RNA–Protein interactions for RNA: ENST00000538097.5

NLGN4X-208, Transcript of neuroligin 4 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NLGN4X, Length 3,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN4X-208ENST00000538097 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
NLGN4X-208ENST00000538097 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
NLGN4X-208ENST00000538097 TOPBP1Q92547 1522 aa14.33□□□□□ -0.12
NLGN4X-208ENST00000538097 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
NLGN4X-208ENST00000538097 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
NLGN4X-208ENST00000538097 PHLDB1Q86UU1 1377 aa14.32□□□□□ -0.12
NLGN4X-208ENST00000538097 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
NLGN4X-208ENST00000538097 RAB3GAP2Q9H2M9 1393 aa14.3□□□□□ -0.12
NLGN4X-208ENST00000538097 FHOD3Q2V2M9 1422 aa14.28□□□□□ -0.12
NLGN4X-208ENST00000538097 CFAP43Q8NDM7 1665 aa14.28□□□□□ -0.12
NLGN4X-208ENST00000538097 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
NLGN4X-208ENST00000538097 MAPKBP1O60336 1514 aa14.28□□□□□ -0.12
NLGN4X-208ENST00000538097 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
NLGN4X-208ENST00000538097 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
NLGN4X-208ENST00000538097 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
NLGN4X-208ENST00000538097 CUL7Q14999 1698 aa14.22□□□□□ -0.13
NLGN4X-208ENST00000538097 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
NLGN4X-208ENST00000538097 EFCAB5A4FU69 1503 aa14.21□□□□□ -0.13
NLGN4X-208ENST00000538097 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
NLGN4X-208ENST00000538097 CASKIN1Q8WXD9 1431 aa14.21□□□□□ -0.14
NLGN4X-208ENST00000538097 WDR97A6NE52 1622 aa14.21□□□□□ -0.14
NLGN4X-208ENST00000538097 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
NLGN4X-208ENST00000538097 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
NLGN4X-208ENST00000538097 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
NLGN4X-208ENST00000538097 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
NLGN4X-208ENST00000538097 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
NLGN4X-208ENST00000538097 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
NLGN4X-208ENST00000538097 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
NLGN4X-208ENST00000538097 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
NLGN4X-208ENST00000538097 FMN1Q68DA7 1419 aa14.12□□□□□ -0.15
NLGN4X-208ENST00000538097 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
NLGN4X-208ENST00000538097 SAMD9Q5K651 1589 aa14.12□□□□□ -0.15
NLGN4X-208ENST00000538097 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.12□□□□□ -0.15
NLGN4X-208ENST00000538097 LRRIQ1Q96JM4 1722 aa14.1□□□□□ -0.15
NLGN4X-208ENST00000538097 FGD6Q6ZV73 1430 aa14.1□□□□□ -0.15
NLGN4X-208ENST00000538097 PTPRKQ15262 1439 aa14.08□□□□□ -0.16
NLGN4X-208ENST00000538097 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.16
NLGN4X-208ENST00000538097 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
NLGN4X-208ENST00000538097 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
NLGN4X-208ENST00000538097 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
NLGN4X-208ENST00000538097 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
NLGN4X-208ENST00000538097 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
NLGN4X-208ENST00000538097 NCOA2Q15596 1464 aa14.03□□□□□ -0.16
NLGN4X-208ENST00000538097 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
NLGN4X-208ENST00000538097 CCDC18Q5T9S5 1454 aa14.01□□□□□ -0.17
NLGN4X-208ENST00000538097 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
NLGN4X-208ENST00000538097 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
NLGN4X-208ENST00000538097 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
NLGN4X-208ENST00000538097 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
NLGN4X-208ENST00000538097 HFM1A2PYH4 1435 aa14□□□□□ -0.17
NLGN4X-208ENST00000538097 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
NLGN4X-208ENST00000538097 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
NLGN4X-208ENST00000538097 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
NLGN4X-208ENST00000538097 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
NLGN4X-208ENST00000538097 NAIPQ13075 1403 aa13.98□□□□□ -0.17
NLGN4X-208ENST00000538097 ARHGEF11O15085 1522 aa13.98□□□□□ -0.17
NLGN4X-208ENST00000538097 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
NLGN4X-208ENST00000538097 UGGT2Q9NYU1 1516 aa13.97□□□□□ -0.17
NLGN4X-208ENST00000538097 UACAQ9BZF9 1416 aa13.96□□□□□ -0.17
NLGN4X-208ENST00000538097 PBRM1Q86U86 1689 aa13.96□□□□□ -0.17
NLGN4X-208ENST00000538097 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
NLGN4X-208ENST00000538097 ADAMTS12P58397 1594 aa13.93□□□□□ -0.18
NLGN4X-208ENST00000538097 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
NLGN4X-208ENST00000538097 TONSLQ96HA7 1378 aa13.91□□□□□ -0.18
NLGN4X-208ENST00000538097 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
NLGN4X-208ENST00000538097 HECW1Q76N89 1606 aa13.9□□□□□ -0.18
NLGN4X-208ENST00000538097 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
NLGN4X-208ENST00000538097 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
NLGN4X-208ENST00000538097 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
NLGN4X-208ENST00000538097 RRP7BPQ9NSQ0 103 aa13.89□□□□□ -0.19
NLGN4X-208ENST00000538097 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
NLGN4X-208ENST00000538097 CHIC2Q9UKJ5 165 aa13.88□□□□□ -0.19
NLGN4X-208ENST00000538097 DENND4BO75064 1496 aaPredicted RBP13.88□□□□□ -0.19
NLGN4X-208ENST00000538097 KDM6BO15054 1643 aa13.87□□□□□ -0.19
NLGN4X-208ENST00000538097 WDR62O43379 1518 aa13.87□□□□□ -0.19
NLGN4X-208ENST00000538097 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
NLGN4X-208ENST00000538097 ZNF608Q9ULD9 1512 aaPredicted RBP13.86□□□□□ -0.19
NLGN4X-208ENST00000538097 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
NLGN4X-208ENST00000538097 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
NLGN4X-208ENST00000538097 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
NLGN4X-208ENST00000538097 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
NLGN4X-208ENST00000538097 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
NLGN4X-208ENST00000538097 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
NLGN4X-208ENST00000538097 ANP32CO43423 234 aa13.8□□□□□ -0.2
NLGN4X-208ENST00000538097 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
NLGN4X-208ENST00000538097 KIAA0556O60303 1618 aa13.79□□□□□ -0.2
NLGN4X-208ENST00000538097 KIAA0586Q9BVV6 1533 aa13.78□□□□□ -0.2
NLGN4X-208ENST00000538097 MPHOSPH9Q99550 1183 aa13.77□□□□□ -0.21
NLGN4X-208ENST00000538097 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.21
NLGN4X-208ENST00000538097 FOXD1Q16676 465 aa13.76□□□□□ -0.21
NLGN4X-208ENST00000538097 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
NLGN4X-208ENST00000538097 DAPK1P53355 1430 aa13.75□□□□□ -0.21
NLGN4X-208ENST00000538097 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
NLGN4X-208ENST00000538097 ABCC5O15440 1437 aa13.74□□□□□ -0.21
NLGN4X-208ENST00000538097 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
NLGN4X-208ENST00000538097 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
NLGN4X-208ENST00000538097 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
NLGN4X-208ENST00000538097 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
NLGN4X-208ENST00000538097 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
NLGN4X-208ENST00000538097 BCANQ96GW7 911 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms