RNA–Protein interactions for RNA: ENST00000536376.5

ATP2A1-203, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 2 BASIC

Gene ATP2A1, Length 3,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-203ENST00000536376 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
ATP2A1-203ENST00000536376 CUX2O14529 1486 aa16.92■□□□□ 0.3
ATP2A1-203ENST00000536376 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
ATP2A1-203ENST00000536376 CUX1P39880 1505 aa16.9■□□□□ 0.3
ATP2A1-203ENST00000536376 SETD5Q9C0A6 1442 aa16.89■□□□□ 0.3
ATP2A1-203ENST00000536376 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
ATP2A1-203ENST00000536376 ANP32CO43423 234 aa16.89■□□□□ 0.29
ATP2A1-203ENST00000536376 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
ATP2A1-203ENST00000536376 IRX6P78412 446 aaPredicted RBP16.88■□□□□ 0.29
ATP2A1-203ENST00000536376 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
ATP2A1-203ENST00000536376 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
ATP2A1-203ENST00000536376 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
ATP2A1-203ENST00000536376 LRRC9Q6ZRR7 1453 aa16.77■□□□□ 0.27
ATP2A1-203ENST00000536376 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATP2A1-203ENST00000536376 MSH5O43196 834 aa16.76■□□□□ 0.27
ATP2A1-203ENST00000536376 IGF1RP08069 1367 aa16.75■□□□□ 0.27
ATP2A1-203ENST00000536376 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
ATP2A1-203ENST00000536376 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
ATP2A1-203ENST00000536376 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
ATP2A1-203ENST00000536376 FHOD3Q2V2M9 1422 aa16.67■□□□□ 0.26
ATP2A1-203ENST00000536376 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
ATP2A1-203ENST00000536376 TIMELESSQ9UNS1 1208 aa16.65■□□□□ 0.26
ATP2A1-203ENST00000536376 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
ATP2A1-203ENST00000536376 CFTRP13569 1480 aa16.64■□□□□ 0.25
ATP2A1-203ENST00000536376 PCF11O94913 1555 aaKnown RBP16.63■□□□□ 0.25
ATP2A1-203ENST00000536376 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
ATP2A1-203ENST00000536376 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
ATP2A1-203ENST00000536376 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
ATP2A1-203ENST00000536376 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
ATP2A1-203ENST00000536376 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
ATP2A1-203ENST00000536376 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
ATP2A1-203ENST00000536376 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
ATP2A1-203ENST00000536376 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
ATP2A1-203ENST00000536376 CHIC2Q9UKJ5 165 aa16.56■□□□□ 0.24
ATP2A1-203ENST00000536376 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
ATP2A1-203ENST00000536376 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
ATP2A1-203ENST00000536376 HSPA5P11021 654 aaKnown RBP16.54■□□□□ 0.24
ATP2A1-203ENST00000536376 HMGXB3Q12766 1538 aa16.54■□□□□ 0.24
ATP2A1-203ENST00000536376 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
ATP2A1-203ENST00000536376 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
ATP2A1-203ENST00000536376 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
ATP2A1-203ENST00000536376 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.24
ATP2A1-203ENST00000536376 FGD6Q6ZV73 1430 aa16.52■□□□□ 0.23
ATP2A1-203ENST00000536376 CFAP43Q8NDM7 1665 aa16.51■□□□□ 0.23
ATP2A1-203ENST00000536376 FANCIQ9NVI1 1328 aa16.51■□□□□ 0.23
ATP2A1-203ENST00000536376 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATP2A1-203ENST00000536376 FOXD1Q16676 465 aa16.49■□□□□ 0.23
ATP2A1-203ENST00000536376 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
ATP2A1-203ENST00000536376 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
ATP2A1-203ENST00000536376 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
ATP2A1-203ENST00000536376 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
ATP2A1-203ENST00000536376 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
ATP2A1-203ENST00000536376 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
ATP2A1-203ENST00000536376 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
ATP2A1-203ENST00000536376 C11orf95C9JLR9 678 aaPredicted RBP16.45■□□□□ 0.22
ATP2A1-203ENST00000536376 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
ATP2A1-203ENST00000536376 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATP2A1-203ENST00000536376 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
ATP2A1-203ENST00000536376 NAIPQ13075 1403 aa16.43■□□□□ 0.22
ATP2A1-203ENST00000536376 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
ATP2A1-203ENST00000536376 NBR1Q14596 966 aa16.43■□□□□ 0.22
ATP2A1-203ENST00000536376 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
ATP2A1-203ENST00000536376 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
ATP2A1-203ENST00000536376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATP2A1-203ENST00000536376 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
ATP2A1-203ENST00000536376 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
ATP2A1-203ENST00000536376 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
ATP2A1-203ENST00000536376 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
ATP2A1-203ENST00000536376 NCOA2Q15596 1464 aa16.37■□□□□ 0.21
ATP2A1-203ENST00000536376 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
ATP2A1-203ENST00000536376 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
ATP2A1-203ENST00000536376 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
ATP2A1-203ENST00000536376 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
ATP2A1-203ENST00000536376 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
ATP2A1-203ENST00000536376 MPHOSPH9Q99550 1183 aa16.33■□□□□ 0.2
ATP2A1-203ENST00000536376 EFCAB5A4FU69 1503 aa16.32■□□□□ 0.2
ATP2A1-203ENST00000536376 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
ATP2A1-203ENST00000536376 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
ATP2A1-203ENST00000536376 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
ATP2A1-203ENST00000536376 ZNF326Q5BKZ1 582 aaKnown RBP16.3■□□□□ 0.2
ATP2A1-203ENST00000536376 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
ATP2A1-203ENST00000536376 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
ATP2A1-203ENST00000536376 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
ATP2A1-203ENST00000536376 NOP58Q9Y2X3 529 aaKnown RBP16.3■□□□□ 0.2
ATP2A1-203ENST00000536376 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
ATP2A1-203ENST00000536376 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
ATP2A1-203ENST00000536376 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
ATP2A1-203ENST00000536376 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
ATP2A1-203ENST00000536376 KIF7Q2M1P5 1343 aa16.27■□□□□ 0.19
ATP2A1-203ENST00000536376 KDM6BO15054 1643 aa16.27■□□□□ 0.19
ATP2A1-203ENST00000536376 CCDC136Q96JN2 1154 aa16.26■□□□□ 0.19
ATP2A1-203ENST00000536376 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
ATP2A1-203ENST00000536376 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
ATP2A1-203ENST00000536376 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
ATP2A1-203ENST00000536376 NESP48681 1621 aa16.23■□□□□ 0.19
ATP2A1-203ENST00000536376 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
ATP2A1-203ENST00000536376 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
ATP2A1-203ENST00000536376 MAGI3Q5TCQ9 1506 aa16.21■□□□□ 0.19
ATP2A1-203ENST00000536376 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.19
ATP2A1-203ENST00000536376 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms