RNA–Protein interactions for RNA: ENST00000544692.5

POLE-220, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 5

Gene POLE, Length 2,221 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-220ENST00000544692 LRRC9Q6ZRR7 1453 aa31.38■■■□□ 2.61
POLE-220ENST00000544692 PCF11O94913 1555 aaKnown RBP31.38■■■□□ 2.61
POLE-220ENST00000544692 ITGAEP38570 1179 aa31.37■■■□□ 2.61
POLE-220ENST00000544692 FHOD3Q2V2M9 1422 aa31.37■■■□□ 2.61
POLE-220ENST00000544692 SCAF1Q9H7N4 1312 aaKnown RBP31.36■■■□□ 2.61
POLE-220ENST00000544692 CLSPNQ9HAW4 1339 aa31.36■■■□□ 2.61
POLE-220ENST00000544692 PDS5BQ9NTI5 1447 aa31.36■■■□□ 2.61
POLE-220ENST00000544692 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
POLE-220ENST00000544692 CTTNBP2Q8WZ74 1663 aa31.31■■■□□ 2.6
POLE-220ENST00000544692 ATP1B4Q9UN42 357 aaPredicted RBP31.3■■■□□ 2.6
POLE-220ENST00000544692 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
POLE-220ENST00000544692 CFAP43Q8NDM7 1665 aa31.29■■■□□ 2.6
POLE-220ENST00000544692 ABCA5Q8WWZ7 1642 aa31.28■■■□□ 2.6
POLE-220ENST00000544692 PHLDB1Q86UU1 1377 aa31.28■■■□□ 2.6
POLE-220ENST00000544692 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
POLE-220ENST00000544692 GAPVD1Q14C86 1478 aa31.24■■■□□ 2.59
POLE-220ENST00000544692 FYCO1Q9BQS8 1478 aa31.22■■■□□ 2.59
POLE-220ENST00000544692 ACIN1Q9UKV3 1341 aaKnown RBP31.21■■■□□ 2.59
POLE-220ENST00000544692 NEUROD1Q13562 356 aa31.2■■■□□ 2.59
POLE-220ENST00000544692 CASKIN1Q8WXD9 1431 aa31.19■■■□□ 2.58
POLE-220ENST00000544692 RAB3GAP2Q9H2M9 1393 aa31.16■■■□□ 2.58
POLE-220ENST00000544692 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.589e-7■■■■□ 19.8
POLE-220ENST00000544692 FAM50AQ14320 339 aaKnown RBP31.12■■■□□ 2.57
POLE-220ENST00000544692 FMN1Q68DA7 1419 aa31.1■■■□□ 2.57
POLE-220ENST00000544692 TARBP1Q13395 1621 aaKnown RBP31.1■■■□□ 2.57
POLE-220ENST00000544692 MIER1Q8N108 512 aa31.08■■■□□ 2.57
POLE-220ENST00000544692 SNAPC4Q5SXM2 1469 aa31.07■■■□□ 2.56
POLE-220ENST00000544692 CENPBP07199 599 aaPredicted RBP31.07■■■□□ 2.56
POLE-220ENST00000544692 SAMD9Q5K651 1589 aa31.06■■■□□ 2.56
POLE-220ENST00000544692 SETD5Q9C0A6 1442 aa31.05■■■□□ 2.56
POLE-220ENST00000544692 MAPKBP1O60336 1514 aa30.99■■■□□ 2.55
POLE-220ENST00000544692 LRRIQ1Q96JM4 1722 aa30.92■■■□□ 2.54
POLE-220ENST00000544692 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
POLE-220ENST00000544692 YTHDC1Q96MU7 727 aaKnown RBP30.92■■■□□ 2.54
POLE-220ENST00000544692 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
POLE-220ENST00000544692 MTUS2Q5JR59 1369 aa30.9■■■□□ 2.54
POLE-220ENST00000544692 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
POLE-220ENST00000544692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.88■■■□□ 2.53
POLE-220ENST00000544692 FGD6Q6ZV73 1430 aa30.88■■■□□ 2.53
POLE-220ENST00000544692 GTF3C3Q9Y5Q9 886 aa30.82■■■□□ 2.52
POLE-220ENST00000544692 ADAMTS12P58397 1594 aa30.81■■■□□ 2.52
POLE-220ENST00000544692 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
POLE-220ENST00000544692 NCOA2Q15596 1464 aa30.78■■■□□ 2.52
POLE-220ENST00000544692 IQGAP2Q13576 1575 aa30.76■■■□□ 2.51
POLE-220ENST00000544692 SIN3AQ96ST3 1273 aa30.75■■■□□ 2.51
POLE-220ENST00000544692 ZNF608Q9ULD9 1512 aaPredicted RBP30.72■■■□□ 2.51
POLE-220ENST00000544692 EHBP1L1Q8N3D4 1523 aa30.71■■■□□ 2.51
POLE-220ENST00000544692 PTPRKQ15262 1439 aa30.71■■■□□ 2.51
POLE-220ENST00000544692 MYOM3Q5VTT5 1437 aa30.71■■■□□ 2.51
POLE-220ENST00000544692 SUPT6HQ7KZ85 1726 aaKnown RBP30.7■■■□□ 2.51
POLE-220ENST00000544692 MAGI3Q5TCQ9 1506 aa30.7■■■□□ 2.5
POLE-220ENST00000544692 IFT140Q96RY7 1462 aa30.68■■■□□ 2.5
POLE-220ENST00000544692 WDR62O43379 1518 aa30.66■■■□□ 2.5
POLE-220ENST00000544692 CCDC18Q5T9S5 1454 aa30.65■■■□□ 2.5
POLE-220ENST00000544692 UGGT2Q9NYU1 1516 aa30.63■■■□□ 2.49
POLE-220ENST00000544692 HECW1Q76N89 1606 aa30.63■■■□□ 2.49
POLE-220ENST00000544692 ARHGEF11O15085 1522 aa30.61■■■□□ 2.49
POLE-220ENST00000544692 HFM1A2PYH4 1435 aa30.61■■■□□ 2.49
POLE-220ENST00000544692 EPRSP07814 1512 aaKnown RBP30.58■■■□□ 2.49
POLE-220ENST00000544692 PTPN23Q9H3S7 1636 aa30.58■■■□□ 2.49
POLE-220ENST00000544692 CDK13Q14004 1512 aaKnown RBP30.55■■■□□ 2.48
POLE-220ENST00000544692 NAIPQ13075 1403 aa30.54■■■□□ 2.48
POLE-220ENST00000544692 ARID3CA6NKF2 412 aa30.54■■■□□ 2.48
POLE-220ENST00000544692 TIMELESSQ9UNS1 1208 aa30.51■■■□□ 2.48
POLE-220ENST00000544692 UACAQ9BZF9 1416 aa30.5■■■□□ 2.47
POLE-220ENST00000544692 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
POLE-220ENST00000544692 KIAA0586Q9BVV6 1533 aa30.48■■■□□ 2.47
POLE-220ENST00000544692 ERCC6Q03468 1493 aa30.45■■■□□ 2.47
POLE-220ENST00000544692 TCOF1Q13428 1488 aaKnown RBP30.45■■■□□ 2.47
POLE-220ENST00000544692 DISP1Q96F81 1524 aa30.45■■■□□ 2.47
POLE-220ENST00000544692 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
POLE-220ENST00000544692 KIAA0556O60303 1618 aa30.43■■■□□ 2.46
POLE-220ENST00000544692 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
POLE-220ENST00000544692 CHIC2Q9UKJ5 165 aa30.41■■■□□ 2.46
POLE-220ENST00000544692 RRP7BPQ9NSQ0 103 aa30.4■■■□□ 2.46
POLE-220ENST00000544692 TONSLQ96HA7 1378 aa30.35■■■□□ 2.45
POLE-220ENST00000544692 MIA2Q96PC5 1412 aa30.34■■■□□ 2.45
POLE-220ENST00000544692 NUP153P49790 1475 aaKnown RBP30.32■■■□□ 2.44
POLE-220ENST00000544692 GCC2Q8IWJ2 1684 aa30.3■■■□□ 2.44
POLE-220ENST00000544692 HIRIP3Q9BW71 556 aaPredicted RBP30.3■■■□□ 2.44
POLE-220ENST00000544692 MAGI1Q96QZ7 1491 aaPredicted RBP30.29■■■□□ 2.44
POLE-220ENST00000544692 DDX10Q13206 875 aaKnown RBP30.28■■■□□ 2.44
POLE-220ENST00000544692 RAPGEF6Q8TEU7 1601 aa30.28■■■□□ 2.44
POLE-220ENST00000544692 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
POLE-220ENST00000544692 KDM6BO15054 1643 aa30.27■■■□□ 2.44
POLE-220ENST00000544692 CEP170Q5SW79 1584 aa30.26■■■□□ 2.43
POLE-220ENST00000544692 AKNAQ7Z591 1439 aa30.25■■■□□ 2.43
POLE-220ENST00000544692 SYNJ2O15056 1496 aa30.24■■■□□ 2.43
POLE-220ENST00000544692 FBLN2P98095 1184 aa30.23■■■□□ 2.43
POLE-220ENST00000544692 DENND4BO75064 1496 aaPredicted RBP30.21■■■□□ 2.43
POLE-220ENST00000544692 KCNH8Q96L42 1107 aa30.21■■■□□ 2.43
POLE-220ENST00000544692 TRIM52Q96A61 297 aa30.2■■■□□ 2.43
POLE-220ENST00000544692 PELP1Q8IZL8 1130 aaKnown RBP30.19■■■□□ 2.42
POLE-220ENST00000544692 ZNF644Q9H582 1327 aaPredicted RBP30.16■■■□□ 2.42
POLE-220ENST00000544692 KDM5BQ9UGL1 1544 aa30.16■■■□□ 2.42
POLE-220ENST00000544692 DAPK1P53355 1430 aa30.15■■■□□ 2.42
POLE-220ENST00000544692 CDK11AQ9UQ88 783 aaPredicted RBP30.15■■■□□ 2.42
POLE-220ENST00000544692 PLB1Q6P1J6 1458 aa30.15■■■□□ 2.42
POLE-220ENST00000544692 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
POLE-220ENST00000544692 ABCC5O15440 1437 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms