RNA–Protein interactions for RNA: ENST00000540168.1

KDM5A-206, Transcript of lysine demethylase 5A, humanhuman

TSL 5

Gene KDM5A, Length 523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-206ENST00000540168 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
KDM5A-206ENST00000540168 NUP160Q12769 1436 aa11.83□□□□□ -0.52
KDM5A-206ENST00000540168 CLASP1Q7Z460 1538 aa11.82□□□□□ -0.52
KDM5A-206ENST00000540168 CLIP1P30622 1438 aa11.79□□□□□ -0.52
KDM5A-206ENST00000540168 IQGAP2Q13576 1575 aa11.79□□□□□ -0.52
KDM5A-206ENST00000540168 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
KDM5A-206ENST00000540168 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
KDM5A-206ENST00000540168 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
KDM5A-206ENST00000540168 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
KDM5A-206ENST00000540168 FBLN2P98095 1184 aa11.74□□□□□ -0.53
KDM5A-206ENST00000540168 EFCAB5A4FU69 1503 aa11.73□□□□□ -0.53
KDM5A-206ENST00000540168 UGGT2Q9NYU1 1516 aa11.72□□□□□ -0.53
KDM5A-206ENST00000540168 SAMD9Q5K651 1589 aa11.71□□□□□ -0.53
KDM5A-206ENST00000540168 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
KDM5A-206ENST00000540168 ARHGAP35Q9NRY4 1499 aa11.69□□□□□ -0.54
KDM5A-206ENST00000540168 KIAA0556O60303 1618 aa11.68□□□□□ -0.54
KDM5A-206ENST00000540168 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
KDM5A-206ENST00000540168 ARAP1Q96P48 1450 aa11.67□□□□□ -0.54
KDM5A-206ENST00000540168 DISP1Q96F81 1524 aa11.65□□□□□ -0.54
KDM5A-206ENST00000540168 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
KDM5A-206ENST00000540168 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
KDM5A-206ENST00000540168 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
KDM5A-206ENST00000540168 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
KDM5A-206ENST00000540168 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
KDM5A-206ENST00000540168 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
KDM5A-206ENST00000540168 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
KDM5A-206ENST00000540168 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
KDM5A-206ENST00000540168 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
KDM5A-206ENST00000540168 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
KDM5A-206ENST00000540168 APLP2Q06481 763 aa11.58□□□□□ -0.56
KDM5A-206ENST00000540168 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
KDM5A-206ENST00000540168 PCF11O94913 1555 aaKnown RBP11.56□□□□□ -0.56
KDM5A-206ENST00000540168 FYCO1Q9BQS8 1478 aa11.56□□□□□ -0.56
KDM5A-206ENST00000540168 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
KDM5A-206ENST00000540168 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
KDM5A-206ENST00000540168 CASKIN1Q8WXD9 1431 aa11.53□□□□□ -0.56
KDM5A-206ENST00000540168 ABCA8O94911 1581 aa11.53□□□□□ -0.56
KDM5A-206ENST00000540168 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
KDM5A-206ENST00000540168 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.57
KDM5A-206ENST00000540168 TIAM1Q13009 1591 aa11.52□□□□□ -0.57
KDM5A-206ENST00000540168 LRRIQ1Q96JM4 1722 aa11.52□□□□□ -0.57
KDM5A-206ENST00000540168 HECW1Q76N89 1606 aa11.51□□□□□ -0.57
KDM5A-206ENST00000540168 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
KDM5A-206ENST00000540168 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
KDM5A-206ENST00000540168 ADCY10Q96PN6 1610 aa11.49□□□□□ -0.57
KDM5A-206ENST00000540168 PTPRGP23470 1445 aa11.48□□□□□ -0.57
KDM5A-206ENST00000540168 ABCC2Q92887 1545 aa11.48□□□□□ -0.57
KDM5A-206ENST00000540168 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
KDM5A-206ENST00000540168 CCDC18Q5T9S5 1454 aa11.47□□□□□ -0.57
KDM5A-206ENST00000540168 PLB1Q6P1J6 1458 aa11.47□□□□□ -0.57
KDM5A-206ENST00000540168 NUP153P49790 1475 aaKnown RBP11.44□□□□□ -0.58
KDM5A-206ENST00000540168 UACAQ9BZF9 1416 aa11.44□□□□□ -0.58
KDM5A-206ENST00000540168 ZCCHC11Q5TAX3 1644 aaKnown RBP11.44□□□□□ -0.58
KDM5A-206ENST00000540168 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
KDM5A-206ENST00000540168 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
KDM5A-206ENST00000540168 LRRC9Q6ZRR7 1453 aa11.43□□□□□ -0.58
KDM5A-206ENST00000540168 KDM5BQ9UGL1 1544 aa11.41□□□□□ -0.58
KDM5A-206ENST00000540168 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.58
KDM5A-206ENST00000540168 EHBP1L1Q8N3D4 1523 aa11.4□□□□□ -0.58
KDM5A-206ENST00000540168 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
KDM5A-206ENST00000540168 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.58
KDM5A-206ENST00000540168 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.59
KDM5A-206ENST00000540168 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
KDM5A-206ENST00000540168 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
KDM5A-206ENST00000540168 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
KDM5A-206ENST00000540168 ATP10BO94823 1461 aa11.37□□□□□ -0.59
KDM5A-206ENST00000540168 MAPKBP1O60336 1514 aa11.36□□□□□ -0.59
KDM5A-206ENST00000540168 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
KDM5A-206ENST00000540168 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
KDM5A-206ENST00000540168 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
KDM5A-206ENST00000540168 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
KDM5A-206ENST00000540168 CDK11AQ9UQ88 783 aaPredicted RBP11.33□□□□□ -0.6
KDM5A-206ENST00000540168 KIF13AQ9H1H9 1805 aa11.3□□□□□ -0.6
KDM5A-206ENST00000540168 KIF14Q15058 1648 aa11.3□□□□□ -0.6
KDM5A-206ENST00000540168 NCOA2Q15596 1464 aa11.3□□□□□ -0.6
KDM5A-206ENST00000540168 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
KDM5A-206ENST00000540168 CCNB3Q8WWL7 1395 aa11.29□□□□□ -0.6
KDM5A-206ENST00000540168 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
KDM5A-206ENST00000540168 TROQ12816 1431 aaPredicted RBP11.28□□□□□ -0.6
KDM5A-206ENST00000540168 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
KDM5A-206ENST00000540168 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
KDM5A-206ENST00000540168 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
KDM5A-206ENST00000540168 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.6
KDM5A-206ENST00000540168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.27□□□□□ -0.61
KDM5A-206ENST00000540168 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
KDM5A-206ENST00000540168 TTC37Q6PGP7 1564 aa11.26□□□□□ -0.61
KDM5A-206ENST00000540168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
KDM5A-206ENST00000540168 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
KDM5A-206ENST00000540168 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
KDM5A-206ENST00000540168 GLI2P10070 1586 aa11.25□□□□□ -0.61
KDM5A-206ENST00000540168 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
KDM5A-206ENST00000540168 MYO5CQ9NQX4 1742 aa11.25□□□□□ -0.61
KDM5A-206ENST00000540168 FGD6Q6ZV73 1430 aa11.25□□□□□ -0.61
KDM5A-206ENST00000540168 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
KDM5A-206ENST00000540168 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
KDM5A-206ENST00000540168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.24□□□□□ -0.61
KDM5A-206ENST00000540168 PREX2Q70Z35 1606 aa11.24□□□□□ -0.61
KDM5A-206ENST00000540168 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
KDM5A-206ENST00000540168 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
KDM5A-206ENST00000540168 MIA2Q96PC5 1412 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms