RNA–Protein interactions for RNA: ENST00000536566.5

RAB6A-204, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB6A, Length 1,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-204ENST00000536566 RIMBP3Q9UFD9 1639 aa36.63■■■■□ 3.45
RAB6A-204ENST00000536566 KIAA0586Q9BVV6 1533 aa36.63■■■■□ 3.45
RAB6A-204ENST00000536566 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
RAB6A-204ENST00000536566 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
RAB6A-204ENST00000536566 FAM9AQ8IZU1 332 aaPredicted RBP36.42■■■■□ 3.42
RAB6A-204ENST00000536566 ARAP1Q96P48 1450 aa36.41■■■■□ 3.42
RAB6A-204ENST00000536566 IQGAP2Q13576 1575 aa36.4■■■■□ 3.42
RAB6A-204ENST00000536566 PRG4Q92954 1404 aaPredicted RBP36.4■■■■□ 3.42
RAB6A-204ENST00000536566 KIF21BO75037 1637 aa36.36■■■■□ 3.41
RAB6A-204ENST00000536566 ERCC6L2Q5T890 1561 aa36.34■■■■□ 3.41
RAB6A-204ENST00000536566 CYB5RLQ6IPT4 315 aa36.3■■■■□ 3.4
RAB6A-204ENST00000536566 CTTNBP2Q8WZ74 1663 aa36.29■■■■□ 3.4
RAB6A-204ENST00000536566 UGGT2Q9NYU1 1516 aa36.27■■■■□ 3.4
RAB6A-204ENST00000536566 CARMIL2Q6F5E8 1435 aa36.22■■■■□ 3.39
RAB6A-204ENST00000536566 GOLGA3Q08378 1498 aa36.15■■■■□ 3.38
RAB6A-204ENST00000536566 DISP1Q96F81 1524 aa36.14■■■■□ 3.38
RAB6A-204ENST00000536566 TNIKQ9UKE5 1360 aa36.08■■■■□ 3.37
RAB6A-204ENST00000536566 KIAA0556O60303 1618 aa36.05■■■■□ 3.36
RAB6A-204ENST00000536566 PTPRGP23470 1445 aa36.01■■■■□ 3.36
RAB6A-204ENST00000536566 UBTFP17480 764 aaKnown RBP35.96■■■■□ 3.35
RAB6A-204ENST00000536566 SAMD9Q5K651 1589 aa35.91■■■■□ 3.34
RAB6A-204ENST00000536566 EFCAB5A4FU69 1503 aa35.83■■■■□ 3.33
RAB6A-204ENST00000536566 EHMT2Q96KQ7 1210 aa35.82■■■■□ 3.32
RAB6A-204ENST00000536566 UHRF1BP1LA0JNW5 1464 aa35.8■■■■□ 3.32
RAB6A-204ENST00000536566 UACAQ9BZF9 1416 aa35.8■■■■□ 3.32
RAB6A-204ENST00000536566 ADCY10Q96PN6 1610 aa35.79■■■■□ 3.32
RAB6A-204ENST00000536566 TTBK1Q5TCY1 1321 aaPredicted RBP35.75■■■■□ 3.31
RAB6A-204ENST00000536566 ABCC2Q92887 1545 aa35.73■■■■□ 3.31
RAB6A-204ENST00000536566 NPM1P06748 294 aaKnown RBP eCLIP35.7■■■■□ 3.31
RAB6A-204ENST00000536566 AEBP2Q6ZN18 517 aaPredicted RBP35.7■■■■□ 3.31
RAB6A-204ENST00000536566 P3H3Q8IVL6 736 aa35.69■■■■□ 3.3
RAB6A-204ENST00000536566 RANGAP1P46060 587 aaPredicted RBP35.68■■■■□ 3.3
RAB6A-204ENST00000536566 ABCA8O94911 1581 aa35.66■■■■□ 3.3
RAB6A-204ENST00000536566 PLB1Q6P1J6 1458 aa35.65■■■■□ 3.3
RAB6A-204ENST00000536566 FHOD3Q2V2M9 1422 aa35.64■■■■□ 3.3
RAB6A-204ENST00000536566 ARHGAP35Q9NRY4 1499 aa35.63■■■■□ 3.29
RAB6A-204ENST00000536566 MAPKBP1O60336 1514 aa35.62■■■■□ 3.29
RAB6A-204ENST00000536566 KDM5BQ9UGL1 1544 aa35.61■■■■□ 3.29
RAB6A-204ENST00000536566 FMN1Q68DA7 1419 aa35.49■■■■□ 3.27
RAB6A-204ENST00000536566 CLIP1P30622 1438 aa35.49■■■■□ 3.27
RAB6A-204ENST00000536566 RAPGEF6Q8TEU7 1601 aa35.48■■■■□ 3.27
RAB6A-204ENST00000536566 TRHP20396 242 aaPredicted RBP35.45■■■■□ 3.27
RAB6A-204ENST00000536566 ZCCHC11Q5TAX3 1644 aaKnown RBP35.44■■■■□ 3.26
RAB6A-204ENST00000536566 LOC105371045A0A1W2PR82 267 aa35.43■■■■□ 3.26
RAB6A-204ENST00000536566 ABCC10Q5T3U5 1492 aa35.41■■■■□ 3.26
RAB6A-204ENST00000536566 ASXL2Q76L83 1435 aa35.4■■■■□ 3.26
RAB6A-204ENST00000536566 NUP153P49790 1475 aaKnown RBP35.38■■■■□ 3.25
RAB6A-204ENST00000536566 CEP162Q5TB80 1403 aa35.38■■■■□ 3.25
RAB6A-204ENST00000536566 ATP10BO94823 1461 aa35.35■■■■□ 3.25
RAB6A-204ENST00000536566 DIP2BQ9P265 1576 aa35.31■■■■□ 3.24
RAB6A-204ENST00000536566 WDR7Q9Y4E6 1490 aa35.29■■■■□ 3.24
RAB6A-204ENST00000536566 KIF13AQ9H1H9 1805 aa35.25■■■■□ 3.23
RAB6A-204ENST00000536566 HECW1Q76N89 1606 aa35.25■■■■□ 3.23
RAB6A-204ENST00000536566 FAM69CQ0P6D2 419 aa35.25■■■■□ 3.23
RAB6A-204ENST00000536566 CASKIN1Q8WXD9 1431 aa35.23■■■■□ 3.23
RAB6A-204ENST00000536566 GLI2P10070 1586 aa35.23■■■■□ 3.23
RAB6A-204ENST00000536566 EPRSP07814 1512 aaKnown RBP35.22■■■■□ 3.23
RAB6A-204ENST00000536566 ARID3CA6NKF2 412 aa35.18■■■■□ 3.22
RAB6A-204ENST00000536566 FYCO1Q9BQS8 1478 aa35.16■■■■□ 3.22
RAB6A-204ENST00000536566 PCF11O94913 1555 aaKnown RBP35.14■■■■□ 3.22
RAB6A-204ENST00000536566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.14■■■■□ 3.22
RAB6A-204ENST00000536566 HNRNPUL2Q1KMD3 747 aaKnown RBP35.14■■■■□ 3.22
RAB6A-204ENST00000536566 ATP1B4Q9UN42 357 aaPredicted RBP35.09■■■■□ 3.21
RAB6A-204ENST00000536566 CDK13Q14004 1512 aaKnown RBP35.08■■■■□ 3.21
RAB6A-204ENST00000536566 PLEKHD1A6NEE1 506 aa35.08■■■■□ 3.21
RAB6A-204ENST00000536566 CCDC18Q5T9S5 1454 aa35.08■■■■□ 3.21
RAB6A-204ENST00000536566 CDK11AQ9UQ88 783 aaPredicted RBP35.04■■■■□ 3.2
RAB6A-204ENST00000536566 KCNH8Q96L42 1107 aa35.03■■■■□ 3.2
RAB6A-204ENST00000536566 MAP3K4Q9Y6R4 1608 aa35.01■■■■□ 3.19
RAB6A-204ENST00000536566 LRRIQ1Q96JM4 1722 aa34.98■■■■□ 3.19
RAB6A-204ENST00000536566 VPS8Q8N3P4 1428 aa34.98■■■■□ 3.19
RAB6A-204ENST00000536566 CFAP43Q8NDM7 1665 aa34.96■■■■□ 3.19
RAB6A-204ENST00000536566 ABCA9Q8IUA7 1624 aa34.94■■■■□ 3.18
RAB6A-204ENST00000536566 CD109Q6YHK3 1445 aa34.92■■■■□ 3.18
RAB6A-204ENST00000536566 TROQ12816 1431 aaPredicted RBP34.9■■■■□ 3.18
RAB6A-204ENST00000536566 MAGI3Q5TCQ9 1506 aa34.9■■■■□ 3.18
RAB6A-204ENST00000536566 TEX14Q8IWB6 1497 aa34.89■■■■□ 3.18
RAB6A-204ENST00000536566 PPRC1Q5VV67 1664 aaKnown RBP34.87■■■■□ 3.17
RAB6A-204ENST00000536566 TSPOAP1O95153 1857 aa34.84■■■■□ 3.17
RAB6A-204ENST00000536566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.81■■■■□ 3.16
RAB6A-204ENST00000536566 KIF14Q15058 1648 aa34.77■■■■□ 3.16
RAB6A-204ENST00000536566 TTC37Q6PGP7 1564 aa34.74■■■■□ 3.15
RAB6A-204ENST00000536566 PHLDB1Q86UU1 1377 aa34.73■■■■□ 3.15
RAB6A-204ENST00000536566 MAP3K1Q13233 1512 aa34.72■■■■□ 3.15
RAB6A-204ENST00000536566 TIAM1Q13009 1591 aa34.68■■■■□ 3.14
RAB6A-204ENST00000536566 MTUS2Q5JR59 1369 aa34.68■■■■□ 3.14
RAB6A-204ENST00000536566 NEO1Q92859 1461 aa34.68■■■■□ 3.14
RAB6A-204ENST00000536566 ARAP3Q8WWN8 1544 aa34.66■■■■□ 3.14
RAB6A-204ENST00000536566 PLCH2O75038 1416 aa34.66■■■■□ 3.14
RAB6A-204ENST00000536566 KDM6BO15054 1643 aa34.66■■■■□ 3.14
RAB6A-204ENST00000536566 EHBP1L1Q8N3D4 1523 aa34.65■■■■□ 3.14
RAB6A-204ENST00000536566 CFAP74Q9C0B2 1584 aa34.58■■■■□ 3.13
RAB6A-204ENST00000536566 FANCAO15360 1455 aa34.58■■■■□ 3.13
RAB6A-204ENST00000536566 MYO5CQ9NQX4 1742 aa34.57■■■■□ 3.12
RAB6A-204ENST00000536566 COL17A1Q9UMD9 1497 aaPredicted RBP34.57■■■■□ 3.12
RAB6A-204ENST00000536566 LRRC9Q6ZRR7 1453 aa34.54■■■■□ 3.12
RAB6A-204ENST00000536566 APLP2Q06481 763 aa34.53■■■■□ 3.12
RAB6A-204ENST00000536566 EFCAB2Q5VUJ9 269 aa34.52■■■■□ 3.12
RAB6A-204ENST00000536566 AKNAQ7Z591 1439 aa34.51■■■■□ 3.12
RAB6A-204ENST00000536566 PREX2Q70Z35 1606 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms