RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 NUP160Q12769 1436 aa15.82■□□□□ 0.12
LDHC-207ENST00000541669 UBTFP17480 764 aaKnown RBP15.81■□□□□ 0.12
LDHC-207ENST00000541669 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
LDHC-207ENST00000541669 IQGAP2Q13576 1575 aa15.79■□□□□ 0.12
LDHC-207ENST00000541669 KIAA0586Q9BVV6 1533 aa15.77■□□□□ 0.12
LDHC-207ENST00000541669 CLASP1Q7Z460 1538 aa15.76■□□□□ 0.11
LDHC-207ENST00000541669 SHROOM2Q13796 1616 aa15.71■□□□□ 0.11
LDHC-207ENST00000541669 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
LDHC-207ENST00000541669 UGGT2Q9NYU1 1516 aa15.69■□□□□ 0.1
LDHC-207ENST00000541669 SAMD9Q5K651 1589 aa15.68■□□□□ 0.1
LDHC-207ENST00000541669 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
LDHC-207ENST00000541669 EFCAB5A4FU69 1503 aa15.67■□□□□ 0.1
LDHC-207ENST00000541669 CLIP1P30622 1438 aa15.64■□□□□ 0.09
LDHC-207ENST00000541669 KIAA0556O60303 1618 aa15.64■□□□□ 0.09
LDHC-207ENST00000541669 JPH4Q96JJ6 628 aa15.63■□□□□ 0.09
LDHC-207ENST00000541669 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
LDHC-207ENST00000541669 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
LDHC-207ENST00000541669 DISP1Q96F81 1524 aa15.61■□□□□ 0.09
LDHC-207ENST00000541669 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
LDHC-207ENST00000541669 PRG4Q92954 1404 aaPredicted RBP15.59■□□□□ 0.09
LDHC-207ENST00000541669 CARMIL2Q6F5E8 1435 aa15.58■□□□□ 0.09
LDHC-207ENST00000541669 ERCC6L2Q5T890 1561 aa15.56■□□□□ 0.08
LDHC-207ENST00000541669 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
LDHC-207ENST00000541669 FHOD3Q2V2M9 1422 aa15.54■□□□□ 0.08
LDHC-207ENST00000541669 P3H3Q8IVL6 736 aa15.51■□□□□ 0.07
LDHC-207ENST00000541669 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
LDHC-207ENST00000541669 RIMBP3CA6NJZ7 1639 aa15.49■□□□□ 0.07
LDHC-207ENST00000541669 RIMBP3BA6NNM3 1639 aa15.49■□□□□ 0.07
LDHC-207ENST00000541669 RIMBP3Q9UFD9 1639 aa15.49■□□□□ 0.07
LDHC-207ENST00000541669 FMN1Q68DA7 1419 aa15.49■□□□□ 0.07
LDHC-207ENST00000541669 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
LDHC-207ENST00000541669 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
LDHC-207ENST00000541669 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
LDHC-207ENST00000541669 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
LDHC-207ENST00000541669 PTPRGP23470 1445 aa15.44■□□□□ 0.06
LDHC-207ENST00000541669 ABCA8O94911 1581 aa15.42■□□□□ 0.06
LDHC-207ENST00000541669 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
LDHC-207ENST00000541669 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
LDHC-207ENST00000541669 FYCO1Q9BQS8 1478 aa15.41■□□□□ 0.06
LDHC-207ENST00000541669 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
LDHC-207ENST00000541669 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
LDHC-207ENST00000541669 PLB1Q6P1J6 1458 aa15.39■□□□□ 0.05
LDHC-207ENST00000541669 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
LDHC-207ENST00000541669 ABCC2Q92887 1545 aa15.37■□□□□ 0.05
LDHC-207ENST00000541669 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
LDHC-207ENST00000541669 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
LDHC-207ENST00000541669 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
LDHC-207ENST00000541669 NUP153P49790 1475 aaKnown RBP15.34■□□□□ 0.05
LDHC-207ENST00000541669 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.04
LDHC-207ENST00000541669 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
LDHC-207ENST00000541669 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
LDHC-207ENST00000541669 TIAM1Q13009 1591 aa15.31■□□□□ 0.04
LDHC-207ENST00000541669 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
LDHC-207ENST00000541669 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
LDHC-207ENST00000541669 ZCCHC11Q5TAX3 1644 aaKnown RBP15.3■□□□□ 0.04
LDHC-207ENST00000541669 CDK13Q14004 1512 aaKnown RBP15.28■□□□□ 0.04
LDHC-207ENST00000541669 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
LDHC-207ENST00000541669 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.03
LDHC-207ENST00000541669 APLP2Q06481 763 aa15.26■□□□□ 0.03
LDHC-207ENST00000541669 ATP10BO94823 1461 aa15.26■□□□□ 0.03
LDHC-207ENST00000541669 ARID3CA6NKF2 412 aa15.22■□□□□ 0.03
LDHC-207ENST00000541669 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.02
LDHC-207ENST00000541669 MAGI3Q5TCQ9 1506 aa15.2■□□□□ 0.02
LDHC-207ENST00000541669 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
LDHC-207ENST00000541669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
LDHC-207ENST00000541669 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
LDHC-207ENST00000541669 SUPT6HQ7KZ85 1726 aaKnown RBP15.18■□□□□ 0.02
LDHC-207ENST00000541669 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
LDHC-207ENST00000541669 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
LDHC-207ENST00000541669 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
LDHC-207ENST00000541669 MTUS2Q5JR59 1369 aa15.16■□□□□ 0.02
LDHC-207ENST00000541669 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
LDHC-207ENST00000541669 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
LDHC-207ENST00000541669 KIF14Q15058 1648 aa15.15■□□□□ 0.02
LDHC-207ENST00000541669 PLEKHD1A6NEE1 506 aa15.14■□□□□ 0.01
LDHC-207ENST00000541669 WDR7Q9Y4E6 1490 aa15.14■□□□□ 0.01
LDHC-207ENST00000541669 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
LDHC-207ENST00000541669 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
LDHC-207ENST00000541669 NCOA2Q15596 1464 aa15.09■□□□□ 0.01
LDHC-207ENST00000541669 CDC42BPAQ5VT25 1732 aa15.08■□□□□ 0.01
LDHC-207ENST00000541669 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0
LDHC-207ENST00000541669 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
LDHC-207ENST00000541669 ABCA9Q8IUA7 1624 aa15.07■□□□□ 0
LDHC-207ENST00000541669 TTC37Q6PGP7 1564 aa15.07■□□□□ 0
LDHC-207ENST00000541669 KIF13AQ9H1H9 1805 aa15.07■□□□□ 0
LDHC-207ENST00000541669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.06■□□□□ 0
LDHC-207ENST00000541669 ABCC10Q5T3U5 1492 aa15.05■□□□□ 0
LDHC-207ENST00000541669 DIP2BQ9P265 1576 aa15.05■□□□□ 0
LDHC-207ENST00000541669 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
LDHC-207ENST00000541669 GLI2P10070 1586 aa15.04■□□□□ -0
LDHC-207ENST00000541669 PREX2Q70Z35 1606 aa15.03■□□□□ -0
LDHC-207ENST00000541669 KCNH8Q96L42 1107 aa15.03■□□□□ -0
LDHC-207ENST00000541669 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
LDHC-207ENST00000541669 PHLDB1Q86UU1 1377 aa15.01□□□□□ -0.01
LDHC-207ENST00000541669 MYOM3Q5VTT5 1437 aa15□□□□□ -0.01
LDHC-207ENST00000541669 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
LDHC-207ENST00000541669 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
LDHC-207ENST00000541669 ARAP3Q8WWN8 1544 aa14.98□□□□□ -0.01
LDHC-207ENST00000541669 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
LDHC-207ENST00000541669 PTPN23Q9H3S7 1636 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms