RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
DDX11-225ENST00000543511 CHD1O14646 1710 aa17.89■□□□□ 0.46
DDX11-225ENST00000543511 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
DDX11-225ENST00000543511 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
DDX11-225ENST00000543511 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
DDX11-225ENST00000543511 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
DDX11-225ENST00000543511 CUL7Q14999 1698 aa17.81■□□□□ 0.44
DDX11-225ENST00000543511 IGF1RP08069 1367 aa17.79■□□□□ 0.44
DDX11-225ENST00000543511 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
DDX11-225ENST00000543511 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
DDX11-225ENST00000543511 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
DDX11-225ENST00000543511 EEA1Q15075 1411 aa17.71■□□□□ 0.43
DDX11-225ENST00000543511 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
DDX11-225ENST00000543511 CLASP1Q7Z460 1538 aa17.68■□□□□ 0.42
DDX11-225ENST00000543511 FBLN2P98095 1184 aa17.68■□□□□ 0.42
DDX11-225ENST00000543511 CEP170Q5SW79 1584 aa17.68■□□□□ 0.42
DDX11-225ENST00000543511 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
DDX11-225ENST00000543511 ATXN8OSP0DMR3 200 aa17.67■□□□□ 0.42
DDX11-225ENST00000543511 NUP160Q12769 1436 aa17.66■□□□□ 0.42
DDX11-225ENST00000543511 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
DDX11-225ENST00000543511 PRXQ9BXM0 1461 aa17.65■□□□□ 0.42
DDX11-225ENST00000543511 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
DDX11-225ENST00000543511 DNAJC5Q9H3Z4 198 aa17.59■□□□□ 0.41
DDX11-225ENST00000543511 KIF21BO75037 1637 aa17.58■□□□□ 0.4
DDX11-225ENST00000543511 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
DDX11-225ENST00000543511 SHROOM2Q13796 1616 aa17.56■□□□□ 0.4
DDX11-225ENST00000543511 CTTNBP2Q8WZ74 1663 aa17.55■□□□□ 0.4
DDX11-225ENST00000543511 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.39
DDX11-225ENST00000543511 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
DDX11-225ENST00000543511 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
DDX11-225ENST00000543511 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
DDX11-225ENST00000543511 IQGAP2Q13576 1575 aa17.49■□□□□ 0.39
DDX11-225ENST00000543511 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
DDX11-225ENST00000543511 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
DDX11-225ENST00000543511 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
DDX11-225ENST00000543511 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
DDX11-225ENST00000543511 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
DDX11-225ENST00000543511 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
DDX11-225ENST00000543511 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
DDX11-225ENST00000543511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX11-225ENST00000543511 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
DDX11-225ENST00000543511 DISP1Q96F81 1524 aa17.35■□□□□ 0.37
DDX11-225ENST00000543511 KIAA0556O60303 1618 aa17.34■□□□□ 0.37
DDX11-225ENST00000543511 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
DDX11-225ENST00000543511 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
DDX11-225ENST00000543511 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
DDX11-225ENST00000543511 FKBP8Q14318 412 aa17.27■□□□□ 0.36
DDX11-225ENST00000543511 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
DDX11-225ENST00000543511 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
DDX11-225ENST00000543511 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
DDX11-225ENST00000543511 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
DDX11-225ENST00000543511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
DDX11-225ENST00000543511 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
DDX11-225ENST00000543511 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
DDX11-225ENST00000543511 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
DDX11-225ENST00000543511 PTPRGP23470 1445 aa17.18■□□□□ 0.34
DDX11-225ENST00000543511 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
DDX11-225ENST00000543511 ADCY10Q96PN6 1610 aa17.18■□□□□ 0.34
DDX11-225ENST00000543511 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
DDX11-225ENST00000543511 LOC105371045A0A1W2PR82 267 aa17.15■□□□□ 0.34
DDX11-225ENST00000543511 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
DDX11-225ENST00000543511 ABCA8O94911 1581 aa17.14■□□□□ 0.33
DDX11-225ENST00000543511 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
DDX11-225ENST00000543511 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
DDX11-225ENST00000543511 CLIP1P30622 1438 aa17.11■□□□□ 0.33
DDX11-225ENST00000543511 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
DDX11-225ENST00000543511 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
DDX11-225ENST00000543511 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
DDX11-225ENST00000543511 PLB1Q6P1J6 1458 aa17.1■□□□□ 0.33
DDX11-225ENST00000543511 RAPGEF6Q8TEU7 1601 aa17.08■□□□□ 0.32
DDX11-225ENST00000543511 TTBK1Q5TCY1 1321 aaPredicted RBP17.08■□□□□ 0.32
DDX11-225ENST00000543511 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
DDX11-225ENST00000543511 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
DDX11-225ENST00000543511 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
DDX11-225ENST00000543511 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
DDX11-225ENST00000543511 FMN1Q68DA7 1419 aa17.02■□□□□ 0.31
DDX11-225ENST00000543511 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
DDX11-225ENST00000543511 MAPKBP1O60336 1514 aa17■□□□□ 0.31
DDX11-225ENST00000543511 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
DDX11-225ENST00000543511 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
DDX11-225ENST00000543511 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
DDX11-225ENST00000543511 ATP10BO94823 1461 aa16.94■□□□□ 0.3
DDX11-225ENST00000543511 CASKIN1Q8WXD9 1431 aa16.93■□□□□ 0.3
DDX11-225ENST00000543511 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
DDX11-225ENST00000543511 KIF13AQ9H1H9 1805 aa16.92■□□□□ 0.3
DDX11-225ENST00000543511 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
DDX11-225ENST00000543511 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
DDX11-225ENST00000543511 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX11-225ENST00000543511 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
DDX11-225ENST00000543511 DIP2BQ9P265 1576 aa16.89■□□□□ 0.3
DDX11-225ENST00000543511 VPS8Q8N3P4 1428 aa16.88■□□□□ 0.29
DDX11-225ENST00000543511 WDR7Q9Y4E6 1490 aa16.87■□□□□ 0.29
DDX11-225ENST00000543511 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
DDX11-225ENST00000543511 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
DDX11-225ENST00000543511 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
DDX11-225ENST00000543511 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
DDX11-225ENST00000543511 CFAP43Q8NDM7 1665 aa16.82■□□□□ 0.28
DDX11-225ENST00000543511 GLI2P10070 1586 aa16.82■□□□□ 0.28
DDX11-225ENST00000543511 APLP2Q06481 763 aa16.82■□□□□ 0.28
DDX11-225ENST00000543511 MAGI3Q5TCQ9 1506 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms