RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
SYVN1-215ENST00000533685 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
SYVN1-215ENST00000533685 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
SYVN1-215ENST00000533685 IQGAP2Q13576 1575 aa20.05■□□□□ 0.8
SYVN1-215ENST00000533685 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.8
SYVN1-215ENST00000533685 UGGT2Q9NYU1 1516 aa20.01■□□□□ 0.79
SYVN1-215ENST00000533685 SHROOM2Q13796 1616 aa19.97■□□□□ 0.79
SYVN1-215ENST00000533685 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
SYVN1-215ENST00000533685 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
SYVN1-215ENST00000533685 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
SYVN1-215ENST00000533685 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
SYVN1-215ENST00000533685 CLIP1P30622 1438 aa19.9■□□□□ 0.78
SYVN1-215ENST00000533685 SAMD9Q5K651 1589 aa19.9■□□□□ 0.78
SYVN1-215ENST00000533685 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
SYVN1-215ENST00000533685 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
SYVN1-215ENST00000533685 ARHGAP35Q9NRY4 1499 aa19.86■□□□□ 0.77
SYVN1-215ENST00000533685 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
SYVN1-215ENST00000533685 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
SYVN1-215ENST00000533685 ARAP1Q96P48 1450 aa19.76■□□□□ 0.75
SYVN1-215ENST00000533685 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
SYVN1-215ENST00000533685 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
SYVN1-215ENST00000533685 FHOD3Q2V2M9 1422 aa19.73■□□□□ 0.75
SYVN1-215ENST00000533685 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
SYVN1-215ENST00000533685 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
SYVN1-215ENST00000533685 PTPRGP23470 1445 aa19.7■□□□□ 0.74
SYVN1-215ENST00000533685 VPS8Q8N3P4 1428 aa19.69■□□□□ 0.74
SYVN1-215ENST00000533685 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
SYVN1-215ENST00000533685 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.73
SYVN1-215ENST00000533685 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.73
SYVN1-215ENST00000533685 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.73
SYVN1-215ENST00000533685 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
SYVN1-215ENST00000533685 FYCO1Q9BQS8 1478 aa19.62■□□□□ 0.73
SYVN1-215ENST00000533685 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
SYVN1-215ENST00000533685 ABCA8O94911 1581 aa19.61■□□□□ 0.73
SYVN1-215ENST00000533685 UHRF1BP1LA0JNW5 1464 aa19.61■□□□□ 0.73
SYVN1-215ENST00000533685 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
SYVN1-215ENST00000533685 PLB1Q6P1J6 1458 aa19.57■□□□□ 0.72
SYVN1-215ENST00000533685 RAPGEF6Q8TEU7 1601 aa19.57■□□□□ 0.72
SYVN1-215ENST00000533685 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
SYVN1-215ENST00000533685 HECW1Q76N89 1606 aa19.56■□□□□ 0.72
SYVN1-215ENST00000533685 PCF11O94913 1555 aaKnown RBP19.56■□□□□ 0.72
SYVN1-215ENST00000533685 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
SYVN1-215ENST00000533685 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
SYVN1-215ENST00000533685 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
SYVN1-215ENST00000533685 KDM5BQ9UGL1 1544 aa19.49■□□□□ 0.71
SYVN1-215ENST00000533685 ADCY10Q96PN6 1610 aa19.48■□□□□ 0.71
SYVN1-215ENST00000533685 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
SYVN1-215ENST00000533685 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
SYVN1-215ENST00000533685 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
SYVN1-215ENST00000533685 ATP10BO94823 1461 aa19.43■□□□□ 0.7
SYVN1-215ENST00000533685 TIAM1Q13009 1591 aa19.41■□□□□ 0.7
SYVN1-215ENST00000533685 APLP2Q06481 763 aa19.41■□□□□ 0.7
SYVN1-215ENST00000533685 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
SYVN1-215ENST00000533685 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
SYVN1-215ENST00000533685 CDK13Q14004 1512 aaKnown RBP19.38■□□□□ 0.69
SYVN1-215ENST00000533685 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
SYVN1-215ENST00000533685 LRRIQ1Q96JM4 1722 aa19.37■□□□□ 0.69
SYVN1-215ENST00000533685 ZCCHC11Q5TAX3 1644 aaKnown RBP19.37■□□□□ 0.69
SYVN1-215ENST00000533685 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
SYVN1-215ENST00000533685 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
SYVN1-215ENST00000533685 LRRC9Q6ZRR7 1453 aa19.34■□□□□ 0.69
SYVN1-215ENST00000533685 TROQ12816 1431 aaPredicted RBP19.33■□□□□ 0.68
SYVN1-215ENST00000533685 EHBP1L1Q8N3D4 1523 aa19.32■□□□□ 0.68
SYVN1-215ENST00000533685 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
SYVN1-215ENST00000533685 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
SYVN1-215ENST00000533685 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
SYVN1-215ENST00000533685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
SYVN1-215ENST00000533685 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
SYVN1-215ENST00000533685 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
SYVN1-215ENST00000533685 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
SYVN1-215ENST00000533685 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
SYVN1-215ENST00000533685 KANK4Q5T7N3 995 aaPredicted RBP19.24■□□□□ 0.67
SYVN1-215ENST00000533685 KIF14Q15058 1648 aa19.22■□□□□ 0.67
SYVN1-215ENST00000533685 SUPT6HQ7KZ85 1726 aaKnown RBP19.2■□□□□ 0.66
SYVN1-215ENST00000533685 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
SYVN1-215ENST00000533685 GLI2P10070 1586 aa19.17■□□□□ 0.66
SYVN1-215ENST00000533685 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
SYVN1-215ENST00000533685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.14■□□□□ 0.65
SYVN1-215ENST00000533685 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.65
SYVN1-215ENST00000533685 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
SYVN1-215ENST00000533685 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
SYVN1-215ENST00000533685 MYOM3Q5VTT5 1437 aa19.1■□□□□ 0.65
SYVN1-215ENST00000533685 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
SYVN1-215ENST00000533685 MIA2Q96PC5 1412 aa19.09■□□□□ 0.65
SYVN1-215ENST00000533685 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
SYVN1-215ENST00000533685 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
SYVN1-215ENST00000533685 PHLDB1Q86UU1 1377 aa19.08■□□□□ 0.65
SYVN1-215ENST00000533685 TTC37Q6PGP7 1564 aa19.08■□□□□ 0.65
SYVN1-215ENST00000533685 PLCH2O75038 1416 aa19.08■□□□□ 0.64
SYVN1-215ENST00000533685 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
SYVN1-215ENST00000533685 MAP3K4Q9Y6R4 1608 aa19.05■□□□□ 0.64
SYVN1-215ENST00000533685 PREX2Q70Z35 1606 aa19.04■□□□□ 0.64
SYVN1-215ENST00000533685 CD109Q6YHK3 1445 aa19.03■□□□□ 0.64
SYVN1-215ENST00000533685 FGD6Q6ZV73 1430 aa19.03■□□□□ 0.64
SYVN1-215ENST00000533685 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
SYVN1-215ENST00000533685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.03■□□□□ 0.64
SYVN1-215ENST00000533685 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
SYVN1-215ENST00000533685 FAM69CQ0P6D2 419 aa19.02■□□□□ 0.64
SYVN1-215ENST00000533685 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.63
SYVN1-215ENST00000533685 PPARGC1BQ86YN6 1023 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms