RNA–Protein interactions for RNA: ENST00000542236.5

BBS12-203, Transcript of Bardet-Biedl syndrome 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BBS12, Length 3,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS12-203ENST00000542236 BCANQ96GW7 911 aa12.36□□□□□ -0.43
BBS12-203ENST00000542236 WDR62O43379 1518 aa12.33□□□□□ -0.44
BBS12-203ENST00000542236 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
BBS12-203ENST00000542236 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
BBS12-203ENST00000542236 MAP3K1Q13233 1512 aa12.32□□□□□ -0.44
BBS12-203ENST00000542236 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
BBS12-203ENST00000542236 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
BBS12-203ENST00000542236 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
BBS12-203ENST00000542236 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
BBS12-203ENST00000542236 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.44
BBS12-203ENST00000542236 PBRM1Q86U86 1689 aa12.27□□□□□ -0.45
BBS12-203ENST00000542236 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
BBS12-203ENST00000542236 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
BBS12-203ENST00000542236 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
BBS12-203ENST00000542236 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
BBS12-203ENST00000542236 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
BBS12-203ENST00000542236 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
BBS12-203ENST00000542236 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
BBS12-203ENST00000542236 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
BBS12-203ENST00000542236 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
BBS12-203ENST00000542236 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
BBS12-203ENST00000542236 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
BBS12-203ENST00000542236 ITGAEP38570 1179 aa12.17□□□□□ -0.46
BBS12-203ENST00000542236 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
BBS12-203ENST00000542236 FHAD1B1AJZ9 1412 aa12.15□□□□□ -0.46
BBS12-203ENST00000542236 TIAM1Q13009 1591 aa12.14□□□□□ -0.47
BBS12-203ENST00000542236 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
BBS12-203ENST00000542236 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
BBS12-203ENST00000542236 MSH5O43196 834 aa12.12□□□□□ -0.47
BBS12-203ENST00000542236 FKBP8Q14318 412 aa12.12□□□□□ -0.47
BBS12-203ENST00000542236 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
BBS12-203ENST00000542236 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
BBS12-203ENST00000542236 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
BBS12-203ENST00000542236 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
BBS12-203ENST00000542236 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
BBS12-203ENST00000542236 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
BBS12-203ENST00000542236 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
BBS12-203ENST00000542236 UGGT2Q9NYU1 1516 aa12.07□□□□□ -0.48
BBS12-203ENST00000542236 MAGI1Q96QZ7 1491 aaPredicted RBP12.07□□□□□ -0.48
BBS12-203ENST00000542236 FMN1Q68DA7 1419 aa12.06□□□□□ -0.48
BBS12-203ENST00000542236 IQGAP2Q13576 1575 aa12.06□□□□□ -0.48
BBS12-203ENST00000542236 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
BBS12-203ENST00000542236 LRRC9Q6ZRR7 1453 aa12.04□□□□□ -0.48
BBS12-203ENST00000542236 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
BBS12-203ENST00000542236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.49
BBS12-203ENST00000542236 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
BBS12-203ENST00000542236 APLP2Q06481 763 aa12.01□□□□□ -0.49
BBS12-203ENST00000542236 KIAA0586Q9BVV6 1533 aa12□□□□□ -0.49
BBS12-203ENST00000542236 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
BBS12-203ENST00000542236 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
BBS12-203ENST00000542236 CCDC18Q5T9S5 1454 aa11.98□□□□□ -0.49
BBS12-203ENST00000542236 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
BBS12-203ENST00000542236 HECW1Q76N89 1606 aa11.98□□□□□ -0.49
BBS12-203ENST00000542236 ARHGEF11O15085 1522 aa11.97□□□□□ -0.49
BBS12-203ENST00000542236 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
BBS12-203ENST00000542236 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
BBS12-203ENST00000542236 KIAA0556O60303 1618 aa11.96□□□□□ -0.49
BBS12-203ENST00000542236 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
BBS12-203ENST00000542236 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
BBS12-203ENST00000542236 IRX6P78412 446 aaPredicted RBP11.95□□□□□ -0.5
BBS12-203ENST00000542236 NUP160Q12769 1436 aa11.94□□□□□ -0.5
BBS12-203ENST00000542236 EHBP1L1Q8N3D4 1523 aa11.94□□□□□ -0.5
BBS12-203ENST00000542236 HIRIP3Q9BW71 556 aaPredicted RBP11.93□□□□□ -0.5
BBS12-203ENST00000542236 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
BBS12-203ENST00000542236 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
BBS12-203ENST00000542236 DISP1Q96F81 1524 aa11.92□□□□□ -0.5
BBS12-203ENST00000542236 CCNB3Q8WWL7 1395 aa11.92□□□□□ -0.5
BBS12-203ENST00000542236 SUPT6HQ7KZ85 1726 aaKnown RBP11.91□□□□□ -0.5
BBS12-203ENST00000542236 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
BBS12-203ENST00000542236 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
BBS12-203ENST00000542236 RAPGEF6Q8TEU7 1601 aa11.86□□□□□ -0.51
BBS12-203ENST00000542236 DEKP35659 375 aaKnown RBP11.86□□□□□ -0.51
BBS12-203ENST00000542236 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
BBS12-203ENST00000542236 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
BBS12-203ENST00000542236 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
BBS12-203ENST00000542236 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
BBS12-203ENST00000542236 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
BBS12-203ENST00000542236 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
BBS12-203ENST00000542236 MAGI3Q5TCQ9 1506 aa11.83□□□□□ -0.52
BBS12-203ENST00000542236 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
BBS12-203ENST00000542236 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
BBS12-203ENST00000542236 NEFLP07196 543 aa11.82□□□□□ -0.52
BBS12-203ENST00000542236 NBR1Q14596 966 aa11.82□□□□□ -0.52
BBS12-203ENST00000542236 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
BBS12-203ENST00000542236 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
BBS12-203ENST00000542236 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
BBS12-203ENST00000542236 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
BBS12-203ENST00000542236 ABCA8O94911 1581 aa11.8□□□□□ -0.52
BBS12-203ENST00000542236 AKNAQ7Z591 1439 aa11.79□□□□□ -0.52
BBS12-203ENST00000542236 NUP153P49790 1475 aaKnown RBP11.78□□□□□ -0.52
BBS12-203ENST00000542236 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
BBS12-203ENST00000542236 CHD1O14646 1710 aa11.78□□□□□ -0.52
BBS12-203ENST00000542236 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.52
BBS12-203ENST00000542236 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
BBS12-203ENST00000542236 CARMIL2Q6F5E8 1435 aa11.76□□□□□ -0.53
BBS12-203ENST00000542236 ITSN2Q9NZM3 1697 aa11.75□□□□□ -0.53
BBS12-203ENST00000542236 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
BBS12-203ENST00000542236 SETD5Q9C0A6 1442 aa11.74□□□□□ -0.53
BBS12-203ENST00000542236 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
BBS12-203ENST00000542236 HFM1A2PYH4 1435 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms