RNA–Protein interactions for RNA: ENST00000541583.6

HKR1-203, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 1 (best) BASIC

Gene HKR1, Length 2,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-203ENST00000541583 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
HKR1-203ENST00000541583 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.48
HKR1-203ENST00000541583 IGF1RP08069 1367 aa12.02□□□□□ -0.49
HKR1-203ENST00000541583 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
HKR1-203ENST00000541583 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
HKR1-203ENST00000541583 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
HKR1-203ENST00000541583 ANP32EQ9BTT0 268 aa11.98□□□□□ -0.49
HKR1-203ENST00000541583 TDRD9Q8NDG6 1382 aaKnown RBP11.98□□□□□ -0.49
HKR1-203ENST00000541583 CUL7Q14999 1698 aa11.97□□□□□ -0.49
HKR1-203ENST00000541583 CARMIL1Q5VZK9 1371 aa11.95□□□□□ -0.5
HKR1-203ENST00000541583 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
HKR1-203ENST00000541583 PBRM1Q86U86 1689 aa11.93□□□□□ -0.5
HKR1-203ENST00000541583 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
HKR1-203ENST00000541583 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
HKR1-203ENST00000541583 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
HKR1-203ENST00000541583 CEP162Q5TB80 1403 aa11.91□□□□□ -0.5
HKR1-203ENST00000541583 EIF4G3O43432 1585 aaKnown RBP11.91□□□□□ -0.5
HKR1-203ENST00000541583 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
HKR1-203ENST00000541583 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
HKR1-203ENST00000541583 DIEXFQ68CQ4 756 aaKnown RBP11.87□□□□□ -0.51
HKR1-203ENST00000541583 CLIP1P30622 1438 aa11.84□□□□□ -0.51
HKR1-203ENST00000541583 YTHDC1Q96MU7 727 aaKnown RBP11.84□□□□□ -0.51
HKR1-203ENST00000541583 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
HKR1-203ENST00000541583 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
HKR1-203ENST00000541583 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
HKR1-203ENST00000541583 FOXD1Q16676 465 aa11.79□□□□□ -0.52
HKR1-203ENST00000541583 SYNJ2O15056 1496 aa11.78□□□□□ -0.52
HKR1-203ENST00000541583 GRIN2AQ12879 1464 aa11.77□□□□□ -0.53
HKR1-203ENST00000541583 ARHGAP35Q9NRY4 1499 aa11.75□□□□□ -0.53
HKR1-203ENST00000541583 EFCAB5A4FU69 1503 aa11.74□□□□□ -0.53
HKR1-203ENST00000541583 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
HKR1-203ENST00000541583 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
HKR1-203ENST00000541583 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
HKR1-203ENST00000541583 RANGAP1P46060 587 aaPredicted RBP11.72□□□□□ -0.53
HKR1-203ENST00000541583 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
HKR1-203ENST00000541583 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
HKR1-203ENST00000541583 KIAA0586Q9BVV6 1533 aa11.71□□□□□ -0.54
HKR1-203ENST00000541583 NUP160Q12769 1436 aa11.7□□□□□ -0.54
HKR1-203ENST00000541583 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
HKR1-203ENST00000541583 CEP170Q5SW79 1584 aa11.68□□□□□ -0.54
HKR1-203ENST00000541583 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
HKR1-203ENST00000541583 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
HKR1-203ENST00000541583 FBLN2P98095 1184 aa11.66□□□□□ -0.54
HKR1-203ENST00000541583 CHD1O14646 1710 aa11.65□□□□□ -0.54
HKR1-203ENST00000541583 FHOD3Q2V2M9 1422 aa11.63□□□□□ -0.55
HKR1-203ENST00000541583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
HKR1-203ENST00000541583 FMN1Q68DA7 1419 aa11.62□□□□□ -0.55
HKR1-203ENST00000541583 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
HKR1-203ENST00000541583 ANO8Q9HCE9 1232 aaPredicted RBP11.61□□□□□ -0.55
HKR1-203ENST00000541583 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
HKR1-203ENST00000541583 KIAA0556O60303 1618 aa11.6□□□□□ -0.55
HKR1-203ENST00000541583 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
HKR1-203ENST00000541583 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
HKR1-203ENST00000541583 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
HKR1-203ENST00000541583 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.55
HKR1-203ENST00000541583 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.56
HKR1-203ENST00000541583 ZBTB22O15209 634 aa11.58□□□□□ -0.56
HKR1-203ENST00000541583 MAP3K1Q13233 1512 aa11.58□□□□□ -0.56
HKR1-203ENST00000541583 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
HKR1-203ENST00000541583 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
HKR1-203ENST00000541583 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
HKR1-203ENST00000541583 CARMIL2Q6F5E8 1435 aa11.56□□□□□ -0.56
HKR1-203ENST00000541583 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
HKR1-203ENST00000541583 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
HKR1-203ENST00000541583 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
HKR1-203ENST00000541583 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
HKR1-203ENST00000541583 CFAP43Q8NDM7 1665 aa11.53□□□□□ -0.56
HKR1-203ENST00000541583 MIER1Q8N108 512 aa11.51□□□□□ -0.57
HKR1-203ENST00000541583 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
HKR1-203ENST00000541583 HECW1Q76N89 1606 aa11.51□□□□□ -0.57
HKR1-203ENST00000541583 PRG4Q92954 1404 aaPredicted RBP11.51□□□□□ -0.57
HKR1-203ENST00000541583 CCDC18Q5T9S5 1454 aa11.49□□□□□ -0.57
HKR1-203ENST00000541583 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
HKR1-203ENST00000541583 KANK4Q5T7N3 995 aaPredicted RBP11.47□□□□□ -0.57
HKR1-203ENST00000541583 RAPGEF6Q8TEU7 1601 aa11.47□□□□□ -0.57
HKR1-203ENST00000541583 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
HKR1-203ENST00000541583 LRRIQ1Q96JM4 1722 aa11.46□□□□□ -0.57
HKR1-203ENST00000541583 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.58
HKR1-203ENST00000541583 EPRSP07814 1512 aaKnown RBP11.45□□□□□ -0.58
HKR1-203ENST00000541583 NUP153P49790 1475 aaKnown RBP11.44□□□□□ -0.58
HKR1-203ENST00000541583 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
HKR1-203ENST00000541583 ABCA8O94911 1581 aa11.43□□□□□ -0.58
HKR1-203ENST00000541583 PTPRGP23470 1445 aa11.43□□□□□ -0.58
HKR1-203ENST00000541583 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
HKR1-203ENST00000541583 PLB1Q6P1J6 1458 aa11.43□□□□□ -0.58
HKR1-203ENST00000541583 EHBP1L1Q8N3D4 1523 aa11.42□□□□□ -0.58
HKR1-203ENST00000541583 ERCC6L2Q5T890 1561 aa11.41□□□□□ -0.58
HKR1-203ENST00000541583 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.58
HKR1-203ENST00000541583 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.58
HKR1-203ENST00000541583 CCDC136Q96JN2 1154 aa11.4□□□□□ -0.58
HKR1-203ENST00000541583 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
HKR1-203ENST00000541583 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
HKR1-203ENST00000541583 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
HKR1-203ENST00000541583 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
HKR1-203ENST00000541583 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
HKR1-203ENST00000541583 MAGI3Q5TCQ9 1506 aa11.37□□□□□ -0.59
HKR1-203ENST00000541583 SUPT6HQ7KZ85 1726 aaKnown RBP11.37□□□□□ -0.59
HKR1-203ENST00000541583 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
HKR1-203ENST00000541583 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
HKR1-203ENST00000541583 ABCC2Q92887 1545 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms