RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
CPNE8-203ENST00000538596 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
CPNE8-203ENST00000538596 PHLDB1Q86UU1 1377 aa17.46■□□□□ 0.39
CPNE8-203ENST00000538596 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
CPNE8-203ENST00000538596 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
CPNE8-203ENST00000538596 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
CPNE8-203ENST00000538596 MAP3K1Q13233 1512 aa17.4■□□□□ 0.38
CPNE8-203ENST00000538596 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
CPNE8-203ENST00000538596 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
CPNE8-203ENST00000538596 MAPKBP1O60336 1514 aa17.39■□□□□ 0.37
CPNE8-203ENST00000538596 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
CPNE8-203ENST00000538596 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
CPNE8-203ENST00000538596 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
CPNE8-203ENST00000538596 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
CPNE8-203ENST00000538596 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
CPNE8-203ENST00000538596 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
CPNE8-203ENST00000538596 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
CPNE8-203ENST00000538596 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
CPNE8-203ENST00000538596 CFAP43Q8NDM7 1665 aa17.33■□□□□ 0.36
CPNE8-203ENST00000538596 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
CPNE8-203ENST00000538596 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
CPNE8-203ENST00000538596 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
CPNE8-203ENST00000538596 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.35
CPNE8-203ENST00000538596 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
CPNE8-203ENST00000538596 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
CPNE8-203ENST00000538596 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
CPNE8-203ENST00000538596 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
CPNE8-203ENST00000538596 CUL7Q14999 1698 aa17.24■□□□□ 0.35
CPNE8-203ENST00000538596 CTTNBP2Q8WZ74 1663 aa17.24■□□□□ 0.35
CPNE8-203ENST00000538596 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
CPNE8-203ENST00000538596 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPNE8-203ENST00000538596 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
CPNE8-203ENST00000538596 DDX10Q13206 875 aaKnown RBP17.18■□□□□ 0.34
CPNE8-203ENST00000538596 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
CPNE8-203ENST00000538596 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
CPNE8-203ENST00000538596 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
CPNE8-203ENST00000538596 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
CPNE8-203ENST00000538596 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
CPNE8-203ENST00000538596 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
CPNE8-203ENST00000538596 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
CPNE8-203ENST00000538596 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
CPNE8-203ENST00000538596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
CPNE8-203ENST00000538596 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
CPNE8-203ENST00000538596 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
CPNE8-203ENST00000538596 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
CPNE8-203ENST00000538596 NCOA2Q15596 1464 aa17.08■□□□□ 0.33
CPNE8-203ENST00000538596 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
CPNE8-203ENST00000538596 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
CPNE8-203ENST00000538596 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
CPNE8-203ENST00000538596 TIMELESSQ9UNS1 1208 aa17.06■□□□□ 0.32
CPNE8-203ENST00000538596 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
CPNE8-203ENST00000538596 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
CPNE8-203ENST00000538596 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
CPNE8-203ENST00000538596 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
CPNE8-203ENST00000538596 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
CPNE8-203ENST00000538596 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
CPNE8-203ENST00000538596 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
CPNE8-203ENST00000538596 NAIPQ13075 1403 aa17.02■□□□□ 0.32
CPNE8-203ENST00000538596 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
CPNE8-203ENST00000538596 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
CPNE8-203ENST00000538596 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
CPNE8-203ENST00000538596 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
CPNE8-203ENST00000538596 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
CPNE8-203ENST00000538596 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
CPNE8-203ENST00000538596 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.31
CPNE8-203ENST00000538596 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
CPNE8-203ENST00000538596 WDR62O43379 1518 aa16.94■□□□□ 0.3
CPNE8-203ENST00000538596 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
CPNE8-203ENST00000538596 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
CPNE8-203ENST00000538596 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
CPNE8-203ENST00000538596 ANP32CO43423 234 aa16.92■□□□□ 0.3
CPNE8-203ENST00000538596 TRIM52Q96A61 297 aa16.92■□□□□ 0.3
CPNE8-203ENST00000538596 BCANQ96GW7 911 aa16.92■□□□□ 0.3
CPNE8-203ENST00000538596 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
CPNE8-203ENST00000538596 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
CPNE8-203ENST00000538596 KDM6BO15054 1643 aa16.89■□□□□ 0.29
CPNE8-203ENST00000538596 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
CPNE8-203ENST00000538596 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
CPNE8-203ENST00000538596 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
CPNE8-203ENST00000538596 FOXD1Q16676 465 aa16.87■□□□□ 0.29
CPNE8-203ENST00000538596 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
CPNE8-203ENST00000538596 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
CPNE8-203ENST00000538596 FKBP8Q14318 412 aa16.86■□□□□ 0.29
CPNE8-203ENST00000538596 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
CPNE8-203ENST00000538596 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
CPNE8-203ENST00000538596 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
CPNE8-203ENST00000538596 GCC2Q8IWJ2 1684 aa16.82■□□□□ 0.28
CPNE8-203ENST00000538596 MPHOSPH9Q99550 1183 aa16.82■□□□□ 0.28
CPNE8-203ENST00000538596 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
CPNE8-203ENST00000538596 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
CPNE8-203ENST00000538596 ZNF644Q9H582 1327 aaPredicted RBP16.8■□□□□ 0.28
CPNE8-203ENST00000538596 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
CPNE8-203ENST00000538596 FBLN2P98095 1184 aa16.78■□□□□ 0.28
CPNE8-203ENST00000538596 MIA2Q96PC5 1412 aa16.78■□□□□ 0.28
CPNE8-203ENST00000538596 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
CPNE8-203ENST00000538596 AKNAQ7Z591 1439 aa16.75■□□□□ 0.27
CPNE8-203ENST00000538596 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
CPNE8-203ENST00000538596 DAPK1P53355 1430 aa16.73■□□□□ 0.27
CPNE8-203ENST00000538596 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
CPNE8-203ENST00000538596 KIAA0556O60303 1618 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms