RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 KIF27Q86VH2 1401 aa9.62□□□□□ -0.87
RAG1-203ENST00000534663 HNRNPUQ00839 825 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAG1-203ENST00000534663 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
RAG1-203ENST00000534663 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
RAG1-203ENST00000534663 POLR3GLQ9BT43 218 aa9.58□□□□□ -0.88
RAG1-203ENST00000534663 TONSLQ96HA7 1378 aa9.58□□□□□ -0.88
RAG1-203ENST00000534663 SETD5Q9C0A6 1442 aa9.57□□□□□ -0.88
RAG1-203ENST00000534663 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
RAG1-203ENST00000534663 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
RAG1-203ENST00000534663 RRBP1Q9P2E9 1410 aaKnown RBP9.55□□□□□ -0.88
RAG1-203ENST00000534663 CUX2O14529 1486 aa9.55□□□□□ -0.88
RAG1-203ENST00000534663 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
RAG1-203ENST00000534663 ARHGAP35Q9NRY4 1499 aa9.54□□□□□ -0.88
RAG1-203ENST00000534663 FAM9BQ8IZU0 186 aa9.54□□□□□ -0.88
RAG1-203ENST00000534663 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
RAG1-203ENST00000534663 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
RAG1-203ENST00000534663 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
RAG1-203ENST00000534663 BCL11AQ9H165 835 aa9.53□□□□□ -0.88
RAG1-203ENST00000534663 TOP2BQ02880 1626 aa9.52□□□□□ -0.88
RAG1-203ENST00000534663 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.89
RAG1-203ENST00000534663 WDR97A6NE52 1622 aa9.52□□□□□ -0.89
RAG1-203ENST00000534663 RRP7BPQ9NSQ0 103 aa9.52□□□□□ -0.89
RAG1-203ENST00000534663 CUX1P39880 1505 aa9.49□□□□□ -0.89
RAG1-203ENST00000534663 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
RAG1-203ENST00000534663 FHOD3Q2V2M9 1422 aa9.48□□□□□ -0.89
RAG1-203ENST00000534663 IGF1RP08069 1367 aa9.48□□□□□ -0.89
RAG1-203ENST00000534663 MTUS2Q5JR59 1369 aa9.48□□□□□ -0.89
RAG1-203ENST00000534663 CCER2I3L3R5 266 aa9.47□□□□□ -0.89
RAG1-203ENST00000534663 ZNF326Q5BKZ1 582 aaKnown RBP9.47□□□□□ -0.89
RAG1-203ENST00000534663 MAPKBP1O60336 1514 aa9.46□□□□□ -0.89
RAG1-203ENST00000534663 FOXD1Q16676 465 aa9.46□□□□□ -0.9
RAG1-203ENST00000534663 B4GALNT3Q6L9W6 998 aa9.45□□□□□ -0.9
RAG1-203ENST00000534663 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
RAG1-203ENST00000534663 LRRC9Q6ZRR7 1453 aa9.44□□□□□ -0.9
RAG1-203ENST00000534663 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
RAG1-203ENST00000534663 HSPA5P11021 654 aaKnown RBP9.43□□□□□ -0.9
RAG1-203ENST00000534663 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
RAG1-203ENST00000534663 NBR1Q14596 966 aa9.42□□□□□ -0.9
RAG1-203ENST00000534663 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
RAG1-203ENST00000534663 MSH5O43196 834 aa9.41□□□□□ -0.9
RAG1-203ENST00000534663 EIF4G2P78344 907 aaKnown RBP eCLIP9.41□□□□□ -0.9
RAG1-203ENST00000534663 TIAM1Q13009 1591 aa9.4□□□□□ -0.9
RAG1-203ENST00000534663 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
RAG1-203ENST00000534663 NESP48681 1621 aa9.39□□□□□ -0.91
RAG1-203ENST00000534663 BIVM-ERCC5R4GMW8 1640 aa9.39□□□□□ -0.91
RAG1-203ENST00000534663 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
RAG1-203ENST00000534663 PRDM2Q13029 1718 aa9.38□□□□□ -0.91
RAG1-203ENST00000534663 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
RAG1-203ENST00000534663 FGD5Q6ZNL6 1462 aa9.38□□□□□ -0.91
RAG1-203ENST00000534663 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
RAG1-203ENST00000534663 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
RAG1-203ENST00000534663 WASHC2AQ641Q2 1341 aa9.36□□□□□ -0.91
RAG1-203ENST00000534663 CFTRP13569 1480 aa9.36□□□□□ -0.91
RAG1-203ENST00000534663 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
RAG1-203ENST00000534663 RAD54L2Q9Y4B4 1467 aa9.36□□□□□ -0.91
RAG1-203ENST00000534663 L3MBTL2Q969R5 705 aa9.35□□□□□ -0.91
RAG1-203ENST00000534663 NPM2Q86SE8 214 aaKnown RBP9.34□□□□□ -0.91
RAG1-203ENST00000534663 CADPSQ9ULU8 1353 aa9.34□□□□□ -0.91
RAG1-203ENST00000534663 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
RAG1-203ENST00000534663 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
RAG1-203ENST00000534663 FGD6Q6ZV73 1430 aa9.33□□□□□ -0.92
RAG1-203ENST00000534663 CCDC136Q96JN2 1154 aa9.33□□□□□ -0.92
RAG1-203ENST00000534663 PCF11O94913 1555 aaKnown RBP9.33□□□□□ -0.92
RAG1-203ENST00000534663 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
RAG1-203ENST00000534663 MPHOSPH9Q99550 1183 aa9.31□□□□□ -0.92
RAG1-203ENST00000534663 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
RAG1-203ENST00000534663 PRKRIP1Q9H875 184 aaPredicted RBP9.31□□□□□ -0.92
RAG1-203ENST00000534663 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
RAG1-203ENST00000534663 UACAQ9BZF9 1416 aa9.29□□□□□ -0.92
RAG1-203ENST00000534663 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
RAG1-203ENST00000534663 DEKP35659 375 aaKnown RBP9.29□□□□□ -0.92
RAG1-203ENST00000534663 FMN1Q68DA7 1419 aa9.29□□□□□ -0.92
RAG1-203ENST00000534663 KDM2AQ9Y2K7 1162 aa9.28□□□□□ -0.92
RAG1-203ENST00000534663 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
RAG1-203ENST00000534663 FANCIQ9NVI1 1328 aa9.28□□□□□ -0.92
RAG1-203ENST00000534663 ANP32AP39687 249 aaKnown RBP9.28□□□□□ -0.92
RAG1-203ENST00000534663 TMC1Q8TDI8 760 aa9.28□□□□□ -0.92
RAG1-203ENST00000534663 AQRO60306 1485 aaKnown RBP eCLIP9.28□□□□□ -0.92
RAG1-203ENST00000534663 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
RAG1-203ENST00000534663 WDR62O43379 1518 aa9.27□□□□□ -0.93
RAG1-203ENST00000534663 FANCD2Q9BXW9 1451 aa9.26□□□□□ -0.93
RAG1-203ENST00000534663 NOP58Q9Y2X3 529 aaKnown RBP9.26□□□□□ -0.93
RAG1-203ENST00000534663 NAIPQ13075 1403 aa9.26□□□□□ -0.93
RAG1-203ENST00000534663 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
RAG1-203ENST00000534663 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
RAG1-203ENST00000534663 HFM1A2PYH4 1435 aa9.25□□□□□ -0.93
RAG1-203ENST00000534663 NCOA2Q15596 1464 aa9.25□□□□□ -0.93
RAG1-203ENST00000534663 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
RAG1-203ENST00000534663 FYCO1Q9BQS8 1478 aa9.25□□□□□ -0.93
RAG1-203ENST00000534663 PAK3O75914 559 aaPredicted RBP9.25□□□□□ -0.93
RAG1-203ENST00000534663 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
RAG1-203ENST00000534663 ZNF644Q9H582 1327 aaPredicted RBP9.24□□□□□ -0.93
RAG1-203ENST00000534663 ZBTB47Q9UFB7 747 aaPredicted RBP9.24□□□□□ -0.93
RAG1-203ENST00000534663 KIF7Q2M1P5 1343 aa9.23□□□□□ -0.93
RAG1-203ENST00000534663 FBLN2P98095 1184 aa9.23□□□□□ -0.93
RAG1-203ENST00000534663 CCDC7Q96M83 1385 aa9.23□□□□□ -0.93
RAG1-203ENST00000534663 ZBED9Q6R2W3 1325 aa9.23□□□□□ -0.93
RAG1-203ENST00000534663 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
RAG1-203ENST00000534663 CNTLNQ9NXG0 1405 aa9.22□□□□□ -0.93
RAG1-203ENST00000534663 MRC2Q9UBG0 1479 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms