RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 PPP4R3CPQ6ZMV5 832 aa15.56■□□□□ 0.08
SP140-214ENST00000544128 ILDR1Q86SU0 546 aaPredicted RBP15.55■□□□□ 0.08
SP140-214ENST00000544128 FBLN2P98095 1184 aa15.54■□□□□ 0.08
SP140-214ENST00000544128 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
SP140-214ENST00000544128 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
SP140-214ENST00000544128 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
SP140-214ENST00000544128 CUL7Q14999 1698 aa15.51■□□□□ 0.07
SP140-214ENST00000544128 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
SP140-214ENST00000544128 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
SP140-214ENST00000544128 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
SP140-214ENST00000544128 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
SP140-214ENST00000544128 LOC105371045A0A1W2PR82 267 aa15.48■□□□□ 0.07
SP140-214ENST00000544128 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
SP140-214ENST00000544128 KIF21BO75037 1637 aa15.47■□□□□ 0.07
SP140-214ENST00000544128 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
SP140-214ENST00000544128 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
SP140-214ENST00000544128 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
SP140-214ENST00000544128 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
SP140-214ENST00000544128 UBTFP17480 764 aaKnown RBP15.42■□□□□ 0.06
SP140-214ENST00000544128 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
SP140-214ENST00000544128 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
SP140-214ENST00000544128 TNIKQ9UKE5 1360 aa15.32■□□□□ 0.04
SP140-214ENST00000544128 NUP160Q12769 1436 aa15.3■□□□□ 0.04
SP140-214ENST00000544128 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
SP140-214ENST00000544128 CTTNBP2Q8WZ74 1663 aa15.3■□□□□ 0.04
SP140-214ENST00000544128 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
SP140-214ENST00000544128 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
SP140-214ENST00000544128 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
SP140-214ENST00000544128 KIF13AQ9H1H9 1805 aa15.23■□□□□ 0.03
SP140-214ENST00000544128 KDM4FA0A1W2PPD8 638 aa15.22■□□□□ 0.03
SP140-214ENST00000544128 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
SP140-214ENST00000544128 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
SP140-214ENST00000544128 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
SP140-214ENST00000544128 CLIP1P30622 1438 aa15.18■□□□□ 0.02
SP140-214ENST00000544128 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
SP140-214ENST00000544128 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
SP140-214ENST00000544128 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
SP140-214ENST00000544128 ARHGAP35Q9NRY4 1499 aa15.13■□□□□ 0.01
SP140-214ENST00000544128 PRG4Q92954 1404 aaPredicted RBP15.12■□□□□ 0.01
SP140-214ENST00000544128 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
SP140-214ENST00000544128 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
SP140-214ENST00000544128 DISP1Q96F81 1524 aa15.11■□□□□ 0.01
SP140-214ENST00000544128 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
SP140-214ENST00000544128 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
SP140-214ENST00000544128 MSH5O43196 834 aa15.09■□□□□ 0.01
SP140-214ENST00000544128 FHOD3Q2V2M9 1422 aa15.09■□□□□ 0.01
SP140-214ENST00000544128 KIAA0556O60303 1618 aa15.08■□□□□ 0
SP140-214ENST00000544128 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
SP140-214ENST00000544128 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
SP140-214ENST00000544128 KDM6BO15054 1643 aa15□□□□□ -0.01
SP140-214ENST00000544128 PTPRGP23470 1445 aa14.99□□□□□ -0.01
SP140-214ENST00000544128 ZBTB22O15209 634 aa14.98□□□□□ -0.01
SP140-214ENST00000544128 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
SP140-214ENST00000544128 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
SP140-214ENST00000544128 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
SP140-214ENST00000544128 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
SP140-214ENST00000544128 TSPOAP1O95153 1857 aa14.95□□□□□ -0.02
SP140-214ENST00000544128 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
SP140-214ENST00000544128 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
SP140-214ENST00000544128 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
SP140-214ENST00000544128 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
SP140-214ENST00000544128 DIP2BQ9P265 1576 aa14.92□□□□□ -0.02
SP140-214ENST00000544128 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
SP140-214ENST00000544128 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
SP140-214ENST00000544128 UACAQ9BZF9 1416 aa14.89□□□□□ -0.03
SP140-214ENST00000544128 ABCA8O94911 1581 aa14.89□□□□□ -0.03
SP140-214ENST00000544128 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
SP140-214ENST00000544128 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
SP140-214ENST00000544128 FBXO41Q8TF61 875 aa14.88□□□□□ -0.03
SP140-214ENST00000544128 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
SP140-214ENST00000544128 APLP2Q06481 763 aa14.87□□□□□ -0.03
SP140-214ENST00000544128 HECW1Q76N89 1606 aa14.87□□□□□ -0.03
SP140-214ENST00000544128 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
SP140-214ENST00000544128 NUP153P49790 1475 aaKnown RBP14.85□□□□□ -0.03
SP140-214ENST00000544128 MAPKBP1O60336 1514 aa14.85□□□□□ -0.03
SP140-214ENST00000544128 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
SP140-214ENST00000544128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
SP140-214ENST00000544128 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
SP140-214ENST00000544128 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.04
SP140-214ENST00000544128 UHRF1BP1LA0JNW5 1464 aa14.82□□□□□ -0.04
SP140-214ENST00000544128 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
SP140-214ENST00000544128 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
SP140-214ENST00000544128 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
SP140-214ENST00000544128 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
SP140-214ENST00000544128 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
SP140-214ENST00000544128 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
SP140-214ENST00000544128 CCDC18Q5T9S5 1454 aa14.8□□□□□ -0.04
SP140-214ENST00000544128 ATP10BO94823 1461 aa14.79□□□□□ -0.04
SP140-214ENST00000544128 TIAM1Q13009 1591 aa14.79□□□□□ -0.04
SP140-214ENST00000544128 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
SP140-214ENST00000544128 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
SP140-214ENST00000544128 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
SP140-214ENST00000544128 ZCCHC11Q5TAX3 1644 aaKnown RBP14.76□□□□□ -0.05
SP140-214ENST00000544128 KDM5BQ9UGL1 1544 aa14.76□□□□□ -0.05
SP140-214ENST00000544128 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
SP140-214ENST00000544128 CDK11AQ9UQ88 783 aaPredicted RBP14.74□□□□□ -0.05
SP140-214ENST00000544128 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
SP140-214ENST00000544128 LMTK3Q96Q04 1460 aa14.73□□□□□ -0.05
SP140-214ENST00000544128 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
SP140-214ENST00000544128 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms