RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
NPIPB3-206ENST00000534903 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
NPIPB3-206ENST00000534903 SYNJ2O15056 1496 aa8.82□□□□□ -1
NPIPB3-206ENST00000534903 GOLGA3Q08378 1498 aa8.81□□□□□ -1
NPIPB3-206ENST00000534903 RUSC2Q8N2Y8 1516 aa8.8□□□□□ -1
NPIPB3-206ENST00000534903 GRIN2BQ13224 1484 aa8.8□□□□□ -1
NPIPB3-206ENST00000534903 RAD54L2Q9Y4B4 1467 aa8.8□□□□□ -1
NPIPB3-206ENST00000534903 FGD5Q6ZNL6 1462 aa8.79□□□□□ -1
NPIPB3-206ENST00000534903 CSRNP3Q8WYN3 585 aa8.79□□□□□ -1
NPIPB3-206ENST00000534903 KDM4FA0A1W2PPD8 638 aa8.78□□□□□ -1
NPIPB3-206ENST00000534903 ERICH3Q5RHP9 1530 aa8.78□□□□□ -1
NPIPB3-206ENST00000534903 KIF27Q86VH2 1401 aa8.78□□□□□ -1
NPIPB3-206ENST00000534903 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1.01
NPIPB3-206ENST00000534903 TNIKQ9UKE5 1360 aa8.76□□□□□ -1.01
NPIPB3-206ENST00000534903 ABCA10Q8WWZ4 1543 aa8.75□□□□□ -1.01
NPIPB3-206ENST00000534903 PRXQ9BXM0 1461 aa8.74□□□□□ -1.01
NPIPB3-206ENST00000534903 CEP162Q5TB80 1403 aa8.71□□□□□ -1.01
NPIPB3-206ENST00000534903 HOXD11P31277 338 aaPredicted RBP8.71□□□□□ -1.02
NPIPB3-206ENST00000534903 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
NPIPB3-206ENST00000534903 FAM69CQ0P6D2 419 aa8.7□□□□□ -1.02
NPIPB3-206ENST00000534903 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
NPIPB3-206ENST00000534903 CUL7Q14999 1698 aa8.69□□□□□ -1.02
NPIPB3-206ENST00000534903 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
NPIPB3-206ENST00000534903 C1QBPQ07021 282 aaKnown RBP8.68□□□□□ -1.02
NPIPB3-206ENST00000534903 NUP160Q12769 1436 aa8.68□□□□□ -1.02
NPIPB3-206ENST00000534903 ERCC6L2Q5T890 1561 aa8.68□□□□□ -1.02
NPIPB3-206ENST00000534903 GRIN2AQ12879 1464 aa8.67□□□□□ -1.02
NPIPB3-206ENST00000534903 CEP170Q5SW79 1584 aa8.67□□□□□ -1.02
NPIPB3-206ENST00000534903 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
NPIPB3-206ENST00000534903 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
NPIPB3-206ENST00000534903 KIF13AQ9H1H9 1805 aa8.66□□□□□ -1.02
NPIPB3-206ENST00000534903 IGF1RP08069 1367 aa8.65□□□□□ -1.02
NPIPB3-206ENST00000534903 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-206ENST00000534903 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
NPIPB3-206ENST00000534903 CLIP1P30622 1438 aa8.63□□□□□ -1.03
NPIPB3-206ENST00000534903 SHROOM2Q13796 1616 aa8.63□□□□□ -1.03
NPIPB3-206ENST00000534903 CARMIL1Q5VZK9 1371 aa8.62□□□□□ -1.03
NPIPB3-206ENST00000534903 FBXO41Q8TF61 875 aa8.62□□□□□ -1.03
NPIPB3-206ENST00000534903 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
NPIPB3-206ENST00000534903 PRG4Q92954 1404 aaPredicted RBP8.62□□□□□ -1.03
NPIPB3-206ENST00000534903 KDM6BO15054 1643 aa8.62□□□□□ -1.03
NPIPB3-206ENST00000534903 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
NPIPB3-206ENST00000534903 FHAD1B1AJZ9 1412 aa8.61□□□□□ -1.03
NPIPB3-206ENST00000534903 DIP2BQ9P265 1576 aa8.6□□□□□ -1.03
NPIPB3-206ENST00000534903 VPS8Q8N3P4 1428 aa8.59□□□□□ -1.03
NPIPB3-206ENST00000534903 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
NPIPB3-206ENST00000534903 ADAMTS12P58397 1594 aa8.57□□□□□ -1.04
NPIPB3-206ENST00000534903 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
NPIPB3-206ENST00000534903 EFCAB5A4FU69 1503 aa8.55□□□□□ -1.04
NPIPB3-206ENST00000534903 TRIM26Q12899 539 aaPredicted RBP8.55□□□□□ -1.04
NPIPB3-206ENST00000534903 HECW2Q9P2P5 1572 aa8.55□□□□□ -1.04
NPIPB3-206ENST00000534903 ARHGAP35Q9NRY4 1499 aa8.54□□□□□ -1.04
NPIPB3-206ENST00000534903 PPP4R3CPQ6ZMV5 832 aa8.51□□□□□ -1.05
NPIPB3-206ENST00000534903 ADCY10Q96PN6 1610 aa8.51□□□□□ -1.05
NPIPB3-206ENST00000534903 SAMD9Q5K651 1589 aa8.5□□□□□ -1.05
NPIPB3-206ENST00000534903 PCGF6Q9BYE7 350 aa8.5□□□□□ -1.05
NPIPB3-206ENST00000534903 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-206ENST00000534903 POTEHQ6S545 545 aa8.48□□□□□ -1.05
NPIPB3-206ENST00000534903 PLB1Q6P1J6 1458 aa8.48□□□□□ -1.05
NPIPB3-206ENST00000534903 MAP3K1Q13233 1512 aa8.47□□□□□ -1.05
NPIPB3-206ENST00000534903 GLI2P10070 1586 aa8.47□□□□□ -1.05
NPIPB3-206ENST00000534903 IQGAP2Q13576 1575 aa8.47□□□□□ -1.05
NPIPB3-206ENST00000534903 COL17A1Q9UMD9 1497 aaPredicted RBP8.46□□□□□ -1.05
NPIPB3-206ENST00000534903 CFAP43Q8NDM7 1665 aa8.46□□□□□ -1.06
NPIPB3-206ENST00000534903 LMTK3Q96Q04 1460 aa8.45□□□□□ -1.06
NPIPB3-206ENST00000534903 KIAA0586Q9BVV6 1533 aa8.45□□□□□ -1.06
NPIPB3-206ENST00000534903 PCF11O94913 1555 aaKnown RBP8.45□□□□□ -1.06
NPIPB3-206ENST00000534903 PTPRGP23470 1445 aa8.45□□□□□ -1.06
NPIPB3-206ENST00000534903 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
NPIPB3-206ENST00000534903 FYCO1Q9BQS8 1478 aa8.45□□□□□ -1.06
NPIPB3-206ENST00000534903 ABCC2Q92887 1545 aa8.44□□□□□ -1.06
NPIPB3-206ENST00000534903 APLP2Q06481 763 aa8.44□□□□□ -1.06
NPIPB3-206ENST00000534903 CNKSR2Q8WXI2 1034 aa8.44□□□□□ -1.06
NPIPB3-206ENST00000534903 TSPOAP1O95153 1857 aa8.44□□□□□ -1.06
NPIPB3-206ENST00000534903 TEX14Q8IWB6 1497 aa8.44□□□□□ -1.06
NPIPB3-206ENST00000534903 UGGT2Q9NYU1 1516 aa8.44□□□□□ -1.06
NPIPB3-206ENST00000534903 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-206ENST00000534903 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
NPIPB3-206ENST00000534903 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
NPIPB3-206ENST00000534903 SOCS7O14512 581 aa8.42□□□□□ -1.06
NPIPB3-206ENST00000534903 FHOD3Q2V2M9 1422 aa8.42□□□□□ -1.06
NPIPB3-206ENST00000534903 CASKIN1Q8WXD9 1431 aa8.41□□□□□ -1.06
NPIPB3-206ENST00000534903 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.06
NPIPB3-206ENST00000534903 UHRF1BP1LA0JNW5 1464 aa8.4□□□□□ -1.06
NPIPB3-206ENST00000534903 KIAA0556O60303 1618 aa8.4□□□□□ -1.07
NPIPB3-206ENST00000534903 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
NPIPB3-206ENST00000534903 CARMIL2Q6F5E8 1435 aa8.38□□□□□ -1.07
NPIPB3-206ENST00000534903 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
NPIPB3-206ENST00000534903 HECW1Q76N89 1606 aa8.38□□□□□ -1.07
NPIPB3-206ENST00000534903 LRRC9Q6ZRR7 1453 aa8.37□□□□□ -1.07
NPIPB3-206ENST00000534903 UACAQ9BZF9 1416 aa8.37□□□□□ -1.07
NPIPB3-206ENST00000534903 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
NPIPB3-206ENST00000534903 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
NPIPB3-206ENST00000534903 KDM5BQ9UGL1 1544 aa8.35□□□□□ -1.07
NPIPB3-206ENST00000534903 HRCP23327 699 aa8.35□□□□□ -1.07
NPIPB3-206ENST00000534903 RRBP1Q9P2E9 1410 aaKnown RBP8.35□□□□□ -1.07
NPIPB3-206ENST00000534903 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
NPIPB3-206ENST00000534903 ILDR2Q71H61 639 aa8.34□□□□□ -1.07
NPIPB3-206ENST00000534903 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
NPIPB3-206ENST00000534903 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms