RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 RBM19Q9Y4C8 960 aaKnown RBP33.6■■■□□ 2.97
SHD-201ENST00000543264 HIRIP3Q9BW71 556 aaPredicted RBP33.59■■■□□ 2.97
SHD-201ENST00000543264 TRIM52Q96A61 297 aa33.58■■■□□ 2.97
SHD-201ENST00000543264 BCL11AQ9H165 835 aa33.58■■■□□ 2.97
SHD-201ENST00000543264 FAM50AQ14320 339 aaKnown RBP33.54■■■□□ 2.96
SHD-201ENST00000543264 ANP32CO43423 234 aa33.48■■■□□ 2.95
SHD-201ENST00000543264 TIAM1Q13009 1591 aa33.47■■■□□ 2.95
SHD-201ENST00000543264 CCER2I3L3R5 266 aa33.46■■■□□ 2.95
SHD-201ENST00000543264 PHLDB1Q86UU1 1377 aa33.44■■■□□ 2.94
SHD-201ENST00000543264 TIMELESSQ9UNS1 1208 aa33.4■■■□□ 2.94
SHD-201ENST00000543264 LRRC9Q6ZRR7 1453 aa33.39■■■□□ 2.94
SHD-201ENST00000543264 MAP3K1Q13233 1512 aa33.37■■■□□ 2.93
SHD-201ENST00000543264 ATP1B4Q9UN42 357 aaPredicted RBP33.32■■■□□ 2.93
SHD-201ENST00000543264 IGF1RP08069 1367 aa33.31■■■□□ 2.92
SHD-201ENST00000543264 P3H3Q8IVL6 736 aa33.25■■■□□ 2.91
SHD-201ENST00000543264 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.91
SHD-201ENST00000543264 MSH5O43196 834 aa33.2■■■□□ 2.91
SHD-201ENST00000543264 CFTRP13569 1480 aa33.2■■■□□ 2.9
SHD-201ENST00000543264 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
SHD-201ENST00000543264 FHAD1B1AJZ9 1412 aa33.15■■■□□ 2.9
SHD-201ENST00000543264 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
SHD-201ENST00000543264 TONSLQ96HA7 1378 aa33.15■■■□□ 2.9
SHD-201ENST00000543264 IRX6P78412 446 aaPredicted RBP33.11■■■□□ 2.89
SHD-201ENST00000543264 HNRNPUQ00839 825 aaKnown RBP eCLIP33.1■■■□□ 2.89
SHD-201ENST00000543264 PCF11O94913 1555 aaKnown RBP33.06■■■□□ 2.88
SHD-201ENST00000543264 CFAP43Q8NDM7 1665 aa33.06■■■□□ 2.88
SHD-201ENST00000543264 CDK11AQ9UQ88 783 aaPredicted RBP33.05■■■□□ 2.88
SHD-201ENST00000543264 FANCIQ9NVI1 1328 aa32.99■■■□□ 2.87
SHD-201ENST00000543264 FHOD3Q2V2M9 1422 aa32.97■■■□□ 2.87
SHD-201ENST00000543264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.95■■■□□ 2.87
SHD-201ENST00000543264 ERICH6Q7L0X2 663 aa32.95■■■□□ 2.87
SHD-201ENST00000543264 CCDC18Q5T9S5 1454 aa32.91■■■□□ 2.86
SHD-201ENST00000543264 FGD5Q6ZNL6 1462 aa32.91■■■□□ 2.86
SHD-201ENST00000543264 FGD6Q6ZV73 1430 aa32.86■■■□□ 2.85
SHD-201ENST00000543264 FYCO1Q9BQS8 1478 aa32.85■■■□□ 2.85
SHD-201ENST00000543264 UACAQ9BZF9 1416 aa32.85■■■□□ 2.85
SHD-201ENST00000543264 CASKIN1Q8WXD9 1431 aa32.83■■■□□ 2.85
SHD-201ENST00000543264 PTPRKQ15262 1439 aa32.81■■■□□ 2.84
SHD-201ENST00000543264 PRDM2Q13029 1718 aa32.79■■■□□ 2.84
SHD-201ENST00000543264 HFM1A2PYH4 1435 aa32.78■■■□□ 2.84
SHD-201ENST00000543264 WASHC2AQ641Q2 1341 aa32.78■■■□□ 2.84
SHD-201ENST00000543264 PPP4R2Q9NY27 417 aa32.76■■■□□ 2.84
SHD-201ENST00000543264 HSPA5P11021 654 aaKnown RBP32.76■■■□□ 2.83
SHD-201ENST00000543264 ERICH6BQ5W0A0 696 aa32.73■■■□□ 2.83
SHD-201ENST00000543264 MTUS2Q5JR59 1369 aa32.73■■■□□ 2.83
SHD-201ENST00000543264 PTPN23Q9H3S7 1636 aa32.73■■■□□ 2.83
SHD-201ENST00000543264 CADPSQ9ULU8 1353 aa32.72■■■□□ 2.83
SHD-201ENST00000543264 CCDC184Q52MB2 194 aa32.71■■■□□ 2.83
SHD-201ENST00000543264 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.83
SHD-201ENST00000543264 NAIPQ13075 1403 aa32.7■■■□□ 2.83
SHD-201ENST00000543264 KDM5BQ9UGL1 1544 aa32.68■■■□□ 2.82
SHD-201ENST00000543264 EFCAB5A4FU69 1503 aa32.68■■■□□ 2.82
SHD-201ENST00000543264 FAM9BQ8IZU0 186 aa32.64■■■□□ 2.82
SHD-201ENST00000543264 B4GALNT3Q6L9W6 998 aa32.64■■■□□ 2.81
SHD-201ENST00000543264 EIF4G2P78344 907 aaKnown RBP eCLIP32.63■■■□□ 2.81
SHD-201ENST00000543264 FMN1Q68DA7 1419 aa32.62■■■□□ 2.81
SHD-201ENST00000543264 RRP7BPQ9NSQ0 103 aa32.59■■■□□ 2.81
SHD-201ENST00000543264 RAD54L2Q9Y4B4 1467 aa32.57■■■□□ 2.8
SHD-201ENST00000543264 CHIC2Q9UKJ5 165 aa32.55■■■□□ 2.8
SHD-201ENST00000543264 CNTLNQ9NXG0 1405 aa32.54■■■□□ 2.8
SHD-201ENST00000543264 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
SHD-201ENST00000543264 MRS2Q9HD23 443 aa32.54■■■□□ 2.8
SHD-201ENST00000543264 MYOM3Q5VTT5 1437 aa32.54■■■□□ 2.8
SHD-201ENST00000543264 NCOA2Q15596 1464 aa32.53■■■□□ 2.8
SHD-201ENST00000543264 PRKRIP1Q9H875 184 aaPredicted RBP32.53■■■□□ 2.8
SHD-201ENST00000543264 C11orf95C9JLR9 678 aaPredicted RBP32.51■■■□□ 2.8
SHD-201ENST00000543264 MYT1LQ9UL68 1186 aa32.48■■■□□ 2.79
SHD-201ENST00000543264 CC2D2AQ9P2K1 1620 aa32.47■■■□□ 2.79
SHD-201ENST00000543264 CTTNBP2Q8WZ74 1663 aa32.46■■■□□ 2.79
SHD-201ENST00000543264 ZBED9Q6R2W3 1325 aa32.46■■■□□ 2.79
SHD-201ENST00000543264 DEKP35659 375 aaKnown RBP32.46■■■□□ 2.79
SHD-201ENST00000543264 L3MBTL2Q969R5 705 aa32.44■■■□□ 2.78
SHD-201ENST00000543264 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
SHD-201ENST00000543264 FANCD2Q9BXW9 1451 aa32.43■■■□□ 2.78
SHD-201ENST00000543264 CCDC7Q96M83 1385 aa32.42■■■□□ 2.78
SHD-201ENST00000543264 DENND4BO75064 1496 aaPredicted RBP32.4■■■□□ 2.78
SHD-201ENST00000543264 LRRIQ1Q96JM4 1722 aa32.39■■■□□ 2.78
SHD-201ENST00000543264 FOXD1Q16676 465 aa32.38■■■□□ 2.77
SHD-201ENST00000543264 SUPT6HQ7KZ85 1726 aaKnown RBP32.37■■■□□ 2.77
SHD-201ENST00000543264 MPHOSPH9Q99550 1183 aa32.37■■■□□ 2.77
SHD-201ENST00000543264 POLA1P09884 1462 aaPredicted RBP32.37■■■□□ 2.77
SHD-201ENST00000543264 CUL7Q14999 1698 aa32.36■■■□□ 2.77
SHD-201ENST00000543264 NCOA1Q15788 1441 aa32.36■■■□□ 2.77
SHD-201ENST00000543264 NOP58Q9Y2X3 529 aaKnown RBP32.36■■■□□ 2.77
SHD-201ENST00000543264 NBR1Q14596 966 aa32.32■■■□□ 2.76
SHD-201ENST00000543264 GRIN2BQ13224 1484 aa32.32■■■□□ 2.76
SHD-201ENST00000543264 DNMBPQ6XZF7 1577 aa32.31■■■□□ 2.76
SHD-201ENST00000543264 PAK3O75914 559 aaPredicted RBP32.3■■■□□ 2.76
SHD-201ENST00000543264 EHBP1L1Q8N3D4 1523 aa32.29■■■□□ 2.76
SHD-201ENST00000543264 HECW1Q76N89 1606 aa32.28■■■□□ 2.76
SHD-201ENST00000543264 TOPBP1Q92547 1522 aa32.28■■■□□ 2.76
SHD-201ENST00000543264 NBPF8Q3BBV2 869 aa32.27■■■□□ 2.76
SHD-201ENST00000543264 KDM6BO15054 1643 aa32.27■■■□□ 2.76
SHD-201ENST00000543264 UGGT2Q9NYU1 1516 aa32.27■■■□□ 2.76
SHD-201ENST00000543264 CNGB1Q14028 1251 aaPredicted RBP32.25■■■□□ 2.75
SHD-201ENST00000543264 KIF7Q2M1P5 1343 aa32.24■■■□□ 2.75
SHD-201ENST00000543264 SAMD9Q5K651 1589 aa32.24■■■□□ 2.75
SHD-201ENST00000543264 GCC2Q8IWJ2 1684 aa32.23■■■□□ 2.75
SHD-201ENST00000543264 AKNAQ7Z591 1439 aa32.21■■■□□ 2.75
SHD-201ENST00000543264 MAGI3Q5TCQ9 1506 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms