RNA–Protein interactions for RNA: ENST00000538621.2

PACSIN1-206, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-206ENST00000538621 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
PACSIN1-206ENST00000538621 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
PACSIN1-206ENST00000538621 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
PACSIN1-206ENST00000538621 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
PACSIN1-206ENST00000538621 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
PACSIN1-206ENST00000538621 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
PACSIN1-206ENST00000538621 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
PACSIN1-206ENST00000538621 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
PACSIN1-206ENST00000538621 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
PACSIN1-206ENST00000538621 VPS8Q8N3P4 1428 aa15.11■□□□□ 0.01
PACSIN1-206ENST00000538621 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0.01
PACSIN1-206ENST00000538621 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
PACSIN1-206ENST00000538621 ERCC6Q03468 1493 aa15.05■□□□□ -0
PACSIN1-206ENST00000538621 NCAPD3P42695 1498 aa15.05■□□□□ -0
PACSIN1-206ENST00000538621 MRS2Q9HD23 443 aa15.04■□□□□ -0
PACSIN1-206ENST00000538621 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
PACSIN1-206ENST00000538621 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
PACSIN1-206ENST00000538621 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
PACSIN1-206ENST00000538621 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
PACSIN1-206ENST00000538621 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
PACSIN1-206ENST00000538621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
PACSIN1-206ENST00000538621 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
PACSIN1-206ENST00000538621 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
PACSIN1-206ENST00000538621 EIF4G2P78344 907 aaKnown RBP eCLIP14.96□□□□□ -0.01
PACSIN1-206ENST00000538621 SUPT16HQ9Y5B9 1047 aaKnown RBP14.95□□□□□ -0.02
PACSIN1-206ENST00000538621 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
PACSIN1-206ENST00000538621 RAD54L2Q9Y4B4 1467 aa14.94□□□□□ -0.02
PACSIN1-206ENST00000538621 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
PACSIN1-206ENST00000538621 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
PACSIN1-206ENST00000538621 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
PACSIN1-206ENST00000538621 NESP48681 1621 aa14.92□□□□□ -0.02
PACSIN1-206ENST00000538621 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
PACSIN1-206ENST00000538621 KCNH8Q96L42 1107 aa14.91□□□□□ -0.02
PACSIN1-206ENST00000538621 IGF1RP08069 1367 aa14.91□□□□□ -0.02
PACSIN1-206ENST00000538621 RAB3GAP2Q9H2M9 1393 aa14.88□□□□□ -0.03
PACSIN1-206ENST00000538621 CFTRP13569 1480 aa14.88□□□□□ -0.03
PACSIN1-206ENST00000538621 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
PACSIN1-206ENST00000538621 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
PACSIN1-206ENST00000538621 CCDC136Q96JN2 1154 aa14.87□□□□□ -0.03
PACSIN1-206ENST00000538621 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
PACSIN1-206ENST00000538621 FOXD1Q16676 465 aa14.86□□□□□ -0.03
PACSIN1-206ENST00000538621 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
PACSIN1-206ENST00000538621 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
PACSIN1-206ENST00000538621 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
PACSIN1-206ENST00000538621 PLEKHD1A6NEE1 506 aa14.85□□□□□ -0.03
PACSIN1-206ENST00000538621 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
PACSIN1-206ENST00000538621 CANXP27824 592 aaKnown RBP14.84□□□□□ -0.03
PACSIN1-206ENST00000538621 SENP3Q9H4L4 574 aaPredicted RBP14.83□□□□□ -0.04
PACSIN1-206ENST00000538621 NBR1Q14596 966 aa14.83□□□□□ -0.04
PACSIN1-206ENST00000538621 CUX1P39880 1505 aa14.82□□□□□ -0.04
PACSIN1-206ENST00000538621 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
PACSIN1-206ENST00000538621 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
PACSIN1-206ENST00000538621 HMGXB3Q12766 1538 aa14.8□□□□□ -0.04
PACSIN1-206ENST00000538621 DHX57Q6P158 1386 aaKnown RBP14.79□□□□□ -0.04
PACSIN1-206ENST00000538621 KIF21BO75037 1637 aa14.78□□□□□ -0.04
PACSIN1-206ENST00000538621 ARHGAP35Q9NRY4 1499 aa14.77□□□□□ -0.05
PACSIN1-206ENST00000538621 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
PACSIN1-206ENST00000538621 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
PACSIN1-206ENST00000538621 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
PACSIN1-206ENST00000538621 HSPA5P11021 654 aaKnown RBP14.73□□□□□ -0.05
PACSIN1-206ENST00000538621 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
PACSIN1-206ENST00000538621 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
PACSIN1-206ENST00000538621 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
PACSIN1-206ENST00000538621 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
PACSIN1-206ENST00000538621 B4GALNT3Q6L9W6 998 aa14.72□□□□□ -0.05
PACSIN1-206ENST00000538621 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
PACSIN1-206ENST00000538621 PRXQ9BXM0 1461 aa14.71□□□□□ -0.05
PACSIN1-206ENST00000538621 PPP1R15AO75807 674 aaPredicted RBP14.71□□□□□ -0.06
PACSIN1-206ENST00000538621 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
PACSIN1-206ENST00000538621 WDR43Q15061 677 aaKnown RBP eCLIP14.66□□□□□ -0.06
PACSIN1-206ENST00000538621 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
PACSIN1-206ENST00000538621 JPH4Q96JJ6 628 aa14.66□□□□□ -0.06
PACSIN1-206ENST00000538621 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
PACSIN1-206ENST00000538621 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
PACSIN1-206ENST00000538621 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
PACSIN1-206ENST00000538621 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
PACSIN1-206ENST00000538621 MPHOSPH9Q99550 1183 aa14.62□□□□□ -0.07
PACSIN1-206ENST00000538621 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
PACSIN1-206ENST00000538621 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
PACSIN1-206ENST00000538621 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
PACSIN1-206ENST00000538621 L3MBTL2Q969R5 705 aa14.61□□□□□ -0.07
PACSIN1-206ENST00000538621 RBM19Q9Y4C8 960 aaKnown RBP14.61□□□□□ -0.07
PACSIN1-206ENST00000538621 CC2D1BQ5T0F9 858 aaKnown RBP14.6□□□□□ -0.07
PACSIN1-206ENST00000538621 PKD2Q13563 968 aa14.6□□□□□ -0.07
PACSIN1-206ENST00000538621 CARMIL2Q6F5E8 1435 aa14.59□□□□□ -0.07
PACSIN1-206ENST00000538621 PPP4R2Q9NY27 417 aa14.59□□□□□ -0.07
PACSIN1-206ENST00000538621 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
PACSIN1-206ENST00000538621 NEFMP07197 916 aa14.56□□□□□ -0.08
PACSIN1-206ENST00000538621 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
PACSIN1-206ENST00000538621 ARXQ96QS3 562 aa14.55□□□□□ -0.08
PACSIN1-206ENST00000538621 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
PACSIN1-206ENST00000538621 NEUROD2Q15784 382 aa14.54□□□□□ -0.08
PACSIN1-206ENST00000538621 ZNF644Q9H582 1327 aaPredicted RBP14.54□□□□□ -0.08
PACSIN1-206ENST00000538621 LRRC9Q6ZRR7 1453 aa14.54□□□□□ -0.08
PACSIN1-206ENST00000538621 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
PACSIN1-206ENST00000538621 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
PACSIN1-206ENST00000538621 TNNT2P45379 298 aaPredicted RBP14.52□□□□□ -0.09
PACSIN1-206ENST00000538621 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
PACSIN1-206ENST00000538621 KNSTRNQ9Y448 316 aa14.51□□□□□ -0.09
PACSIN1-206ENST00000538621 UBE2Q2Q8WVN8 375 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms