RNA–Protein interactions for RNA: ENST00000532157.5

POLB-217, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-217ENST00000532157 CAPN15O75808 1086 aa19.09■□□□□ 0.65
POLB-217ENST00000532157 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
POLB-217ENST00000532157 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
POLB-217ENST00000532157 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
POLB-217ENST00000532157 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
POLB-217ENST00000532157 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
POLB-217ENST00000532157 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
POLB-217ENST00000532157 KIF13AQ9H1H9 1805 aa18.99■□□□□ 0.63
POLB-217ENST00000532157 WDR97A6NE52 1622 aa18.99■□□□□ 0.63
POLB-217ENST00000532157 SOGA1O94964 1423 aa18.99■□□□□ 0.63
POLB-217ENST00000532157 KDM4FA0A1W2PPD8 638 aa18.98■□□□□ 0.63
POLB-217ENST00000532157 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
POLB-217ENST00000532157 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
POLB-217ENST00000532157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
POLB-217ENST00000532157 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
POLB-217ENST00000532157 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
POLB-217ENST00000532157 DSG3P32926 999 aa18.89■□□□□ 0.61
POLB-217ENST00000532157 APLP2Q06481 763 aa18.88■□□□□ 0.61
POLB-217ENST00000532157 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
POLB-217ENST00000532157 SAMD1Q6SPF0 538 aaPredicted RBP18.82■□□□□ 0.6
POLB-217ENST00000532157 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
POLB-217ENST00000532157 CEP170Q5SW79 1584 aa18.78■□□□□ 0.6
POLB-217ENST00000532157 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
POLB-217ENST00000532157 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
POLB-217ENST00000532157 ABCC10Q5T3U5 1492 aa18.74■□□□□ 0.59
POLB-217ENST00000532157 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
POLB-217ENST00000532157 KDM6BO15054 1643 aa18.72■□□□□ 0.59
POLB-217ENST00000532157 SHROOM2Q13796 1616 aa18.71■□□□□ 0.58
POLB-217ENST00000532157 CUX1P39880 1505 aa18.7■□□□□ 0.58
POLB-217ENST00000532157 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
POLB-217ENST00000532157 NUP160Q12769 1436 aa18.67■□□□□ 0.58
POLB-217ENST00000532157 ABCB7O75027 752 aa18.67■□□□□ 0.58
POLB-217ENST00000532157 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
POLB-217ENST00000532157 DIP2BQ9P265 1576 aa18.67■□□□□ 0.58
POLB-217ENST00000532157 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
POLB-217ENST00000532157 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
POLB-217ENST00000532157 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
POLB-217ENST00000532157 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
POLB-217ENST00000532157 TSPOAP1O95153 1857 aa18.58■□□□□ 0.57
POLB-217ENST00000532157 ADGRL1O94910 1474 aa18.58■□□□□ 0.56
POLB-217ENST00000532157 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
POLB-217ENST00000532157 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
POLB-217ENST00000532157 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
POLB-217ENST00000532157 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
POLB-217ENST00000532157 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
POLB-217ENST00000532157 ZBTB22O15209 634 aa18.47■□□□□ 0.55
POLB-217ENST00000532157 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
POLB-217ENST00000532157 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
POLB-217ENST00000532157 PPRC1Q5VV67 1664 aaKnown RBP18.37■□□□□ 0.53
POLB-217ENST00000532157 POLA2Q14181 598 aa18.36■□□□□ 0.53
POLB-217ENST00000532157 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
POLB-217ENST00000532157 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.52
POLB-217ENST00000532157 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.52
POLB-217ENST00000532157 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.52
POLB-217ENST00000532157 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
POLB-217ENST00000532157 COL17A1Q9UMD9 1497 aaPredicted RBP18.32■□□□□ 0.52
POLB-217ENST00000532157 GLI2P10070 1586 aa18.27■□□□□ 0.52
POLB-217ENST00000532157 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
POLB-217ENST00000532157 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
POLB-217ENST00000532157 ASXL2Q76L83 1435 aa18.2■□□□□ 0.5
POLB-217ENST00000532157 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
POLB-217ENST00000532157 SOCS7O14512 581 aa18.19■□□□□ 0.5
POLB-217ENST00000532157 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
POLB-217ENST00000532157 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
POLB-217ENST00000532157 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
POLB-217ENST00000532157 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
POLB-217ENST00000532157 PTPRGP23470 1445 aa18.14■□□□□ 0.49
POLB-217ENST00000532157 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
POLB-217ENST00000532157 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
POLB-217ENST00000532157 CUL7Q14999 1698 aa18.1■□□□□ 0.49
POLB-217ENST00000532157 EPRSP07814 1512 aaKnown RBP18.09■□□□□ 0.49
POLB-217ENST00000532157 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
POLB-217ENST00000532157 TTBK1Q5TCY1 1321 aaPredicted RBP18.04■□□□□ 0.48
POLB-217ENST00000532157 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
POLB-217ENST00000532157 UHRF1BP1LA0JNW5 1464 aa18.03■□□□□ 0.48
POLB-217ENST00000532157 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
POLB-217ENST00000532157 KIF21BO75037 1637 aa18.01■□□□□ 0.47
POLB-217ENST00000532157 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
POLB-217ENST00000532157 PTPRMP28827 1452 aa17.98■□□□□ 0.47
POLB-217ENST00000532157 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
POLB-217ENST00000532157 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
POLB-217ENST00000532157 CARMIL2Q6F5E8 1435 aa17.96■□□□□ 0.47
POLB-217ENST00000532157 PCF11O94913 1555 aaKnown RBP17.96■□□□□ 0.46
POLB-217ENST00000532157 ADAMTSL3P82987 1691 aa17.93■□□□□ 0.46
POLB-217ENST00000532157 ZBTB12Q9Y330 459 aaPredicted RBP17.93■□□□□ 0.46
POLB-217ENST00000532157 ZCCHC11Q5TAX3 1644 aaKnown RBP17.93■□□□□ 0.46
POLB-217ENST00000532157 CERKQ8TCT0 537 aa17.92■□□□□ 0.46
POLB-217ENST00000532157 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
POLB-217ENST00000532157 IGF1RP08069 1367 aa17.9■□□□□ 0.46
POLB-217ENST00000532157 WDR7Q9Y4E6 1490 aa17.87■□□□□ 0.45
POLB-217ENST00000532157 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
POLB-217ENST00000532157 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
POLB-217ENST00000532157 DISP1Q96F81 1524 aa17.83■□□□□ 0.45
POLB-217ENST00000532157 POTEHQ6S545 545 aa17.82■□□□□ 0.44
POLB-217ENST00000532157 IQGAP2Q13576 1575 aa17.82■□□□□ 0.44
POLB-217ENST00000532157 SPATA31D1Q6ZQQ2 1576 aa17.82■□□□□ 0.44
POLB-217ENST00000532157 ARAP3Q8WWN8 1544 aa17.79■□□□□ 0.44
POLB-217ENST00000532157 BCORL1Q5H9F3 1711 aa17.79■□□□□ 0.44
POLB-217ENST00000532157 HSPA2P54652 639 aa17.79■□□□□ 0.44
POLB-217ENST00000532157 MADDQ8WXG6 1647 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms