RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
GABARAPL1-208ENST00000540424 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
GABARAPL1-208ENST00000540424 MAP3K1Q13233 1512 aa22.22■■□□□ 1.15
GABARAPL1-208ENST00000540424 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
GABARAPL1-208ENST00000540424 RRBP1Q9P2E9 1410 aaKnown RBP22.21■■□□□ 1.15
GABARAPL1-208ENST00000540424 MIER1Q8N108 512 aa22.18■■□□□ 1.14
GABARAPL1-208ENST00000540424 CUL7Q14999 1698 aa22.18■■□□□ 1.14
GABARAPL1-208ENST00000540424 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
GABARAPL1-208ENST00000540424 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
GABARAPL1-208ENST00000540424 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
GABARAPL1-208ENST00000540424 TSHZ2Q9NRE2 1034 aa22.14■■□□□ 1.14
GABARAPL1-208ENST00000540424 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
GABARAPL1-208ENST00000540424 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
GABARAPL1-208ENST00000540424 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
GABARAPL1-208ENST00000540424 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
GABARAPL1-208ENST00000540424 EFCAB5A4FU69 1503 aa22.1■■□□□ 1.13
GABARAPL1-208ENST00000540424 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
GABARAPL1-208ENST00000540424 WDR97A6NE52 1622 aa22.07■■□□□ 1.12
GABARAPL1-208ENST00000540424 WDR62O43379 1518 aa22.05■■□□□ 1.12
GABARAPL1-208ENST00000540424 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
GABARAPL1-208ENST00000540424 CTTNBP2Q8WZ74 1663 aa22.02■■□□□ 1.12
GABARAPL1-208ENST00000540424 PRKCSHP14314 528 aaPredicted RBP22.02■■□□□ 1.12
GABARAPL1-208ENST00000540424 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
GABARAPL1-208ENST00000540424 DHX57Q6P158 1386 aaKnown RBP22■■□□□ 1.11
GABARAPL1-208ENST00000540424 CFAP43Q8NDM7 1665 aa22■■□□□ 1.11
GABARAPL1-208ENST00000540424 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
GABARAPL1-208ENST00000540424 FYCO1Q9BQS8 1478 aa21.99■■□□□ 1.11
GABARAPL1-208ENST00000540424 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
GABARAPL1-208ENST00000540424 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
GABARAPL1-208ENST00000540424 CASKIN1Q8WXD9 1431 aa21.95■■□□□ 1.1
GABARAPL1-208ENST00000540424 FHOD3Q2V2M9 1422 aa21.94■■□□□ 1.1
GABARAPL1-208ENST00000540424 FMN1Q68DA7 1419 aa21.94■■□□□ 1.1
GABARAPL1-208ENST00000540424 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
GABARAPL1-208ENST00000540424 P3H3Q8IVL6 736 aa21.92■■□□□ 1.1
GABARAPL1-208ENST00000540424 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
GABARAPL1-208ENST00000540424 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
GABARAPL1-208ENST00000540424 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
GABARAPL1-208ENST00000540424 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
GABARAPL1-208ENST00000540424 ITGAEP38570 1179 aa21.84■■□□□ 1.09
GABARAPL1-208ENST00000540424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
GABARAPL1-208ENST00000540424 RAB3GAP2Q9H2M9 1393 aa21.8■■□□□ 1.08
GABARAPL1-208ENST00000540424 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
GABARAPL1-208ENST00000540424 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
GABARAPL1-208ENST00000540424 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.08
GABARAPL1-208ENST00000540424 ERICH6Q7L0X2 663 aa21.76■■□□□ 1.07
GABARAPL1-208ENST00000540424 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
GABARAPL1-208ENST00000540424 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
GABARAPL1-208ENST00000540424 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
GABARAPL1-208ENST00000540424 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
GABARAPL1-208ENST00000540424 ADAMTS12P58397 1594 aa21.67■■□□□ 1.06
GABARAPL1-208ENST00000540424 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
GABARAPL1-208ENST00000540424 CCDC18Q5T9S5 1454 aa21.65■■□□□ 1.06
GABARAPL1-208ENST00000540424 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
GABARAPL1-208ENST00000540424 IQGAP2Q13576 1575 aa21.64■■□□□ 1.06
GABARAPL1-208ENST00000540424 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
GABARAPL1-208ENST00000540424 SUPT6HQ7KZ85 1726 aaKnown RBP21.61■■□□□ 1.05
GABARAPL1-208ENST00000540424 NCOA2Q15596 1464 aa21.59■■□□□ 1.05
GABARAPL1-208ENST00000540424 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
GABARAPL1-208ENST00000540424 TIMELESSQ9UNS1 1208 aa21.58■■□□□ 1.05
GABARAPL1-208ENST00000540424 MYOM3Q5VTT5 1437 aa21.58■■□□□ 1.05
GABARAPL1-208ENST00000540424 LRRIQ1Q96JM4 1722 aa21.58■■□□□ 1.04
GABARAPL1-208ENST00000540424 RBM19Q9Y4C8 960 aaKnown RBP21.57■■□□□ 1.04
GABARAPL1-208ENST00000540424 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
GABARAPL1-208ENST00000540424 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
GABARAPL1-208ENST00000540424 UGGT2Q9NYU1 1516 aa21.54■■□□□ 1.04
GABARAPL1-208ENST00000540424 HFM1A2PYH4 1435 aa21.51■■□□□ 1.03
GABARAPL1-208ENST00000540424 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
GABARAPL1-208ENST00000540424 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
GABARAPL1-208ENST00000540424 EPRSP07814 1512 aaKnown RBP21.48■■□□□ 1.03
GABARAPL1-208ENST00000540424 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
GABARAPL1-208ENST00000540424 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
GABARAPL1-208ENST00000540424 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
GABARAPL1-208ENST00000540424 TCOF1Q13428 1488 aaKnown RBP21.44■■□□□ 1.02
GABARAPL1-208ENST00000540424 MAGI3Q5TCQ9 1506 aa21.43■■□□□ 1.02
GABARAPL1-208ENST00000540424 PTPRKQ15262 1439 aa21.42■■□□□ 1.02
GABARAPL1-208ENST00000540424 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
GABARAPL1-208ENST00000540424 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
GABARAPL1-208ENST00000540424 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
GABARAPL1-208ENST00000540424 NAIPQ13075 1403 aa21.4■■□□□ 1.02
GABARAPL1-208ENST00000540424 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
GABARAPL1-208ENST00000540424 KIAA0556O60303 1618 aa21.39■■□□□ 1.02
GABARAPL1-208ENST00000540424 MSH5O43196 834 aa21.39■■□□□ 1.02
GABARAPL1-208ENST00000540424 BCANQ96GW7 911 aa21.38■■□□□ 1.01
GABARAPL1-208ENST00000540424 FKBP8Q14318 412 aa21.37■■□□□ 1.01
GABARAPL1-208ENST00000540424 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
GABARAPL1-208ENST00000540424 DISP1Q96F81 1524 aa21.36■■□□□ 1.01
GABARAPL1-208ENST00000540424 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
GABARAPL1-208ENST00000540424 FANCIQ9NVI1 1328 aa21.35■■□□□ 1.01
GABARAPL1-208ENST00000540424 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
GABARAPL1-208ENST00000540424 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
GABARAPL1-208ENST00000540424 SYNJ2O15056 1496 aa21.32■■□□□ 1
GABARAPL1-208ENST00000540424 TONSLQ96HA7 1378 aa21.32■■□□□ 1
GABARAPL1-208ENST00000540424 GCC2Q8IWJ2 1684 aa21.3■■□□□ 1
GABARAPL1-208ENST00000540424 RAPGEF6Q8TEU7 1601 aa21.29■■□□□ 1
GABARAPL1-208ENST00000540424 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
GABARAPL1-208ENST00000540424 NUP153P49790 1475 aaKnown RBP21.27■□□□□ 0.99
GABARAPL1-208ENST00000540424 NEFLP07196 543 aa21.26■□□□□ 0.99
GABARAPL1-208ENST00000540424 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
GABARAPL1-208ENST00000540424 CHD1O14646 1710 aa21.23■□□□□ 0.99
GABARAPL1-208ENST00000540424 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms