RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 KIF21BO75037 1637 aa20.79■□□□□ 0.92
RDX-218ENST00000544551 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
RDX-218ENST00000544551 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
RDX-218ENST00000544551 FOXD1Q16676 465 aa20.76■□□□□ 0.91
RDX-218ENST00000544551 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
RDX-218ENST00000544551 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
RDX-218ENST00000544551 FHOD3Q2V2M9 1422 aa20.73■□□□□ 0.91
RDX-218ENST00000544551 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
RDX-218ENST00000544551 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
RDX-218ENST00000544551 IGF1RP08069 1367 aa20.72■□□□□ 0.91
RDX-218ENST00000544551 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
RDX-218ENST00000544551 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
RDX-218ENST00000544551 SALL2Q9Y467 1007 aaPredicted RBP20.64■□□□□ 0.89
RDX-218ENST00000544551 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
RDX-218ENST00000544551 KDM2AQ9Y2K7 1162 aa20.62■□□□□ 0.89
RDX-218ENST00000544551 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
RDX-218ENST00000544551 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
RDX-218ENST00000544551 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
RDX-218ENST00000544551 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.89
RDX-218ENST00000544551 MYT1Q01538 1121 aa20.58■□□□□ 0.88
RDX-218ENST00000544551 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.88
RDX-218ENST00000544551 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
RDX-218ENST00000544551 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
RDX-218ENST00000544551 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
RDX-218ENST00000544551 PRXQ9BXM0 1461 aa20.55■□□□□ 0.88
RDX-218ENST00000544551 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
RDX-218ENST00000544551 EIF4G2P78344 907 aaKnown RBP eCLIP20.55■□□□□ 0.881e-35■■■■■ 36.1
RDX-218ENST00000544551 CUX1P39880 1505 aa20.54■□□□□ 0.88
RDX-218ENST00000544551 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
RDX-218ENST00000544551 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
RDX-218ENST00000544551 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
RDX-218ENST00000544551 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
RDX-218ENST00000544551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.876e-8■■■□□ 16.9
RDX-218ENST00000544551 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
RDX-218ENST00000544551 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
RDX-218ENST00000544551 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
RDX-218ENST00000544551 CFTRP13569 1480 aa20.43■□□□□ 0.86
RDX-218ENST00000544551 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
RDX-218ENST00000544551 NESP48681 1621 aa20.42■□□□□ 0.86
RDX-218ENST00000544551 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
RDX-218ENST00000544551 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
RDX-218ENST00000544551 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
RDX-218ENST00000544551 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
RDX-218ENST00000544551 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
RDX-218ENST00000544551 LRRC9Q6ZRR7 1453 aa20.34■□□□□ 0.85
RDX-218ENST00000544551 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
RDX-218ENST00000544551 TSPY4P0CV99 314 aa20.33■□□□□ 0.84
RDX-218ENST00000544551 TSPY10P0CW01 314 aa20.33■□□□□ 0.84
RDX-218ENST00000544551 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
RDX-218ENST00000544551 ZNF644Q9H582 1327 aaPredicted RBP20.31■□□□□ 0.84
RDX-218ENST00000544551 FMN1Q68DA7 1419 aa20.3■□□□□ 0.84
RDX-218ENST00000544551 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
RDX-218ENST00000544551 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
RDX-218ENST00000544551 SENP3Q9H4L4 574 aaPredicted RBP20.28■□□□□ 0.84
RDX-218ENST00000544551 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
RDX-218ENST00000544551 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.83
RDX-218ENST00000544551 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
RDX-218ENST00000544551 CCER2I3L3R5 266 aa20.24■□□□□ 0.83
RDX-218ENST00000544551 PKD2Q13563 968 aa20.22■□□□□ 0.83
RDX-218ENST00000544551 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
RDX-218ENST00000544551 CARD11Q9BXL7 1154 aa20.21■□□□□ 0.83
RDX-218ENST00000544551 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
RDX-218ENST00000544551 CCDC18Q5T9S5 1454 aa20.2■□□□□ 0.82
RDX-218ENST00000544551 FGD6Q6ZV73 1430 aa20.2■□□□□ 0.82
RDX-218ENST00000544551 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
RDX-218ENST00000544551 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
RDX-218ENST00000544551 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
RDX-218ENST00000544551 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
RDX-218ENST00000544551 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
RDX-218ENST00000544551 CCDC184Q52MB2 194 aa20.14■□□□□ 0.82
RDX-218ENST00000544551 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
RDX-218ENST00000544551 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
RDX-218ENST00000544551 NBR1Q14596 966 aa20.13■□□□□ 0.81
RDX-218ENST00000544551 ANP32EQ9BTT0 268 aa20.13■□□□□ 0.81
RDX-218ENST00000544551 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
RDX-218ENST00000544551 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
RDX-218ENST00000544551 WASHC2AQ641Q2 1341 aa20.1■□□□□ 0.81
RDX-218ENST00000544551 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
RDX-218ENST00000544551 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.81
RDX-218ENST00000544551 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.8
RDX-218ENST00000544551 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
RDX-218ENST00000544551 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
RDX-218ENST00000544551 CC2D1BQ5T0F9 858 aaKnown RBP20.06■□□□□ 0.8
RDX-218ENST00000544551 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
RDX-218ENST00000544551 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
RDX-218ENST00000544551 PRKRIP1Q9H875 184 aaPredicted RBP20.04■□□□□ 0.8
RDX-218ENST00000544551 NBPF8Q3BBV2 869 aa20.03■□□□□ 0.8
RDX-218ENST00000544551 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
RDX-218ENST00000544551 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
RDX-218ENST00000544551 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
RDX-218ENST00000544551 NUP155O75694 1391 aa20.02■□□□□ 0.8
RDX-218ENST00000544551 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.79
RDX-218ENST00000544551 UACAQ9BZF9 1416 aa20.01■□□□□ 0.79
RDX-218ENST00000544551 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
RDX-218ENST00000544551 PCF11O94913 1555 aaKnown RBP20■□□□□ 0.79
RDX-218ENST00000544551 RTL5Q5HYW3 569 aaPredicted RBP19.99■□□□□ 0.79
RDX-218ENST00000544551 BCL11AQ9H165 835 aa19.98■□□□□ 0.79
RDX-218ENST00000544551 PTPRKQ15262 1439 aa19.96■□□□□ 0.79
RDX-218ENST00000544551 ST20-MTHFSA0A0A6YYL1 179 aa19.96■□□□□ 0.79
RDX-218ENST00000544551 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms