RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
COMMD9-208ENST00000533643 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
COMMD9-208ENST00000533643 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
COMMD9-208ENST00000533643 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
COMMD9-208ENST00000533643 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
COMMD9-208ENST00000533643 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
COMMD9-208ENST00000533643 JPH4Q96JJ6 628 aa19.33■□□□□ 0.68
COMMD9-208ENST00000533643 SHROOM2Q13796 1616 aa19.27■□□□□ 0.68
COMMD9-208ENST00000533643 UGGT2Q9NYU1 1516 aa19.26■□□□□ 0.67
COMMD9-208ENST00000533643 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
COMMD9-208ENST00000533643 PRG4Q92954 1404 aaPredicted RBP19.25■□□□□ 0.67
COMMD9-208ENST00000533643 DISP1Q96F81 1524 aa19.2■□□□□ 0.66
COMMD9-208ENST00000533643 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
COMMD9-208ENST00000533643 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
COMMD9-208ENST00000533643 CARMIL2Q6F5E8 1435 aa19.18■□□□□ 0.66
COMMD9-208ENST00000533643 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
COMMD9-208ENST00000533643 CLIP1P30622 1438 aa19.17■□□□□ 0.66
COMMD9-208ENST00000533643 P3H3Q8IVL6 736 aa19.16■□□□□ 0.66
COMMD9-208ENST00000533643 SAMD9Q5K651 1589 aa19.15■□□□□ 0.66
COMMD9-208ENST00000533643 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
COMMD9-208ENST00000533643 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
COMMD9-208ENST00000533643 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
COMMD9-208ENST00000533643 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
COMMD9-208ENST00000533643 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
COMMD9-208ENST00000533643 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
COMMD9-208ENST00000533643 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
COMMD9-208ENST00000533643 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
COMMD9-208ENST00000533643 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
COMMD9-208ENST00000533643 PTPRGP23470 1445 aa19.07■□□□□ 0.64
COMMD9-208ENST00000533643 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
COMMD9-208ENST00000533643 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
COMMD9-208ENST00000533643 FMN1Q68DA7 1419 aa18.98■□□□□ 0.63
COMMD9-208ENST00000533643 PLB1Q6P1J6 1458 aa18.96■□□□□ 0.63
COMMD9-208ENST00000533643 UACAQ9BZF9 1416 aa18.94■□□□□ 0.62
COMMD9-208ENST00000533643 ABCA8O94911 1581 aa18.93■□□□□ 0.62
COMMD9-208ENST00000533643 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
COMMD9-208ENST00000533643 CASKIN1Q8WXD9 1431 aa18.9■□□□□ 0.62
COMMD9-208ENST00000533643 UHRF1BP1LA0JNW5 1464 aa18.9■□□□□ 0.62
COMMD9-208ENST00000533643 ABCC2Q92887 1545 aa18.89■□□□□ 0.61
COMMD9-208ENST00000533643 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.61
COMMD9-208ENST00000533643 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
COMMD9-208ENST00000533643 ADCY10Q96PN6 1610 aa18.86■□□□□ 0.61
COMMD9-208ENST00000533643 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
COMMD9-208ENST00000533643 NUP153P49790 1475 aaKnown RBP18.86■□□□□ 0.61
COMMD9-208ENST00000533643 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
COMMD9-208ENST00000533643 ARID3CA6NKF2 412 aa18.83■□□□□ 0.6
COMMD9-208ENST00000533643 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
COMMD9-208ENST00000533643 ATP10BO94823 1461 aa18.81■□□□□ 0.6
COMMD9-208ENST00000533643 KDM5BQ9UGL1 1544 aa18.8■□□□□ 0.6
COMMD9-208ENST00000533643 EPRSP07814 1512 aaKnown RBP18.79■□□□□ 0.6
COMMD9-208ENST00000533643 NPM1P06748 294 aaKnown RBP eCLIP18.78■□□□□ 0.6
COMMD9-208ENST00000533643 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
COMMD9-208ENST00000533643 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
COMMD9-208ENST00000533643 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
COMMD9-208ENST00000533643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
COMMD9-208ENST00000533643 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
COMMD9-208ENST00000533643 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
COMMD9-208ENST00000533643 APLP2Q06481 763 aa18.7■□□□□ 0.58
COMMD9-208ENST00000533643 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
COMMD9-208ENST00000533643 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
COMMD9-208ENST00000533643 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
COMMD9-208ENST00000533643 ASXL2Q76L83 1435 aa18.67■□□□□ 0.58
COMMD9-208ENST00000533643 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
COMMD9-208ENST00000533643 MAPKBP1O60336 1514 aa18.65■□□□□ 0.58
COMMD9-208ENST00000533643 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
COMMD9-208ENST00000533643 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
COMMD9-208ENST00000533643 MAGI3Q5TCQ9 1506 aa18.64■□□□□ 0.58
COMMD9-208ENST00000533643 WDR7Q9Y4E6 1490 aa18.64■□□□□ 0.57
COMMD9-208ENST00000533643 TROQ12816 1431 aaPredicted RBP18.62■□□□□ 0.57
COMMD9-208ENST00000533643 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
COMMD9-208ENST00000533643 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
COMMD9-208ENST00000533643 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
COMMD9-208ENST00000533643 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
COMMD9-208ENST00000533643 EHBP1L1Q8N3D4 1523 aa18.56■□□□□ 0.56
COMMD9-208ENST00000533643 ABCC10Q5T3U5 1492 aa18.54■□□□□ 0.56
COMMD9-208ENST00000533643 KIF14Q15058 1648 aa18.52■□□□□ 0.56
COMMD9-208ENST00000533643 FAM69CQ0P6D2 419 aa18.51■□□□□ 0.55
COMMD9-208ENST00000533643 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
COMMD9-208ENST00000533643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
COMMD9-208ENST00000533643 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
COMMD9-208ENST00000533643 GLI2P10070 1586 aa18.49■□□□□ 0.55
COMMD9-208ENST00000533643 SUPT6HQ7KZ85 1726 aaKnown RBP18.46■□□□□ 0.55
COMMD9-208ENST00000533643 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
COMMD9-208ENST00000533643 TTC37Q6PGP7 1564 aa18.46■□□□□ 0.55
COMMD9-208ENST00000533643 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
COMMD9-208ENST00000533643 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
COMMD9-208ENST00000533643 CD109Q6YHK3 1445 aa18.43■□□□□ 0.54
COMMD9-208ENST00000533643 KIF13AQ9H1H9 1805 aa18.43■□□□□ 0.54
COMMD9-208ENST00000533643 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
COMMD9-208ENST00000533643 GPATCH8Q9UKJ3 1502 aaKnown RBP18.42■□□□□ 0.54
COMMD9-208ENST00000533643 PLCH2O75038 1416 aa18.4■□□□□ 0.54
COMMD9-208ENST00000533643 MAP3K4Q9Y6R4 1608 aa18.4■□□□□ 0.54
COMMD9-208ENST00000533643 MYOM3Q5VTT5 1437 aa18.38■□□□□ 0.53
COMMD9-208ENST00000533643 CDC42BPAQ5VT25 1732 aa18.36■□□□□ 0.53
COMMD9-208ENST00000533643 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
COMMD9-208ENST00000533643 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
COMMD9-208ENST00000533643 ARAP3Q8WWN8 1544 aa18.35■□□□□ 0.53
COMMD9-208ENST00000533643 EFCAB2Q5VUJ9 269 aa18.35■□□□□ 0.53
COMMD9-208ENST00000533643 PREX2Q70Z35 1606 aa18.34■□□□□ 0.53
COMMD9-208ENST00000533643 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms