RNA–Protein interactions for RNA: ENST00000543756.5

DDX11-226, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-226ENST00000543756 SHROOM2Q13796 1616 aa28.55■■■□□ 2.16
DDX11-226ENST00000543756 ARHGEF11O15085 1522 aa28.51■■■□□ 2.15
DDX11-226ENST00000543756 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
DDX11-226ENST00000543756 JPH4Q96JJ6 628 aa28.47■■■□□ 2.15
DDX11-226ENST00000543756 GOLGA3Q08378 1498 aa28.45■■■□□ 2.14
DDX11-226ENST00000543756 CTTNBP2Q8WZ74 1663 aa28.43■■■□□ 2.14
DDX11-226ENST00000543756 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
DDX11-226ENST00000543756 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
DDX11-226ENST00000543756 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
DDX11-226ENST00000543756 PRG4Q92954 1404 aaPredicted RBP28.39■■■□□ 2.14
DDX11-226ENST00000543756 UGGT2Q9NYU1 1516 aa28.38■■■□□ 2.13
DDX11-226ENST00000543756 ERCC6L2Q5T890 1561 aa28.31■■■□□ 2.12
DDX11-226ENST00000543756 CARMIL2Q6F5E8 1435 aa28.3■■■□□ 2.12
DDX11-226ENST00000543756 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
DDX11-226ENST00000543756 DISP1Q96F81 1524 aa28.27■■■□□ 2.12
DDX11-226ENST00000543756 UBTFP17480 764 aaKnown RBP28.24■■■□□ 2.11
DDX11-226ENST00000543756 KIAA0556O60303 1618 aa28.21■■■□□ 2.11
DDX11-226ENST00000543756 TNIKQ9UKE5 1360 aa28.18■■■□□ 2.1
DDX11-226ENST00000543756 SAMD9Q5K651 1589 aa28.16■■■□□ 2.1
DDX11-226ENST00000543756 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
DDX11-226ENST00000543756 EFCAB5A4FU69 1503 aa28.13■■■□□ 2.09
DDX11-226ENST00000543756 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
DDX11-226ENST00000543756 PTPRGP23470 1445 aa28.1■■■□□ 2.09
DDX11-226ENST00000543756 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
DDX11-226ENST00000543756 UHRF1BP1LA0JNW5 1464 aa27.96■■■□□ 2.07
DDX11-226ENST00000543756 UACAQ9BZF9 1416 aa27.95■■■□□ 2.07
DDX11-226ENST00000543756 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
DDX11-226ENST00000543756 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
DDX11-226ENST00000543756 FHOD3Q2V2M9 1422 aa27.93■■■□□ 2.06
DDX11-226ENST00000543756 P3H3Q8IVL6 736 aa27.92■■■□□ 2.06
DDX11-226ENST00000543756 CLIP1P30622 1438 aa27.92■■■□□ 2.06
DDX11-226ENST00000543756 ADCY10Q96PN6 1610 aa27.91■■■□□ 2.06
DDX11-226ENST00000543756 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
DDX11-226ENST00000543756 ABCA8O94911 1581 aa27.89■■■□□ 2.05
DDX11-226ENST00000543756 CEP162Q5TB80 1403 aa27.87■■■□□ 2.05
DDX11-226ENST00000543756 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
DDX11-226ENST00000543756 FMN1Q68DA7 1419 aa27.86■■■□□ 2.05
DDX11-226ENST00000543756 PLB1Q6P1J6 1458 aa27.86■■■□□ 2.05
DDX11-226ENST00000543756 KDM5BQ9UGL1 1544 aa27.81■■■□□ 2.04
DDX11-226ENST00000543756 NPM1P06748 294 aaKnown RBP eCLIP27.78■■■□□ 2.04
DDX11-226ENST00000543756 RAPGEF6Q8TEU7 1601 aa27.78■■■□□ 2.04
DDX11-226ENST00000543756 MAPKBP1O60336 1514 aa27.75■■■□□ 2.03
DDX11-226ENST00000543756 NUP153P49790 1475 aaKnown RBP27.7■■■□□ 2.03
DDX11-226ENST00000543756 ZCCHC11Q5TAX3 1644 aaKnown RBP27.67■■■□□ 2.02
DDX11-226ENST00000543756 CASKIN1Q8WXD9 1431 aa27.67■■■□□ 2.02
DDX11-226ENST00000543756 HECW1Q76N89 1606 aa27.65■■■□□ 2.02
DDX11-226ENST00000543756 ATP10BO94823 1461 aa27.64■■■□□ 2.02
DDX11-226ENST00000543756 FYCO1Q9BQS8 1478 aa27.63■■■□□ 2.01
DDX11-226ENST00000543756 ASXL2Q76L83 1435 aa27.6■■■□□ 2.01
DDX11-226ENST00000543756 PCF11O94913 1555 aaKnown RBP27.59■■■□□ 2.01
DDX11-226ENST00000543756 EPRSP07814 1512 aaKnown RBP27.57■■■□□ 2
DDX11-226ENST00000543756 VPS8Q8N3P4 1428 aa27.55■■■□□ 2
DDX11-226ENST00000543756 ABCC10Q5T3U5 1492 aa27.55■■■□□ 2
DDX11-226ENST00000543756 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
DDX11-226ENST00000543756 CCDC18Q5T9S5 1454 aa27.53■■■□□ 2
DDX11-226ENST00000543756 DIP2BQ9P265 1576 aa27.48■■□□□ 1.99
DDX11-226ENST00000543756 CDK13Q14004 1512 aaKnown RBP27.47■■□□□ 1.99
DDX11-226ENST00000543756 ARID3CA6NKF2 412 aa27.47■■□□□ 1.99
DDX11-226ENST00000543756 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
DDX11-226ENST00000543756 GLI2P10070 1586 aa27.46■■□□□ 1.99
DDX11-226ENST00000543756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.45■■□□□ 1.98
DDX11-226ENST00000543756 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.98
DDX11-226ENST00000543756 TRHP20396 242 aaPredicted RBP27.43■■□□□ 1.98
DDX11-226ENST00000543756 CDK11AQ9UQ88 783 aaPredicted RBP27.43■■□□□ 1.98
DDX11-226ENST00000543756 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
DDX11-226ENST00000543756 PLEKHD1A6NEE1 506 aa27.42■■□□□ 1.98
DDX11-226ENST00000543756 FAM69CQ0P6D2 419 aa27.39■■□□□ 1.98
DDX11-226ENST00000543756 KIF13AQ9H1H9 1805 aa27.39■■□□□ 1.97
DDX11-226ENST00000543756 TROQ12816 1431 aaPredicted RBP27.34■■□□□ 1.97
DDX11-226ENST00000543756 MAP3K1Q13233 1512 aa27.34■■□□□ 1.97
DDX11-226ENST00000543756 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
DDX11-226ENST00000543756 MAP3K4Q9Y6R4 1608 aa27.3■■□□□ 1.96
DDX11-226ENST00000543756 ABCA9Q8IUA7 1624 aa27.29■■□□□ 1.96
DDX11-226ENST00000543756 CFAP43Q8NDM7 1665 aa27.28■■□□□ 1.96
DDX11-226ENST00000543756 TIAM1Q13009 1591 aa27.27■■□□□ 1.96
DDX11-226ENST00000543756 MAGI3Q5TCQ9 1506 aa27.26■■□□□ 1.96
DDX11-226ENST00000543756 KIF14Q15058 1648 aa27.23■■□□□ 1.95
DDX11-226ENST00000543756 CD109Q6YHK3 1445 aa27.23■■□□□ 1.95
DDX11-226ENST00000543756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.22■■□□□ 1.95
DDX11-226ENST00000543756 EHBP1L1Q8N3D4 1523 aa27.21■■□□□ 1.95
DDX11-226ENST00000543756 MTUS2Q5JR59 1369 aa27.21■■□□□ 1.95
DDX11-226ENST00000543756 TEX14Q8IWB6 1497 aa27.18■■□□□ 1.94
DDX11-226ENST00000543756 LRRC9Q6ZRR7 1453 aa27.17■■□□□ 1.94
DDX11-226ENST00000543756 TTC37Q6PGP7 1564 aa27.16■■□□□ 1.94
DDX11-226ENST00000543756 PPRC1Q5VV67 1664 aaKnown RBP27.16■■□□□ 1.94
DDX11-226ENST00000543756 APLP2Q06481 763 aa27.15■■□□□ 1.94
DDX11-226ENST00000543756 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
DDX11-226ENST00000543756 PLCH2O75038 1416 aa27.11■■□□□ 1.93
DDX11-226ENST00000543756 PHLDB1Q86UU1 1377 aa27.09■■□□□ 1.93
DDX11-226ENST00000543756 NEO1Q92859 1461 aa27.07■■□□□ 1.92
DDX11-226ENST00000543756 TSPOAP1O95153 1857 aa27.06■■□□□ 1.92
DDX11-226ENST00000543756 KANK4Q5T7N3 995 aaPredicted RBP27.05■■□□□ 1.92
DDX11-226ENST00000543756 SUPT6HQ7KZ85 1726 aaKnown RBP27.04■■□□□ 1.92
DDX11-226ENST00000543756 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
DDX11-226ENST00000543756 CFAP74Q9C0B2 1584 aa27.02■■□□□ 1.92
DDX11-226ENST00000543756 NCOA2Q15596 1464 aa27.02■■□□□ 1.92
DDX11-226ENST00000543756 FANCAO15360 1455 aa27.01■■□□□ 1.91
DDX11-226ENST00000543756 PREX2Q70Z35 1606 aa27.01■■□□□ 1.91
DDX11-226ENST00000543756 GPATCH8Q9UKJ3 1502 aaKnown RBP27■■□□□ 1.91
DDX11-226ENST00000543756 CCNB3Q8WWL7 1395 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms