RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, human

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK1-215	ENST00000533778	JPH4	Q96JJ6	628 aa		32.85	■■■□□ 2.85
CHEK1-215	ENST00000533778	RIMBP3C	A6NJZ7	1639 aa		32.84	■■■□□ 2.85
CHEK1-215	ENST00000533778	RIMBP3B	A6NNM3	1639 aa		32.84	■■■□□ 2.85
CHEK1-215	ENST00000533778	RIMBP3	Q9UFD9	1639 aa		32.84	■■■□□ 2.85
CHEK1-215	ENST00000533778	SHROOM2	Q13796	1616 aa		32.74	■■■□□ 2.83
CHEK1-215	ENST00000533778	PRG4	Q92954	1404 aa	Predicted RBP	32.72	■■■□□ 2.83
CHEK1-215	ENST00000533778	CYB5RL	Q6IPT4	315 aa		32.7	■■■□□ 2.83
CHEK1-215	ENST00000533778	ARAP1	Q96P48	1450 aa		32.66	■■■□□ 2.82
CHEK1-215	ENST00000533778	IQGAP2	Q13576	1575 aa		32.66	■■■□□ 2.82
CHEK1-215	ENST00000533778	KIF21B	O75037	1637 aa		32.59	■■■□□ 2.81
CHEK1-215	ENST00000533778	ERCC6L2	Q5T890	1561 aa		32.59	■■■□□ 2.81
CHEK1-215	ENST00000533778	CARMIL2	Q6F5E8	1435 aa		32.58	■■■□□ 2.81
CHEK1-215	ENST00000533778	UGGT2	Q9NYU1	1516 aa		32.51	■■■□□ 2.8
CHEK1-215	ENST00000533778	CTTNBP2	Q8WZ74	1663 aa		32.5	■■■□□ 2.79
CHEK1-215	ENST00000533778	GOLGA3	Q08378	1498 aa		32.49	■■■□□ 2.79
CHEK1-215	ENST00000533778	UBTF	P17480	764 aa	Known RBP	32.47	■■■□□ 2.79
CHEK1-215	ENST00000533778	TNIK	Q9UKE5	1360 aa		32.44	■■■□□ 2.78
CHEK1-215	ENST00000533778	EHMT2	Q96KQ7	1210 aa		32.43	■■■□□ 2.78
CHEK1-215	ENST00000533778	DISP1	Q96F81	1524 aa		32.41	■■■□□ 2.78
CHEK1-215	ENST00000533778	PTPRG	P23470	1445 aa		32.4	■■■□□ 2.78
CHEK1-215	ENST00000533778	KIAA0556	O60303	1618 aa		32.33	■■■□□ 2.77
CHEK1-215	ENST00000533778	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.31	■■■□□ 2.76
CHEK1-215	ENST00000533778	RANGAP1	P46060	587 aa	Predicted RBP	32.27	■■■□□ 2.76
CHEK1-215	ENST00000533778	NPM1	P06748	294 aa	Known RBP eCLIP	32.21	■■■□□ 2.75
CHEK1-215	ENST00000533778	P3H3	Q8IVL6	736 aa		32.21	■■■□□ 2.75
CHEK1-215	ENST00000533778	SAMD9	Q5K651	1589 aa		32.17	■■■□□ 2.74
CHEK1-215	ENST00000533778	UACA	Q9BZF9	1416 aa		32.17	■■■□□ 2.74
CHEK1-215	ENST00000533778	EFCAB5	A4FU69	1503 aa		32.15	■■■□□ 2.74
CHEK1-215	ENST00000533778	UHRF1BP1L	A0JNW5	1464 aa		32.11	■■■□□ 2.73
CHEK1-215	ENST00000533778	ADCY10	Q96PN6	1610 aa		32.08	■■■□□ 2.73
CHEK1-215	ENST00000533778	ABCC2	Q92887	1545 aa		32.05	■■■□□ 2.72
CHEK1-215	ENST00000533778	FHOD3	Q2V2M9	1422 aa		32.04	■■■□□ 2.72
CHEK1-215	ENST00000533778	PLB1	Q6P1J6	1458 aa		32.03	■■■□□ 2.72
CHEK1-215	ENST00000533778	TRH	P20396	242 aa	Predicted RBP	31.99	■■■□□ 2.71
CHEK1-215	ENST00000533778	ARHGAP35	Q9NRY4	1499 aa		31.98	■■■□□ 2.71
CHEK1-215	ENST00000533778	LOC105371045	A0A1W2PR82	267 aa		31.97	■■■□□ 2.71
CHEK1-215	ENST00000533778	ABCA8	O94911	1581 aa		31.97	■■■□□ 2.71
CHEK1-215	ENST00000533778	KDM5B	Q9UGL1	1544 aa		31.93	■■■□□ 2.7
CHEK1-215	ENST00000533778	CLIP1	P30622	1438 aa		31.92	■■■□□ 2.7
CHEK1-215	ENST00000533778	MAPKBP1	O60336	1514 aa		31.91	■■■□□ 2.7
CHEK1-215	ENST00000533778	FMN1	Q68DA7	1419 aa		31.91	■■■□□ 2.7
CHEK1-215	ENST00000533778	RAPGEF6	Q8TEU7	1601 aa		31.83	■■■□□ 2.69
CHEK1-215	ENST00000533778	CEP162	Q5TB80	1403 aa		31.81	■■■□□ 2.68
CHEK1-215	ENST00000533778	ASXL2	Q76L83	1435 aa		31.81	■■■□□ 2.68
CHEK1-215	ENST00000533778	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.78	■■■□□ 2.68
CHEK1-215	ENST00000533778	ARID3C	A6NKF2	412 aa		31.77	■■■□□ 2.68
CHEK1-215	ENST00000533778	ABCC10	Q5T3U5	1492 aa		31.77	■■■□□ 2.68
CHEK1-215	ENST00000533778	ATP10B	O94823	1461 aa		31.76	■■■□□ 2.67
CHEK1-215	ENST00000533778	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.75	■■■□□ 2.67
CHEK1-215	ENST00000533778	FAM69C	Q0P6D2	419 aa		31.75	■■■□□ 2.67
CHEK1-215	ENST00000533778	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.75	■■■□□ 2.67
CHEK1-215	ENST00000533778	NUP153	P49790	1475 aa	Known RBP	31.75	■■■□□ 2.67
CHEK1-215	ENST00000533778	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.73	■■■□□ 2.67
CHEK1-215	ENST00000533778	WDR7	Q9Y4E6	1490 aa		31.68	■■■□□ 2.66
CHEK1-215	ENST00000533778	CASKIN1	Q8WXD9	1431 aa		31.64	■■■□□ 2.66
CHEK1-215	ENST00000533778	HECW1	Q76N89	1606 aa		31.64	■■■□□ 2.65
CHEK1-215	ENST00000533778	PLEKHD1	A6NEE1	506 aa		31.63	■■■□□ 2.65
CHEK1-215	ENST00000533778	DIP2B	Q9P265	1576 aa		31.63	■■■□□ 2.65
CHEK1-215	ENST00000533778	EPRS	P07814	1512 aa	Known RBP	31.6	■■■□□ 2.65
CHEK1-215	ENST00000533778	KCNH8	Q96L42	1107 aa		31.6	■■■□□ 2.65
CHEK1-215	ENST00000533778	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.58	■■■□□ 2.65
CHEK1-215	ENST00000533778	GLI2	P10070	1586 aa		31.56	■■■□□ 2.64
CHEK1-215	ENST00000533778	FYCO1	Q9BQS8	1478 aa		31.56	■■■□□ 2.64
CHEK1-215	ENST00000533778	KIF13A	Q9H1H9	1805 aa		31.54	■■■□□ 2.64
CHEK1-215	ENST00000533778	PCF11	O94913	1555 aa	Known RBP	31.52	■■■□□ 2.64
CHEK1-215	ENST00000533778	CDK13	Q14004	1512 aa	Known RBP	31.51	■■■□□ 2.63
CHEK1-215	ENST00000533778	CCDC18	Q5T9S5	1454 aa		31.5	■■■□□ 2.63
CHEK1-215	ENST00000533778	VPS8	Q8N3P4	1428 aa		31.43	■■■□□ 2.62
CHEK1-215	ENST00000533778	CD109	Q6YHK3	1445 aa		31.4	■■■□□ 2.62
CHEK1-215	ENST00000533778	MAP3K4	Q9Y6R4	1608 aa		31.36	■■■□□ 2.61
CHEK1-215	ENST00000533778	TRO	Q12816	1431 aa	Predicted RBP	31.36	■■■□□ 2.61
CHEK1-215	ENST00000533778	TEX14	Q8IWB6	1497 aa		31.33	■■■□□ 2.61
CHEK1-215	ENST00000533778	CFAP43	Q8NDM7	1665 aa		31.32	■■■□□ 2.6
CHEK1-215	ENST00000533778	ABCA9	Q8IUA7	1624 aa		31.31	■■■□□ 2.6
CHEK1-215	ENST00000533778	MAGI3	Q5TCQ9	1506 aa		31.3	■■■□□ 2.6
CHEK1-215	ENST00000533778	LRRIQ1	Q96JM4	1722 aa		31.29	■■■□□ 2.6
CHEK1-215	ENST00000533778	TSPOAP1	O95153	1857 aa		31.27	■■■□□ 2.6
CHEK1-215	ENST00000533778	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.24	■■■□□ 2.59
CHEK1-215	ENST00000533778	MTUS2	Q5JR59	1369 aa		31.23	■■■□□ 2.59
CHEK1-215	ENST00000533778	KIF14	Q15058	1648 aa		31.21	■■■□□ 2.59
CHEK1-215	ENST00000533778	PPRC1	Q5VV67	1664 aa	Known RBP	31.2	■■■□□ 2.59
CHEK1-215	ENST00000533778	APLP2	Q06481	763 aa		31.2	■■■□□ 2.59
CHEK1-215	ENST00000533778	PHLDB1	Q86UU1	1377 aa		31.18	■■■□□ 2.58
CHEK1-215	ENST00000533778	MAP3K1	Q13233	1512 aa		31.14	■■■□□ 2.58
CHEK1-215	ENST00000533778	TTC37	Q6PGP7	1564 aa		31.14	■■■□□ 2.58
CHEK1-215	ENST00000533778	PLCH2	O75038	1416 aa		31.14	■■■□□ 2.58
CHEK1-215	ENST00000533778	NEO1	Q92859	1461 aa		31.12	■■■□□ 2.57
CHEK1-215	ENST00000533778	TIAM1	Q13009	1591 aa		31.11	■■■□□ 2.57
CHEK1-215	ENST00000533778	EHBP1L1	Q8N3D4	1523 aa		31.1	■■■□□ 2.57
CHEK1-215	ENST00000533778	KDM6B	O15054	1643 aa		31.09	■■■□□ 2.57
CHEK1-215	ENST00000533778	EFCAB2	Q5VUJ9	269 aa		31.09	■■■□□ 2.57
CHEK1-215	ENST00000533778	FANCA	O15360	1455 aa		31.08	■■■□□ 2.57
CHEK1-215	ENST00000533778	ARAP3	Q8WWN8	1544 aa		31.05	■■■□□ 2.56
CHEK1-215	ENST00000533778	LRRC9	Q6ZRR7	1453 aa		31.03	■■■□□ 2.56
CHEK1-215	ENST00000533778	AKNA	Q7Z591	1439 aa		31.02	■■■□□ 2.56
CHEK1-215	ENST00000533778	CCNB3	Q8WWL7	1395 aa		31.02	■■■□□ 2.56
CHEK1-215	ENST00000533778	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.01	■■■□□ 2.55
CHEK1-215	ENST00000533778	CFAP74	Q9C0B2	1584 aa		31	■■■□□ 2.55
CHEK1-215	ENST00000533778	MYO5C	Q9NQX4	1742 aa		30.99	■■■□□ 2.55
CHEK1-215	ENST00000533778	KANK4	Q5T7N3	995 aa	Predicted RBP	30.99	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms