RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
CPSF7-215ENST00000536145 TIAM1Q13009 1591 aa9.84□□□□□ -0.83
CPSF7-215ENST00000536145 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
CPSF7-215ENST00000536145 CUX1P39880 1505 aa9.82□□□□□ -0.84
CPSF7-215ENST00000536145 DDX10Q13206 875 aaKnown RBP9.8□□□□□ -0.84
CPSF7-215ENST00000536145 NEFLP07196 543 aa9.79□□□□□ -0.84
CPSF7-215ENST00000536145 KIF27Q86VH2 1401 aa9.78□□□□□ -0.84
CPSF7-215ENST00000536145 LRRC9Q6ZRR7 1453 aa9.78□□□□□ -0.84
CPSF7-215ENST00000536145 CFAP43Q8NDM7 1665 aa9.77□□□□□ -0.84
CPSF7-215ENST00000536145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.77□□□□□ -0.84
CPSF7-215ENST00000536145 SIN3AQ96ST3 1273 aa9.76□□□□□ -0.85
CPSF7-215ENST00000536145 PHLDB1Q86UU1 1377 aa9.75□□□□□ -0.85
CPSF7-215ENST00000536145 ERICH6BQ5W0A0 696 aa9.75□□□□□ -0.85
CPSF7-215ENST00000536145 KDM5BQ9UGL1 1544 aa9.75□□□□□ -0.85
CPSF7-215ENST00000536145 RANGAP1P46060 587 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-215ENST00000536145 ANP32CO43423 234 aa9.73□□□□□ -0.85
CPSF7-215ENST00000536145 ITGAEP38570 1179 aa9.73□□□□□ -0.85
CPSF7-215ENST00000536145 MYT1LQ9UL68 1186 aa9.73□□□□□ -0.85
CPSF7-215ENST00000536145 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
CPSF7-215ENST00000536145 HMGXB3Q12766 1538 aa9.7□□□□□ -0.86
CPSF7-215ENST00000536145 FHAD1B1AJZ9 1412 aa9.69□□□□□ -0.86
CPSF7-215ENST00000536145 IGF1RP08069 1367 aa9.69□□□□□ -0.86
CPSF7-215ENST00000536145 CDK11AQ9UQ88 783 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-215ENST00000536145 PCF11O94913 1555 aaKnown RBP9.67□□□□□ -0.86
CPSF7-215ENST00000536145 AQRO60306 1485 aaKnown RBP eCLIP9.67□□□□□ -0.863e-7■■■■■ 48.1
CPSF7-215ENST00000536145 CFTRP13569 1480 aa9.67□□□□□ -0.86
CPSF7-215ENST00000536145 NCAPD3P42695 1498 aa9.67□□□□□ -0.86
CPSF7-215ENST00000536145 NCOA2Q15596 1464 aa9.67□□□□□ -0.86
CPSF7-215ENST00000536145 PPP4R2Q9NY27 417 aa9.66□□□□□ -0.86
CPSF7-215ENST00000536145 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
CPSF7-215ENST00000536145 UACAQ9BZF9 1416 aa9.64□□□□□ -0.87
CPSF7-215ENST00000536145 FYCO1Q9BQS8 1478 aa9.63□□□□□ -0.87
CPSF7-215ENST00000536145 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
CPSF7-215ENST00000536145 PTPN23Q9H3S7 1636 aa9.63□□□□□ -0.87
CPSF7-215ENST00000536145 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
CPSF7-215ENST00000536145 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
CPSF7-215ENST00000536145 DEKP35659 375 aaKnown RBP9.62□□□□□ -0.87
CPSF7-215ENST00000536145 HIRIP3Q9BW71 556 aaPredicted RBP9.62□□□□□ -0.87
CPSF7-215ENST00000536145 CASKIN1Q8WXD9 1431 aa9.62□□□□□ -0.87
CPSF7-215ENST00000536145 CARMIL1Q5VZK9 1371 aa9.62□□□□□ -0.87
CPSF7-215ENST00000536145 CCDC18Q5T9S5 1454 aa9.61□□□□□ -0.87
CPSF7-215ENST00000536145 PTPRKQ15262 1439 aa9.61□□□□□ -0.87
CPSF7-215ENST00000536145 TONSLQ96HA7 1378 aa9.61□□□□□ -0.87
CPSF7-215ENST00000536145 FGD6Q6ZV73 1430 aa9.6□□□□□ -0.87
CPSF7-215ENST00000536145 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-215ENST00000536145 EFCAB5A4FU69 1503 aa9.6□□□□□ -0.87
CPSF7-215ENST00000536145 CNTLNQ9NXG0 1405 aa9.59□□□□□ -0.87
CPSF7-215ENST00000536145 HNRNPUQ00839 825 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPSF7-215ENST00000536145 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
CPSF7-215ENST00000536145 DENND4BO75064 1496 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-215ENST00000536145 NAIPQ13075 1403 aa9.58□□□□□ -0.88
CPSF7-215ENST00000536145 FAM50AQ14320 339 aaKnown RBP9.58□□□□□ -0.88
CPSF7-215ENST00000536145 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
CPSF7-215ENST00000536145 WASHC2AQ641Q2 1341 aa9.57□□□□□ -0.88
CPSF7-215ENST00000536145 IRX6P78412 446 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-215ENST00000536145 SNAPC4Q5SXM2 1469 aa9.56□□□□□ -0.88
CPSF7-215ENST00000536145 CCDC184Q52MB2 194 aa9.56□□□□□ -0.88
CPSF7-215ENST00000536145 ABCA5Q8WWZ7 1642 aa9.56□□□□□ -0.88
CPSF7-215ENST00000536145 NCOA1Q15788 1441 aa9.56□□□□□ -0.88
CPSF7-215ENST00000536145 ZBED9Q6R2W3 1325 aa9.56□□□□□ -0.88
CPSF7-215ENST00000536145 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
CPSF7-215ENST00000536145 NOP58Q9Y2X3 529 aaKnown RBP9.55□□□□□ -0.88
CPSF7-215ENST00000536145 HECW1Q76N89 1606 aa9.55□□□□□ -0.88
CPSF7-215ENST00000536145 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
CPSF7-215ENST00000536145 FHOD3Q2V2M9 1422 aa9.54□□□□□ -0.88
CPSF7-215ENST00000536145 GCC2Q8IWJ2 1684 aa9.53□□□□□ -0.88
CPSF7-215ENST00000536145 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-215ENST00000536145 AKNAQ7Z591 1439 aa9.53□□□□□ -0.88
CPSF7-215ENST00000536145 SMG6Q86US8 1419 aaKnown RBP9.53□□□□□ -0.88
CPSF7-215ENST00000536145 TCOF1Q13428 1488 aaKnown RBP9.53□□□□□ -0.88
CPSF7-215ENST00000536145 CCDC7Q96M83 1385 aa9.52□□□□□ -0.88
CPSF7-215ENST00000536145 FMN1Q68DA7 1419 aa9.52□□□□□ -0.89
CPSF7-215ENST00000536145 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
CPSF7-215ENST00000536145 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
CPSF7-215ENST00000536145 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-215ENST00000536145 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
CPSF7-215ENST00000536145 MYOM3Q5VTT5 1437 aa9.5□□□□□ -0.89
CPSF7-215ENST00000536145 GRIN2BQ13224 1484 aa9.5□□□□□ -0.89
CPSF7-215ENST00000536145 POLR1AO95602 1720 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-215ENST00000536145 SPATA31E1Q6ZUB1 1445 aa9.49□□□□□ -0.89
CPSF7-215ENST00000536145 CTTNBP2Q8WZ74 1663 aa9.49□□□□□ -0.89
CPSF7-215ENST00000536145 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
CPSF7-215ENST00000536145 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
CPSF7-215ENST00000536145 SAMD9Q5K651 1589 aa9.49□□□□□ -0.89
CPSF7-215ENST00000536145 EHBP1L1Q8N3D4 1523 aa9.47□□□□□ -0.89
CPSF7-215ENST00000536145 ABCA10Q8WWZ4 1543 aa9.47□□□□□ -0.89
CPSF7-215ENST00000536145 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
CPSF7-215ENST00000536145 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
CPSF7-215ENST00000536145 CUL7Q14999 1698 aa9.47□□□□□ -0.89
CPSF7-215ENST00000536145 KDM6BO15054 1643 aa9.46□□□□□ -0.89
CPSF7-215ENST00000536145 TEX14Q8IWB6 1497 aa9.46□□□□□ -0.9
CPSF7-215ENST00000536145 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
CPSF7-215ENST00000536145 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-215ENST00000536145 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
CPSF7-215ENST00000536145 CADPSQ9ULU8 1353 aa9.45□□□□□ -0.9
CPSF7-215ENST00000536145 NUDCQ9Y266 331 aa9.44□□□□□ -0.9
CPSF7-215ENST00000536145 MAGI3Q5TCQ9 1506 aa9.43□□□□□ -0.9
CPSF7-215ENST00000536145 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
CPSF7-215ENST00000536145 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
CPSF7-215ENST00000536145 DNMBPQ6XZF7 1577 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms