENST00000544752 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.91
GPHN-205ENST00000544752 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.91
GPHN-205ENST00000544752 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
GPHN-205ENST00000544752 RAD54L2Q9Y4B4 1467 aa9.39□□□□□ -0.91
GPHN-205ENST00000544752 SYNJ1O43426 1573 aa9.39□□□□□ -0.91
GPHN-205ENST00000544752 SYNJ2O15056 1496 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
GPHN-205ENST00000544752 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 GAPVD1Q14C86 1478 aa9.38□□□□□ -0.91
GPHN-205ENST00000544752 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
GPHN-205ENST00000544752 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
GPHN-205ENST00000544752 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
GPHN-205ENST00000544752 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
GPHN-205ENST00000544752 ARHGEF11O15085 1522 aa9.34□□□□□ -0.91
GPHN-205ENST00000544752 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
GPHN-205ENST00000544752 SAMD1Q6SPF0 538 aaPredicted RBP9.33□□□□□ -0.92
GPHN-205ENST00000544752 CHGAP10645 457 aaKnown RBP9.33□□□□□ -0.92
GPHN-205ENST00000544752 U3KPZ7 1027 aaPredicted RBP9.33□□□□□ -0.92
GPHN-205ENST00000544752 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
GPHN-205ENST00000544752 FHAD1B1AJZ9 1412 aa9.3□□□□□ -0.92
GPHN-205ENST00000544752 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
GPHN-205ENST00000544752 SPOCK2Q92563 424 aa9.29□□□□□ -0.92
GPHN-205ENST00000544752 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
GPHN-205ENST00000544752 NUP160Q12769 1436 aa9.28□□□□□ -0.92
GPHN-205ENST00000544752 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
GPHN-205ENST00000544752 SHROOM2Q13796 1616 aa9.27□□□□□ -0.92
GPHN-205ENST00000544752 CUL7Q14999 1698 aa9.27□□□□□ -0.93
GPHN-205ENST00000544752 TTBK1Q5TCY1 1321 aaPredicted RBP9.26□□□□□ -0.93
GPHN-205ENST00000544752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.26□□□□□ -0.93
GPHN-205ENST00000544752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
GPHN-205ENST00000544752 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
GPHN-205ENST00000544752 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
GPHN-205ENST00000544752 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
GPHN-205ENST00000544752 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
GPHN-205ENST00000544752 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
GPHN-205ENST00000544752 CEP170Q5SW79 1584 aa9.22□□□□□ -0.93
GPHN-205ENST00000544752 TRHP20396 242 aaPredicted RBP9.17□□□□□ -0.94
GPHN-205ENST00000544752 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
GPHN-205ENST00000544752 RUSC2Q8N2Y8 1516 aa9.17□□□□□ -0.94
GPHN-205ENST00000544752 IGF1RP08069 1367 aa9.17□□□□□ -0.94
GPHN-205ENST00000544752 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
GPHN-205ENST00000544752 KIAA0586Q9BVV6 1533 aa9.16□□□□□ -0.94
GPHN-205ENST00000544752 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
GPHN-205ENST00000544752 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
GPHN-205ENST00000544752 CYB5RLQ6IPT4 315 aa9.14□□□□□ -0.95
GPHN-205ENST00000544752 CARMIL1Q5VZK9 1371 aa9.1□□□□□ -0.95
GPHN-205ENST00000544752 PRG4Q92954 1404 aaPredicted RBP9.09□□□□□ -0.95
GPHN-205ENST00000544752 HRCP23327 699 aa9.09□□□□□ -0.95
GPHN-205ENST00000544752 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
GPHN-205ENST00000544752 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
GPHN-205ENST00000544752 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
GPHN-205ENST00000544752 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 CIZ1Q9ULV3 898 aaPredicted RBP9.07□□□□□ -0.96
GPHN-205ENST00000544752 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 RAPGEF2Q9Y4G8 1499 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 NPM2Q86SE8 214 aaKnown RBP9.07□□□□□ -0.96
GPHN-205ENST00000544752 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
GPHN-205ENST00000544752 UGGT2Q9NYU1 1516 aa9.06□□□□□ -0.96
GPHN-205ENST00000544752 CARMIL2Q6F5E8 1435 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms