RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 TIAM1Q13009 1591 aa12.85□□□□□ -0.35
KPNB1-202ENST00000535458 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
KPNB1-202ENST00000535458 MAP3K1Q13233 1512 aa12.84□□□□□ -0.35
KPNB1-202ENST00000535458 PDS5BQ9NTI5 1447 aa12.83□□□□□ -0.35
KPNB1-202ENST00000535458 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
KPNB1-202ENST00000535458 THOC2Q8NI27 1593 aaKnown RBP12.83□□□□□ -0.36
KPNB1-202ENST00000535458 LRRC9Q6ZRR7 1453 aa12.82□□□□□ -0.36
KPNB1-202ENST00000535458 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
KPNB1-202ENST00000535458 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
KPNB1-202ENST00000535458 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
KPNB1-202ENST00000535458 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
KPNB1-202ENST00000535458 BCANQ96GW7 911 aa12.79□□□□□ -0.36
KPNB1-202ENST00000535458 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.36
KPNB1-202ENST00000535458 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.36
KPNB1-202ENST00000535458 MAPKBP1O60336 1514 aa12.77□□□□□ -0.36
KPNB1-202ENST00000535458 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
KPNB1-202ENST00000535458 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
KPNB1-202ENST00000535458 PCF11O94913 1555 aaKnown RBP12.75□□□□□ -0.37
KPNB1-202ENST00000535458 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
KPNB1-202ENST00000535458 MRC2Q9UBG0 1479 aa12.74□□□□□ -0.37
KPNB1-202ENST00000535458 WDR62O43379 1518 aa12.74□□□□□ -0.37
KPNB1-202ENST00000535458 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
KPNB1-202ENST00000535458 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
KPNB1-202ENST00000535458 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
KPNB1-202ENST00000535458 ABCA10Q8WWZ4 1543 aa12.73□□□□□ -0.37
KPNB1-202ENST00000535458 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
KPNB1-202ENST00000535458 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
KPNB1-202ENST00000535458 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
KPNB1-202ENST00000535458 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
KPNB1-202ENST00000535458 FYCO1Q9BQS8 1478 aa12.69□□□□□ -0.38
KPNB1-202ENST00000535458 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
KPNB1-202ENST00000535458 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
KPNB1-202ENST00000535458 CUL7Q14999 1698 aa12.67□□□□□ -0.38
KPNB1-202ENST00000535458 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.388e-8■■■■■ 27.2
KPNB1-202ENST00000535458 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
KPNB1-202ENST00000535458 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
KPNB1-202ENST00000535458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■■■ 31.3
KPNB1-202ENST00000535458 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
KPNB1-202ENST00000535458 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
KPNB1-202ENST00000535458 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
KPNB1-202ENST00000535458 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
KPNB1-202ENST00000535458 FGD6Q6ZV73 1430 aa12.6□□□□□ -0.39
KPNB1-202ENST00000535458 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
KPNB1-202ENST00000535458 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
KPNB1-202ENST00000535458 MTUS2Q5JR59 1369 aa12.6□□□□□ -0.39
KPNB1-202ENST00000535458 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
KPNB1-202ENST00000535458 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
KPNB1-202ENST00000535458 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.39
KPNB1-202ENST00000535458 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
KPNB1-202ENST00000535458 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
KPNB1-202ENST00000535458 ABCA5Q8WWZ7 1642 aa12.56□□□□□ -0.4
KPNB1-202ENST00000535458 GAPVD1Q14C86 1478 aa12.56□□□□□ -0.4
KPNB1-202ENST00000535458 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
KPNB1-202ENST00000535458 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
KPNB1-202ENST00000535458 CCDC18Q5T9S5 1454 aa12.55□□□□□ -0.4
KPNB1-202ENST00000535458 FKBP8Q14318 412 aa12.55□□□□□ -0.4
KPNB1-202ENST00000535458 LRRIQ1Q96JM4 1722 aa12.54□□□□□ -0.4
KPNB1-202ENST00000535458 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
KPNB1-202ENST00000535458 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
KPNB1-202ENST00000535458 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
KPNB1-202ENST00000535458 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
KPNB1-202ENST00000535458 TONSLQ96HA7 1378 aa12.53□□□□□ -0.4
KPNB1-202ENST00000535458 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
KPNB1-202ENST00000535458 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
KPNB1-202ENST00000535458 UACAQ9BZF9 1416 aa12.52□□□□□ -0.41
KPNB1-202ENST00000535458 PTPN23Q9H3S7 1636 aa12.52□□□□□ -0.41
KPNB1-202ENST00000535458 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
KPNB1-202ENST00000535458 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
KPNB1-202ENST00000535458 NAIPQ13075 1403 aa12.5□□□□□ -0.41
KPNB1-202ENST00000535458 SUPT6HQ7KZ85 1726 aaKnown RBP12.49□□□□□ -0.41
KPNB1-202ENST00000535458 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
KPNB1-202ENST00000535458 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
KPNB1-202ENST00000535458 ANP32CO43423 234 aa12.48□□□□□ -0.41
KPNB1-202ENST00000535458 NEFLP07196 543 aa12.48□□□□□ -0.41
KPNB1-202ENST00000535458 TRIM52Q96A61 297 aa12.47□□□□□ -0.41
KPNB1-202ENST00000535458 CCER2I3L3R5 266 aa12.47□□□□□ -0.41
KPNB1-202ENST00000535458 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.41
KPNB1-202ENST00000535458 MAGI3Q5TCQ9 1506 aa12.45□□□□□ -0.42
KPNB1-202ENST00000535458 RRP7BPQ9NSQ0 103 aa12.44□□□□□ -0.42
KPNB1-202ENST00000535458 ARHGEF11O15085 1522 aa12.44□□□□□ -0.42
KPNB1-202ENST00000535458 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
KPNB1-202ENST00000535458 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
KPNB1-202ENST00000535458 TCOF1Q13428 1488 aaKnown RBP12.41□□□□□ -0.42
KPNB1-202ENST00000535458 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
KPNB1-202ENST00000535458 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
KPNB1-202ENST00000535458 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
KPNB1-202ENST00000535458 EPRSP07814 1512 aaKnown RBP12.39□□□□□ -0.43
KPNB1-202ENST00000535458 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
KPNB1-202ENST00000535458 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
KPNB1-202ENST00000535458 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
KPNB1-202ENST00000535458 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
KPNB1-202ENST00000535458 CDK13Q14004 1512 aaKnown RBP12.37□□□□□ -0.43
KPNB1-202ENST00000535458 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
KPNB1-202ENST00000535458 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
KPNB1-202ENST00000535458 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
KPNB1-202ENST00000535458 KDM6BO15054 1643 aa12.35□□□□□ -0.43
KPNB1-202ENST00000535458 AKNAQ7Z591 1439 aa12.35□□□□□ -0.43
KPNB1-202ENST00000535458 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
KPNB1-202ENST00000535458 HSPA5P11021 654 aaKnown RBP12.35□□□□□ -0.43
KPNB1-202ENST00000535458 MPHOSPH9Q99550 1183 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms