RNA–Protein interactions for RNA: ENST00000540557.1

AL138752.2-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AL138752.2, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL138752.2-201ENST00000540557 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
AL138752.2-201ENST00000540557 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
AL138752.2-201ENST00000540557 IL27Q8NEV9 243 aa24.83■■□□□ 1.56
AL138752.2-201ENST00000540557 ERICH3Q5RHP9 1530 aa24.82■■□□□ 1.56
AL138752.2-201ENST00000540557 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
AL138752.2-201ENST00000540557 RTN4Q9NQC3 1192 aaKnown RBP24.8■■□□□ 1.56
AL138752.2-201ENST00000540557 CUX1P39880 1505 aa24.8■■□□□ 1.56
AL138752.2-201ENST00000540557 ITGAEP38570 1179 aa24.79■■□□□ 1.56
AL138752.2-201ENST00000540557 FANCIQ9NVI1 1328 aa24.78■■□□□ 1.56
AL138752.2-201ENST00000540557 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
AL138752.2-201ENST00000540557 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
AL138752.2-201ENST00000540557 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
AL138752.2-201ENST00000540557 CUX2O14529 1486 aa24.7■■□□□ 1.55
AL138752.2-201ENST00000540557 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
AL138752.2-201ENST00000540557 FKBP8Q14318 412 aa24.69■■□□□ 1.54
AL138752.2-201ENST00000540557 CFTRP13569 1480 aa24.67■■□□□ 1.54
AL138752.2-201ENST00000540557 MAPKBP1O60336 1514 aa24.62■■□□□ 1.53
AL138752.2-201ENST00000540557 RAB3GAP2Q9H2M9 1393 aa24.62■■□□□ 1.53
AL138752.2-201ENST00000540557 DDX10Q13206 875 aaKnown RBP24.62■■□□□ 1.53
AL138752.2-201ENST00000540557 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.53
AL138752.2-201ENST00000540557 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
AL138752.2-201ENST00000540557 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
AL138752.2-201ENST00000540557 IGF1RP08069 1367 aa24.51■■□□□ 1.51
AL138752.2-201ENST00000540557 NBR1Q14596 966 aa24.5■■□□□ 1.51
AL138752.2-201ENST00000540557 HIRIP3Q9BW71 556 aaPredicted RBP24.48■■□□□ 1.51
AL138752.2-201ENST00000540557 TRIM52Q96A61 297 aa24.46■■□□□ 1.51
AL138752.2-201ENST00000540557 PPP1R15AO75807 674 aaPredicted RBP24.44■■□□□ 1.5
AL138752.2-201ENST00000540557 NEFLP07196 543 aa24.44■■□□□ 1.5
AL138752.2-201ENST00000540557 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
AL138752.2-201ENST00000540557 CARMIL1Q5VZK9 1371 aa24.43■■□□□ 1.5
AL138752.2-201ENST00000540557 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
AL138752.2-201ENST00000540557 P3H3Q8IVL6 736 aa24.38■■□□□ 1.49
AL138752.2-201ENST00000540557 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
AL138752.2-201ENST00000540557 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
AL138752.2-201ENST00000540557 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
AL138752.2-201ENST00000540557 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
AL138752.2-201ENST00000540557 ZMYND15Q9H091 742 aa24.35■■□□□ 1.49
AL138752.2-201ENST00000540557 PHLDB1Q86UU1 1377 aa24.33■■□□□ 1.49
AL138752.2-201ENST00000540557 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
AL138752.2-201ENST00000540557 ANP32CO43423 234 aa24.31■■□□□ 1.48
AL138752.2-201ENST00000540557 CCER2I3L3R5 266 aa24.29■■□□□ 1.48
AL138752.2-201ENST00000540557 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
AL138752.2-201ENST00000540557 LRRC9Q6ZRR7 1453 aa24.27■■□□□ 1.48
AL138752.2-201ENST00000540557 MAP3K1Q13233 1512 aa24.23■■□□□ 1.47
AL138752.2-201ENST00000540557 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
AL138752.2-201ENST00000540557 NOP58Q9Y2X3 529 aaKnown RBP24.2■■□□□ 1.47
AL138752.2-201ENST00000540557 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
AL138752.2-201ENST00000540557 VSIG10Q8N0Z9 540 aa24.19■■□□□ 1.46
AL138752.2-201ENST00000540557 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
AL138752.2-201ENST00000540557 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
AL138752.2-201ENST00000540557 IRX6P78412 446 aaPredicted RBP24.16■■□□□ 1.46
AL138752.2-201ENST00000540557 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
AL138752.2-201ENST00000540557 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.46
AL138752.2-201ENST00000540557 GLIPR1L2Q4G1C9 344 aa24.14■■□□□ 1.45
AL138752.2-201ENST00000540557 RTL5Q5HYW3 569 aaPredicted RBP24.14■■□□□ 1.45
AL138752.2-201ENST00000540557 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
AL138752.2-201ENST00000540557 PCF11O94913 1555 aaKnown RBP24.11■■□□□ 1.45
AL138752.2-201ENST00000540557 A0A0U1RQG5 324 aaPredicted RBP24.11■■□□□ 1.45
AL138752.2-201ENST00000540557 CFAP43Q8NDM7 1665 aa24.1■■□□□ 1.45
AL138752.2-201ENST00000540557 HNRNPUQ00839 825 aaKnown RBP eCLIP24.07■■□□□ 1.447e-8■□□□□ 8.3
AL138752.2-201ENST00000540557 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
AL138752.2-201ENST00000540557 C11orf95C9JLR9 678 aaPredicted RBP24.04■■□□□ 1.44
AL138752.2-201ENST00000540557 PDE4CQ08493 712 aa24.04■■□□□ 1.44
AL138752.2-201ENST00000540557 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
AL138752.2-201ENST00000540557 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
AL138752.2-201ENST00000540557 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
AL138752.2-201ENST00000540557 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
AL138752.2-201ENST00000540557 NESP48681 1621 aa24.01■■□□□ 1.43
AL138752.2-201ENST00000540557 FGD1P98174 961 aa24■■□□□ 1.43
AL138752.2-201ENST00000540557 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
AL138752.2-201ENST00000540557 CASKIN1Q8WXD9 1431 aa23.99■■□□□ 1.43
AL138752.2-201ENST00000540557 RSPH6AQ9H0K4 717 aa23.98■■□□□ 1.43
AL138752.2-201ENST00000540557 BRPF3Q9ULD4 1205 aa23.97■■□□□ 1.43
AL138752.2-201ENST00000540557 CCDC18Q5T9S5 1454 aa23.95■■□□□ 1.42
AL138752.2-201ENST00000540557 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
AL138752.2-201ENST00000540557 AAMPQ13685 434 aa23.94■■□□□ 1.42
AL138752.2-201ENST00000540557 RBM10P98175 930 aaKnown RBP23.94■■□□□ 1.42
AL138752.2-201ENST00000540557 WASHC2AQ641Q2 1341 aa23.93■■□□□ 1.42
AL138752.2-201ENST00000540557 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
AL138752.2-201ENST00000540557 FMN1Q68DA7 1419 aa23.91■■□□□ 1.42
AL138752.2-201ENST00000540557 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.422e-6■■■■□ 24.7
AL138752.2-201ENST00000540557 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
AL138752.2-201ENST00000540557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.89■■□□□ 1.41
AL138752.2-201ENST00000540557 CUL7Q14999 1698 aa23.89■■□□□ 1.41
AL138752.2-201ENST00000540557 PTPRKQ15262 1439 aa23.89■■□□□ 1.41
AL138752.2-201ENST00000540557 PDIA4P13667 645 aaKnown RBP23.89■■□□□ 1.41
AL138752.2-201ENST00000540557 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
AL138752.2-201ENST00000540557 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
AL138752.2-201ENST00000540557 WASHC2CQ9Y4E1 1318 aa23.88■■□□□ 1.41
AL138752.2-201ENST00000540557 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
AL138752.2-201ENST00000540557 CTTNBP2Q8WZ74 1663 aa23.85■■□□□ 1.41
AL138752.2-201ENST00000540557 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
AL138752.2-201ENST00000540557 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
AL138752.2-201ENST00000540557 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
AL138752.2-201ENST00000540557 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
AL138752.2-201ENST00000540557 HSPA5P11021 654 aaKnown RBP23.82■■□□□ 1.4
AL138752.2-201ENST00000540557 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
AL138752.2-201ENST00000540557 BCL11BQ9C0K0 894 aaPredicted RBP23.81■■□□□ 1.4
AL138752.2-201ENST00000540557 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
AL138752.2-201ENST00000540557 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms