RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
CSRP1-215ENST00000532313 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
CSRP1-215ENST00000532313 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
CSRP1-215ENST00000532313 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
CSRP1-215ENST00000532313 CYB5RLQ6IPT4 315 aa16.28■□□□□ 0.2
CSRP1-215ENST00000532313 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
CSRP1-215ENST00000532313 KANK1Q14678 1352 aa16.27■□□□□ 0.19
CSRP1-215ENST00000532313 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
CSRP1-215ENST00000532313 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
CSRP1-215ENST00000532313 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
CSRP1-215ENST00000532313 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
CSRP1-215ENST00000532313 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
CSRP1-215ENST00000532313 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
CSRP1-215ENST00000532313 PTPRGP23470 1445 aa16.19■□□□□ 0.18
CSRP1-215ENST00000532313 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
CSRP1-215ENST00000532313 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
CSRP1-215ENST00000532313 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
CSRP1-215ENST00000532313 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
CSRP1-215ENST00000532313 CFTRP13569 1480 aa16.14■□□□□ 0.17
CSRP1-215ENST00000532313 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
CSRP1-215ENST00000532313 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
CSRP1-215ENST00000532313 LAMC3Q9Y6N6 1575 aa16.12■□□□□ 0.17
CSRP1-215ENST00000532313 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
CSRP1-215ENST00000532313 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
CSRP1-215ENST00000532313 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
CSRP1-215ENST00000532313 MLECQ14165 292 aa16.1■□□□□ 0.17
CSRP1-215ENST00000532313 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
CSRP1-215ENST00000532313 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
CSRP1-215ENST00000532313 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
CSRP1-215ENST00000532313 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
CSRP1-215ENST00000532313 FAM69CQ0P6D2 419 aa16.02■□□□□ 0.16
CSRP1-215ENST00000532313 CCDC18Q5T9S5 1454 aa16.01■□□□□ 0.15
CSRP1-215ENST00000532313 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
CSRP1-215ENST00000532313 NESP48681 1621 aa15.99■□□□□ 0.15
CSRP1-215ENST00000532313 GGT6Q6P531 493 aa15.98■□□□□ 0.15
CSRP1-215ENST00000532313 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
CSRP1-215ENST00000532313 ANP32CO43423 234 aa15.98■□□□□ 0.15
CSRP1-215ENST00000532313 SPAG9O60271 1321 aaKnown RBP15.97■□□□□ 0.15
CSRP1-215ENST00000532313 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
CSRP1-215ENST00000532313 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
CSRP1-215ENST00000532313 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
CSRP1-215ENST00000532313 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
CSRP1-215ENST00000532313 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
CSRP1-215ENST00000532313 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
CSRP1-215ENST00000532313 POGKQ9P215 609 aa15.92■□□□□ 0.14
CSRP1-215ENST00000532313 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
CSRP1-215ENST00000532313 ANKRD30AQ9BXX3 1397 aa15.91■□□□□ 0.14
CSRP1-215ENST00000532313 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
CSRP1-215ENST00000532313 IGF1RP08069 1367 aa15.87■□□□□ 0.13
CSRP1-215ENST00000532313 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
CSRP1-215ENST00000532313 HRCP23327 699 aa15.85■□□□□ 0.13
CSRP1-215ENST00000532313 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
CSRP1-215ENST00000532313 WASHC2CQ9Y4E1 1318 aa15.85■□□□□ 0.13
CSRP1-215ENST00000532313 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
CSRP1-215ENST00000532313 KIF3BO15066 747 aa15.84■□□□□ 0.13
CSRP1-215ENST00000532313 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.12
CSRP1-215ENST00000532313 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.12
CSRP1-215ENST00000532313 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
CSRP1-215ENST00000532313 A0A0G2JS52 829 aa15.81■□□□□ 0.12
CSRP1-215ENST00000532313 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
CSRP1-215ENST00000532313 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
CSRP1-215ENST00000532313 ZBTB7CA1YPR0 619 aa15.79■□□□□ 0.12
CSRP1-215ENST00000532313 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
CSRP1-215ENST00000532313 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
CSRP1-215ENST00000532313 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
CSRP1-215ENST00000532313 ERICH6Q7L0X2 663 aa15.76■□□□□ 0.11
CSRP1-215ENST00000532313 TMC1Q8TDI8 760 aa15.76■□□□□ 0.11
CSRP1-215ENST00000532313 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
CSRP1-215ENST00000532313 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
CSRP1-215ENST00000532313 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
CSRP1-215ENST00000532313 DAXXQ9UER7 740 aaPredicted RBP15.73■□□□□ 0.11
CSRP1-215ENST00000532313 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
CSRP1-215ENST00000532313 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.11
CSRP1-215ENST00000532313 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
CSRP1-215ENST00000532313 MYT1Q01538 1121 aa15.72■□□□□ 0.11
CSRP1-215ENST00000532313 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
CSRP1-215ENST00000532313 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
CSRP1-215ENST00000532313 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
CSRP1-215ENST00000532313 NUP155O75694 1391 aa15.68■□□□□ 0.1
CSRP1-215ENST00000532313 KIAA0586Q9BVV6 1533 aa15.67■□□□□ 0.1
CSRP1-215ENST00000532313 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
CSRP1-215ENST00000532313 CARD11Q9BXL7 1154 aa15.67■□□□□ 0.1
CSRP1-215ENST00000532313 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
CSRP1-215ENST00000532313 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.66■□□□□ 0.1
CSRP1-215ENST00000532313 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
CSRP1-215ENST00000532313 DIEXFQ68CQ4 756 aaKnown RBP15.65■□□□□ 0.1
CSRP1-215ENST00000532313 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
CSRP1-215ENST00000532313 UACAQ9BZF9 1416 aa15.65■□□□□ 0.1
CSRP1-215ENST00000532313 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
CSRP1-215ENST00000532313 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
CSRP1-215ENST00000532313 KNSTRNQ9Y448 316 aa15.62■□□□□ 0.09
CSRP1-215ENST00000532313 PKD2Q13563 968 aa15.62■□□□□ 0.09
CSRP1-215ENST00000532313 CUX1P39880 1505 aa15.6■□□□□ 0.09
CSRP1-215ENST00000532313 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
CSRP1-215ENST00000532313 TIMELESSQ9UNS1 1208 aa15.6■□□□□ 0.09
CSRP1-215ENST00000532313 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
CSRP1-215ENST00000532313 EFCAB5A4FU69 1503 aa15.59■□□□□ 0.09
CSRP1-215ENST00000532313 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
CSRP1-215ENST00000532313 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
CSRP1-215ENST00000532313 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms