RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
SSPN-208ENST00000544231 CTTNBP2Q8WZ74 1663 aa23.81■■□□□ 1.4
SSPN-208ENST00000544231 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
SSPN-208ENST00000544231 IQGAP2Q13576 1575 aa23.81■■□□□ 1.4
SSPN-208ENST00000544231 JPH4Q96JJ6 628 aa23.76■■□□□ 1.39
SSPN-208ENST00000544231 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
SSPN-208ENST00000544231 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
SSPN-208ENST00000544231 TNIKQ9UKE5 1360 aa23.69■■□□□ 1.38
SSPN-208ENST00000544231 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
SSPN-208ENST00000544231 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
SSPN-208ENST00000544231 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
SSPN-208ENST00000544231 LOC105371045A0A1W2PR82 267 aa23.64■■□□□ 1.37
SSPN-208ENST00000544231 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
SSPN-208ENST00000544231 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.36
SSPN-208ENST00000544231 RANGAP1P46060 587 aaPredicted RBP23.57■■□□□ 1.36
SSPN-208ENST00000544231 DISP1Q96F81 1524 aa23.57■■□□□ 1.36
SSPN-208ENST00000544231 RIMBP3CA6NJZ7 1639 aa23.56■■□□□ 1.36
SSPN-208ENST00000544231 RIMBP3BA6NNM3 1639 aa23.56■■□□□ 1.36
SSPN-208ENST00000544231 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
SSPN-208ENST00000544231 RIMBP3Q9UFD9 1639 aa23.56■■□□□ 1.36
SSPN-208ENST00000544231 ERCC6L2Q5T890 1561 aa23.54■■□□□ 1.36
SSPN-208ENST00000544231 SAMD9Q5K651 1589 aa23.53■■□□□ 1.36
SSPN-208ENST00000544231 CLIP1P30622 1438 aa23.5■■□□□ 1.35
SSPN-208ENST00000544231 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
SSPN-208ENST00000544231 PTPRGP23470 1445 aa23.47■■□□□ 1.35
SSPN-208ENST00000544231 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
SSPN-208ENST00000544231 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
SSPN-208ENST00000544231 ARHGAP35Q9NRY4 1499 aa23.45■■□□□ 1.34
SSPN-208ENST00000544231 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
SSPN-208ENST00000544231 TTBK1Q5TCY1 1321 aaPredicted RBP23.41■■□□□ 1.34
SSPN-208ENST00000544231 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
SSPN-208ENST00000544231 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
SSPN-208ENST00000544231 UACAQ9BZF9 1416 aa23.33■■□□□ 1.32
SSPN-208ENST00000544231 UHRF1BP1LA0JNW5 1464 aa23.28■■□□□ 1.32
SSPN-208ENST00000544231 PLB1Q6P1J6 1458 aa23.27■■□□□ 1.32
SSPN-208ENST00000544231 ABCC2Q92887 1545 aa23.27■■□□□ 1.32
SSPN-208ENST00000544231 ABCA8O94911 1581 aa23.27■■□□□ 1.32
SSPN-208ENST00000544231 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
SSPN-208ENST00000544231 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
SSPN-208ENST00000544231 NPM1P06748 294 aaKnown RBP eCLIP23.21■■□□□ 1.31
SSPN-208ENST00000544231 CASKIN1Q8WXD9 1431 aa23.19■■□□□ 1.3
SSPN-208ENST00000544231 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
SSPN-208ENST00000544231 HECW1Q76N89 1606 aa23.18■■□□□ 1.3
SSPN-208ENST00000544231 FYCO1Q9BQS8 1478 aa23.17■■□□□ 1.3
SSPN-208ENST00000544231 ATP1B4Q9UN42 357 aaPredicted RBP23.16■■□□□ 1.3
SSPN-208ENST00000544231 PCF11O94913 1555 aaKnown RBP23.15■■□□□ 1.3
SSPN-208ENST00000544231 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
SSPN-208ENST00000544231 KDM5BQ9UGL1 1544 aa23.14■■□□□ 1.3
SSPN-208ENST00000544231 CCDC18Q5T9S5 1454 aa23.09■■□□□ 1.29
SSPN-208ENST00000544231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
SSPN-208ENST00000544231 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
SSPN-208ENST00000544231 ATP10BO94823 1461 aa23.08■■□□□ 1.29
SSPN-208ENST00000544231 ZCCHC11Q5TAX3 1644 aaKnown RBP23.08■■□□□ 1.28
SSPN-208ENST00000544231 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.28
SSPN-208ENST00000544231 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
SSPN-208ENST00000544231 MAPKBP1O60336 1514 aa23.04■■□□□ 1.28
SSPN-208ENST00000544231 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
SSPN-208ENST00000544231 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
SSPN-208ENST00000544231 APLP2Q06481 763 aa23■■□□□ 1.27
SSPN-208ENST00000544231 ASXL2Q76L83 1435 aa22.99■■□□□ 1.27
SSPN-208ENST00000544231 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
SSPN-208ENST00000544231 WDR7Q9Y4E6 1490 aa22.97■■□□□ 1.27
SSPN-208ENST00000544231 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
SSPN-208ENST00000544231 MAP3K1Q13233 1512 aa22.94■■□□□ 1.26
SSPN-208ENST00000544231 TIAM1Q13009 1591 aa22.91■■□□□ 1.26
SSPN-208ENST00000544231 CFAP43Q8NDM7 1665 aa22.9■■□□□ 1.26
SSPN-208ENST00000544231 TROQ12816 1431 aaPredicted RBP22.9■■□□□ 1.26
SSPN-208ENST00000544231 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
SSPN-208ENST00000544231 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
SSPN-208ENST00000544231 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
SSPN-208ENST00000544231 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
SSPN-208ENST00000544231 DIP2BQ9P265 1576 aa22.83■■□□□ 1.25
SSPN-208ENST00000544231 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
SSPN-208ENST00000544231 FAM69CQ0P6D2 419 aa22.82■■□□□ 1.24
SSPN-208ENST00000544231 GLI2P10070 1586 aa22.81■■□□□ 1.24
SSPN-208ENST00000544231 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
SSPN-208ENST00000544231 KIF14Q15058 1648 aa22.81■■□□□ 1.24
SSPN-208ENST00000544231 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
SSPN-208ENST00000544231 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
SSPN-208ENST00000544231 ABCA9Q8IUA7 1624 aa22.74■■□□□ 1.23
SSPN-208ENST00000544231 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
SSPN-208ENST00000544231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.23
SSPN-208ENST00000544231 SUPT6HQ7KZ85 1726 aaKnown RBP22.72■■□□□ 1.23
SSPN-208ENST00000544231 CD109Q6YHK3 1445 aa22.71■■□□□ 1.23
SSPN-208ENST00000544231 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
SSPN-208ENST00000544231 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
SSPN-208ENST00000544231 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
SSPN-208ENST00000544231 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
SSPN-208ENST00000544231 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.21
SSPN-208ENST00000544231 MYO5CQ9NQX4 1742 aa22.63■■□□□ 1.21
SSPN-208ENST00000544231 PLCH2O75038 1416 aa22.63■■□□□ 1.21
SSPN-208ENST00000544231 ARAP3Q8WWN8 1544 aa22.62■■□□□ 1.21
SSPN-208ENST00000544231 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
SSPN-208ENST00000544231 PREX2Q70Z35 1606 aa22.59■■□□□ 1.21
SSPN-208ENST00000544231 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
SSPN-208ENST00000544231 TSPOAP1O95153 1857 aa22.58■■□□□ 1.21
SSPN-208ENST00000544231 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
SSPN-208ENST00000544231 EFCAB2Q5VUJ9 269 aa22.58■■□□□ 1.21
SSPN-208ENST00000544231 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
SSPN-208ENST00000544231 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms