RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
UBE3B-210ENST00000539599 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
UBE3B-210ENST00000539599 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
UBE3B-210ENST00000539599 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
UBE3B-210ENST00000539599 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
UBE3B-210ENST00000539599 PCF11O94913 1555 aaKnown RBP20.54■□□□□ 0.88
UBE3B-210ENST00000539599 SIN3AQ96ST3 1273 aa20.53■□□□□ 0.88
UBE3B-210ENST00000539599 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
UBE3B-210ENST00000539599 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.88
UBE3B-210ENST00000539599 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
UBE3B-210ENST00000539599 MAPKBP1O60336 1514 aa20.47■□□□□ 0.87
UBE3B-210ENST00000539599 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
UBE3B-210ENST00000539599 KCNH8Q96L42 1107 aa20.44■□□□□ 0.86
UBE3B-210ENST00000539599 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
UBE3B-210ENST00000539599 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
UBE3B-210ENST00000539599 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
UBE3B-210ENST00000539599 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
UBE3B-210ENST00000539599 FHAD1B1AJZ9 1412 aa20.41■□□□□ 0.86
UBE3B-210ENST00000539599 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
UBE3B-210ENST00000539599 MAP3K1Q13233 1512 aa20.36■□□□□ 0.85
UBE3B-210ENST00000539599 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
UBE3B-210ENST00000539599 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
UBE3B-210ENST00000539599 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
UBE3B-210ENST00000539599 CASKIN1Q8WXD9 1431 aa20.3■□□□□ 0.84
UBE3B-210ENST00000539599 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
UBE3B-210ENST00000539599 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
UBE3B-210ENST00000539599 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
UBE3B-210ENST00000539599 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
UBE3B-210ENST00000539599 PTPRKQ15262 1439 aa20.25■□□□□ 0.83
UBE3B-210ENST00000539599 CUL7Q14999 1698 aa20.25■□□□□ 0.83
UBE3B-210ENST00000539599 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
UBE3B-210ENST00000539599 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
UBE3B-210ENST00000539599 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
UBE3B-210ENST00000539599 LRRIQ1Q96JM4 1722 aa20.23■□□□□ 0.83
UBE3B-210ENST00000539599 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
UBE3B-210ENST00000539599 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
UBE3B-210ENST00000539599 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
UBE3B-210ENST00000539599 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
UBE3B-210ENST00000539599 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
UBE3B-210ENST00000539599 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
UBE3B-210ENST00000539599 AQRO60306 1485 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■■■ 33.2
UBE3B-210ENST00000539599 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
UBE3B-210ENST00000539599 NCOA2Q15596 1464 aa20.14■□□□□ 0.81
UBE3B-210ENST00000539599 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
UBE3B-210ENST00000539599 SUPT16HQ9Y5B9 1047 aaKnown RBP20.13■□□□□ 0.81
UBE3B-210ENST00000539599 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
UBE3B-210ENST00000539599 PPP1R15AO75807 674 aaPredicted RBP20.12■□□□□ 0.81
UBE3B-210ENST00000539599 MAGI3Q5TCQ9 1506 aa20.12■□□□□ 0.81
UBE3B-210ENST00000539599 SAMD9Q5K651 1589 aa20.11■□□□□ 0.81
UBE3B-210ENST00000539599 GRIN2BQ13224 1484 aa20.1■□□□□ 0.81
UBE3B-210ENST00000539599 MYOM3Q5VTT5 1437 aa20.06■□□□□ 0.8
UBE3B-210ENST00000539599 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
UBE3B-210ENST00000539599 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
UBE3B-210ENST00000539599 NAIPQ13075 1403 aa20.05■□□□□ 0.8
UBE3B-210ENST00000539599 PTPN23Q9H3S7 1636 aa20.04■□□□□ 0.8
UBE3B-210ENST00000539599 BCANQ96GW7 911 aa20.04■□□□□ 0.8
UBE3B-210ENST00000539599 CDK13Q14004 1512 aaKnown RBP20.03■□□□□ 0.8
UBE3B-210ENST00000539599 FOXD1Q16676 465 aa20.03■□□□□ 0.8
UBE3B-210ENST00000539599 HFM1A2PYH4 1435 aa20.03■□□□□ 0.8
UBE3B-210ENST00000539599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBE3B-210ENST00000539599 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
UBE3B-210ENST00000539599 UACAQ9BZF9 1416 aa19.99■□□□□ 0.79
UBE3B-210ENST00000539599 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
UBE3B-210ENST00000539599 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
UBE3B-210ENST00000539599 KDM6BO15054 1643 aa19.97■□□□□ 0.79
UBE3B-210ENST00000539599 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
UBE3B-210ENST00000539599 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
UBE3B-210ENST00000539599 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
UBE3B-210ENST00000539599 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
UBE3B-210ENST00000539599 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
UBE3B-210ENST00000539599 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
UBE3B-210ENST00000539599 IQGAP2Q13576 1575 aa19.92■□□□□ 0.78
UBE3B-210ENST00000539599 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
UBE3B-210ENST00000539599 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
UBE3B-210ENST00000539599 ANP32CO43423 234 aa19.89■□□□□ 0.78
UBE3B-210ENST00000539599 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
UBE3B-210ENST00000539599 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
UBE3B-210ENST00000539599 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
UBE3B-210ENST00000539599 FKBP8Q14318 412 aa19.87■□□□□ 0.77
UBE3B-210ENST00000539599 HECW1Q76N89 1606 aa19.86■□□□□ 0.77
UBE3B-210ENST00000539599 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
UBE3B-210ENST00000539599 FBLN2P98095 1184 aa19.83■□□□□ 0.77
UBE3B-210ENST00000539599 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
UBE3B-210ENST00000539599 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.77
UBE3B-210ENST00000539599 WDR62O43379 1518 aa19.83■□□□□ 0.76
UBE3B-210ENST00000539599 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
UBE3B-210ENST00000539599 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
UBE3B-210ENST00000539599 WASHC2AQ641Q2 1341 aa19.79■□□□□ 0.76
UBE3B-210ENST00000539599 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
UBE3B-210ENST00000539599 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
UBE3B-210ENST00000539599 ZNF777Q9ULD5 760 aaPredicted RBP19.77■□□□□ 0.76
UBE3B-210ENST00000539599 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.75
UBE3B-210ENST00000539599 CNGB1Q14028 1251 aaPredicted RBP19.76■□□□□ 0.75
UBE3B-210ENST00000539599 CCDC184Q52MB2 194 aa19.74■□□□□ 0.75
UBE3B-210ENST00000539599 NUP153P49790 1475 aaKnown RBP19.74■□□□□ 0.75
UBE3B-210ENST00000539599 GCC2Q8IWJ2 1684 aa19.74■□□□□ 0.75
UBE3B-210ENST00000539599 CCER2I3L3R5 266 aa19.74■□□□□ 0.75
UBE3B-210ENST00000539599 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
UBE3B-210ENST00000539599 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
UBE3B-210ENST00000539599 KIAA0556O60303 1618 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms