RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
PMS2P3-208ENST00000533167 FBLN2P98095 1184 aa13.78□□□□□ -0.2
PMS2P3-208ENST00000533167 CHD1O14646 1710 aa13.77□□□□□ -0.21
PMS2P3-208ENST00000533167 ARHGAP35Q9NRY4 1499 aa13.76□□□□□ -0.21
PMS2P3-208ENST00000533167 CLIP1P30622 1438 aa13.76□□□□□ -0.21
PMS2P3-208ENST00000533167 CLASP1Q7Z460 1538 aa13.75□□□□□ -0.21
PMS2P3-208ENST00000533167 UGGT2Q9NYU1 1516 aa13.75□□□□□ -0.21
PMS2P3-208ENST00000533167 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
PMS2P3-208ENST00000533167 CTTNBP2Q8WZ74 1663 aa13.73□□□□□ -0.21
PMS2P3-208ENST00000533167 ARAP1Q96P48 1450 aa13.72□□□□□ -0.21
PMS2P3-208ENST00000533167 DISP1Q96F81 1524 aa13.71□□□□□ -0.21
PMS2P3-208ENST00000533167 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
PMS2P3-208ENST00000533167 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
PMS2P3-208ENST00000533167 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
PMS2P3-208ENST00000533167 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
PMS2P3-208ENST00000533167 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
PMS2P3-208ENST00000533167 FHOD3Q2V2M9 1422 aa13.65□□□□□ -0.22
PMS2P3-208ENST00000533167 RANGAP1P46060 587 aaPredicted RBP13.64□□□□□ -0.23
PMS2P3-208ENST00000533167 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
PMS2P3-208ENST00000533167 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
PMS2P3-208ENST00000533167 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
PMS2P3-208ENST00000533167 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
PMS2P3-208ENST00000533167 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
PMS2P3-208ENST00000533167 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
PMS2P3-208ENST00000533167 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.24
PMS2P3-208ENST00000533167 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
PMS2P3-208ENST00000533167 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
PMS2P3-208ENST00000533167 PTPRGP23470 1445 aa13.52□□□□□ -0.25
PMS2P3-208ENST00000533167 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
PMS2P3-208ENST00000533167 ABCA8O94911 1581 aa13.5□□□□□ -0.25
PMS2P3-208ENST00000533167 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
PMS2P3-208ENST00000533167 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
PMS2P3-208ENST00000533167 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
PMS2P3-208ENST00000533167 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
PMS2P3-208ENST00000533167 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
PMS2P3-208ENST00000533167 UHRF1BP1LA0JNW5 1464 aa13.45□□□□□ -0.26
PMS2P3-208ENST00000533167 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
PMS2P3-208ENST00000533167 RAPGEF6Q8TEU7 1601 aa13.43□□□□□ -0.26
PMS2P3-208ENST00000533167 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
PMS2P3-208ENST00000533167 KANK4Q5T7N3 995 aaPredicted RBP13.42□□□□□ -0.26
PMS2P3-208ENST00000533167 ABCC2Q92887 1545 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 HECW1Q76N89 1606 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 ATP10BO94823 1461 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 TTBK1Q5TCY1 1321 aaPredicted RBP13.4□□□□□ -0.26
PMS2P3-208ENST00000533167 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 CDK13Q14004 1512 aaKnown RBP13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 KDM5BQ9UGL1 1544 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
PMS2P3-208ENST00000533167 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
PMS2P3-208ENST00000533167 LRRC9Q6ZRR7 1453 aa13.37□□□□□ -0.27
PMS2P3-208ENST00000533167 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
PMS2P3-208ENST00000533167 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
PMS2P3-208ENST00000533167 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
PMS2P3-208ENST00000533167 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
PMS2P3-208ENST00000533167 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
PMS2P3-208ENST00000533167 APLP2Q06481 763 aa13.31□□□□□ -0.28
PMS2P3-208ENST00000533167 TROQ12816 1431 aaPredicted RBP13.3□□□□□ -0.28
PMS2P3-208ENST00000533167 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
PMS2P3-208ENST00000533167 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
PMS2P3-208ENST00000533167 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
PMS2P3-208ENST00000533167 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.29
PMS2P3-208ENST00000533167 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
PMS2P3-208ENST00000533167 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
PMS2P3-208ENST00000533167 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
PMS2P3-208ENST00000533167 PLEKHD1A6NEE1 506 aa13.24□□□□□ -0.29
PMS2P3-208ENST00000533167 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
PMS2P3-208ENST00000533167 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
PMS2P3-208ENST00000533167 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
PMS2P3-208ENST00000533167 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
PMS2P3-208ENST00000533167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
PMS2P3-208ENST00000533167 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
PMS2P3-208ENST00000533167 KIF14Q15058 1648 aa13.21□□□□□ -0.3
PMS2P3-208ENST00000533167 MAPKBP1O60336 1514 aa13.2□□□□□ -0.3
PMS2P3-208ENST00000533167 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
PMS2P3-208ENST00000533167 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
PMS2P3-208ENST00000533167 SUPT6HQ7KZ85 1726 aaKnown RBP13.17□□□□□ -0.3
PMS2P3-208ENST00000533167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.39e-7■■■□□ 17.5
PMS2P3-208ENST00000533167 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
PMS2P3-208ENST00000533167 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
PMS2P3-208ENST00000533167 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
PMS2P3-208ENST00000533167 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 TCOF1Q13428 1488 aaKnown RBP13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
PMS2P3-208ENST00000533167 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
PMS2P3-208ENST00000533167 PLCH2O75038 1416 aa13.11□□□□□ -0.31
PMS2P3-208ENST00000533167 GLI2P10070 1586 aa13.1□□□□□ -0.31
PMS2P3-208ENST00000533167 ARAP3Q8WWN8 1544 aa13.09□□□□□ -0.31
PMS2P3-208ENST00000533167 ZNF644Q9H582 1327 aaPredicted RBP13.08□□□□□ -0.32
PMS2P3-208ENST00000533167 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
PMS2P3-208ENST00000533167 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
PMS2P3-208ENST00000533167 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
PMS2P3-208ENST00000533167 CFDP1Q9UEE9 299 aaPredicted RBP13.06□□□□□ -0.32
PMS2P3-208ENST00000533167 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms