RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
LGR5-202ENST00000536515 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
LGR5-202ENST00000536515 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
LGR5-202ENST00000536515 MIER1Q8N108 512 aa19.36■□□□□ 0.69
LGR5-202ENST00000536515 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
LGR5-202ENST00000536515 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
LGR5-202ENST00000536515 ARHGAP35Q9NRY4 1499 aa19.31■□□□□ 0.68
LGR5-202ENST00000536515 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
LGR5-202ENST00000536515 CLSPNQ9HAW4 1339 aa19.27■□□□□ 0.68
LGR5-202ENST00000536515 RRBP1Q9P2E9 1410 aaKnown RBP19.27■□□□□ 0.68
LGR5-202ENST00000536515 IGF1RP08069 1367 aa19.24■□□□□ 0.67
LGR5-202ENST00000536515 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
LGR5-202ENST00000536515 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
LGR5-202ENST00000536515 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
LGR5-202ENST00000536515 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
LGR5-202ENST00000536515 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
LGR5-202ENST00000536515 ITGAEP38570 1179 aa19.19■□□□□ 0.66
LGR5-202ENST00000536515 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
LGR5-202ENST00000536515 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
LGR5-202ENST00000536515 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
LGR5-202ENST00000536515 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
LGR5-202ENST00000536515 CUL7Q14999 1698 aa19.11■□□□□ 0.65
LGR5-202ENST00000536515 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
LGR5-202ENST00000536515 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
LGR5-202ENST00000536515 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
LGR5-202ENST00000536515 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
LGR5-202ENST00000536515 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
LGR5-202ENST00000536515 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
LGR5-202ENST00000536515 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
LGR5-202ENST00000536515 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
LGR5-202ENST00000536515 PHLDB1Q86UU1 1377 aa19■□□□□ 0.63
LGR5-202ENST00000536515 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
LGR5-202ENST00000536515 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
LGR5-202ENST00000536515 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
LGR5-202ENST00000536515 MAPKBP1O60336 1514 aa18.97■□□□□ 0.63
LGR5-202ENST00000536515 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
LGR5-202ENST00000536515 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
LGR5-202ENST00000536515 SETD5Q9C0A6 1442 aa18.96■□□□□ 0.63
LGR5-202ENST00000536515 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
LGR5-202ENST00000536515 CFAP43Q8NDM7 1665 aa18.93■□□□□ 0.62
LGR5-202ENST00000536515 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
LGR5-202ENST00000536515 CHD1O14646 1710 aa18.89■□□□□ 0.62
LGR5-202ENST00000536515 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
LGR5-202ENST00000536515 FYCO1Q9BQS8 1478 aa18.86■□□□□ 0.61
LGR5-202ENST00000536515 EFCAB5A4FU69 1503 aa18.85■□□□□ 0.61
LGR5-202ENST00000536515 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
LGR5-202ENST00000536515 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.6
LGR5-202ENST00000536515 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
LGR5-202ENST00000536515 NUP160Q12769 1436 aa18.81■□□□□ 0.6
LGR5-202ENST00000536515 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
LGR5-202ENST00000536515 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
LGR5-202ENST00000536515 FBLN2P98095 1184 aa18.76■□□□□ 0.59
LGR5-202ENST00000536515 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
LGR5-202ENST00000536515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.75■□□□□ 0.59
LGR5-202ENST00000536515 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
LGR5-202ENST00000536515 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
LGR5-202ENST00000536515 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
LGR5-202ENST00000536515 SUPT16HQ9Y5B9 1047 aaKnown RBP18.72■□□□□ 0.59
LGR5-202ENST00000536515 IQGAP2Q13576 1575 aa18.72■□□□□ 0.59
LGR5-202ENST00000536515 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
LGR5-202ENST00000536515 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.58
LGR5-202ENST00000536515 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
LGR5-202ENST00000536515 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
LGR5-202ENST00000536515 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
LGR5-202ENST00000536515 SAMD9Q5K651 1589 aa18.66■□□□□ 0.58
LGR5-202ENST00000536515 PTPRKQ15262 1439 aa18.65■□□□□ 0.58
LGR5-202ENST00000536515 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
LGR5-202ENST00000536515 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.58
LGR5-202ENST00000536515 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.57
LGR5-202ENST00000536515 LRRIQ1Q96JM4 1722 aa18.64■□□□□ 0.57
LGR5-202ENST00000536515 NCOA2Q15596 1464 aa18.62■□□□□ 0.57
LGR5-202ENST00000536515 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
LGR5-202ENST00000536515 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
LGR5-202ENST00000536515 MYOM3Q5VTT5 1437 aa18.6■□□□□ 0.57
LGR5-202ENST00000536515 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
LGR5-202ENST00000536515 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
LGR5-202ENST00000536515 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
LGR5-202ENST00000536515 NAIPQ13075 1403 aa18.56■□□□□ 0.56
LGR5-202ENST00000536515 SUPT6HQ7KZ85 1726 aaKnown RBP18.56■□□□□ 0.56
LGR5-202ENST00000536515 EHBP1L1Q8N3D4 1523 aa18.55■□□□□ 0.56
LGR5-202ENST00000536515 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
LGR5-202ENST00000536515 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
LGR5-202ENST00000536515 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
LGR5-202ENST00000536515 MAGI3Q5TCQ9 1506 aa18.51■□□□□ 0.55
LGR5-202ENST00000536515 ANP32CO43423 234 aa18.51■□□□□ 0.55
LGR5-202ENST00000536515 RRP7BPQ9NSQ0 103 aa18.49■□□□□ 0.55
LGR5-202ENST00000536515 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
LGR5-202ENST00000536515 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
LGR5-202ENST00000536515 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
LGR5-202ENST00000536515 CCER2I3L3R5 266 aa18.47■□□□□ 0.55
LGR5-202ENST00000536515 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
LGR5-202ENST00000536515 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
LGR5-202ENST00000536515 BCANQ96GW7 911 aa18.44■□□□□ 0.54
LGR5-202ENST00000536515 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
LGR5-202ENST00000536515 MYT1Q01538 1121 aa18.44■□□□□ 0.54
LGR5-202ENST00000536515 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
LGR5-202ENST00000536515 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
LGR5-202ENST00000536515 FKBP8Q14318 412 aa18.42■□□□□ 0.54
LGR5-202ENST00000536515 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
LGR5-202ENST00000536515 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms