RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
PPFIA1-220ENST00000532024 IQGAP2Q13576 1575 aa19.43■□□□□ 0.7
PPFIA1-220ENST00000532024 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
PPFIA1-220ENST00000532024 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
PPFIA1-220ENST00000532024 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
PPFIA1-220ENST00000532024 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
PPFIA1-220ENST00000532024 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
PPFIA1-220ENST00000532024 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
PPFIA1-220ENST00000532024 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
PPFIA1-220ENST00000532024 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
PPFIA1-220ENST00000532024 CARMIL2Q6F5E8 1435 aa19.32■□□□□ 0.68
PPFIA1-220ENST00000532024 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
PPFIA1-220ENST00000532024 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
PPFIA1-220ENST00000532024 EHMT2Q96KQ7 1210 aa19.28■□□□□ 0.68
PPFIA1-220ENST00000532024 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
PPFIA1-220ENST00000532024 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
PPFIA1-220ENST00000532024 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
PPFIA1-220ENST00000532024 DISP1Q96F81 1524 aa19.2■□□□□ 0.66
PPFIA1-220ENST00000532024 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
PPFIA1-220ENST00000532024 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
PPFIA1-220ENST00000532024 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
PPFIA1-220ENST00000532024 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
PPFIA1-220ENST00000532024 PTPRGP23470 1445 aa19.15■□□□□ 0.66
PPFIA1-220ENST00000532024 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
PPFIA1-220ENST00000532024 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
PPFIA1-220ENST00000532024 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
PPFIA1-220ENST00000532024 CLIP1P30622 1438 aa19.05■□□□□ 0.64
PPFIA1-220ENST00000532024 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
PPFIA1-220ENST00000532024 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
PPFIA1-220ENST00000532024 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
PPFIA1-220ENST00000532024 UACAQ9BZF9 1416 aa19.02■□□□□ 0.64
PPFIA1-220ENST00000532024 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
PPFIA1-220ENST00000532024 ABCC2Q92887 1545 aa19■□□□□ 0.63
PPFIA1-220ENST00000532024 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
PPFIA1-220ENST00000532024 ADCY10Q96PN6 1610 aa19■□□□□ 0.63
PPFIA1-220ENST00000532024 FMN1Q68DA7 1419 aa19■□□□□ 0.63
PPFIA1-220ENST00000532024 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
PPFIA1-220ENST00000532024 ABCA8O94911 1581 aa18.97■□□□□ 0.63
PPFIA1-220ENST00000532024 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
PPFIA1-220ENST00000532024 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
PPFIA1-220ENST00000532024 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
PPFIA1-220ENST00000532024 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
PPFIA1-220ENST00000532024 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
PPFIA1-220ENST00000532024 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
PPFIA1-220ENST00000532024 ZCCHC11Q5TAX3 1644 aaKnown RBP18.86■□□□□ 0.61
PPFIA1-220ENST00000532024 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
PPFIA1-220ENST00000532024 NUP153P49790 1475 aaKnown RBP18.84■□□□□ 0.61
PPFIA1-220ENST00000532024 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
PPFIA1-220ENST00000532024 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.61
PPFIA1-220ENST00000532024 PCF11O94913 1555 aaKnown RBP18.83■□□□□ 0.6
PPFIA1-220ENST00000532024 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
PPFIA1-220ENST00000532024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
PPFIA1-220ENST00000532024 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
PPFIA1-220ENST00000532024 ATP10BO94823 1461 aa18.79■□□□□ 0.6
PPFIA1-220ENST00000532024 CCDC18Q5T9S5 1454 aa18.79■□□□□ 0.6
PPFIA1-220ENST00000532024 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
PPFIA1-220ENST00000532024 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
PPFIA1-220ENST00000532024 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
PPFIA1-220ENST00000532024 EPRSP07814 1512 aaKnown RBP18.77■□□□□ 0.6
PPFIA1-220ENST00000532024 WDR7Q9Y4E6 1490 aa18.76■□□□□ 0.59
PPFIA1-220ENST00000532024 CDK11AQ9UQ88 783 aaPredicted RBP18.74■□□□□ 0.59
PPFIA1-220ENST00000532024 CDK13Q14004 1512 aaKnown RBP18.74■□□□□ 0.59
PPFIA1-220ENST00000532024 ABCC10Q5T3U5 1492 aa18.72■□□□□ 0.59
PPFIA1-220ENST00000532024 DIP2BQ9P265 1576 aa18.71■□□□□ 0.59
PPFIA1-220ENST00000532024 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
PPFIA1-220ENST00000532024 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
PPFIA1-220ENST00000532024 KIF13AQ9H1H9 1805 aa18.66■□□□□ 0.58
PPFIA1-220ENST00000532024 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
PPFIA1-220ENST00000532024 GLI2P10070 1586 aa18.66■□□□□ 0.58
PPFIA1-220ENST00000532024 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
PPFIA1-220ENST00000532024 APLP2Q06481 763 aa18.63■□□□□ 0.57
PPFIA1-220ENST00000532024 KCNH8Q96L42 1107 aa18.63■□□□□ 0.57
PPFIA1-220ENST00000532024 TROQ12816 1431 aaPredicted RBP18.62■□□□□ 0.57
PPFIA1-220ENST00000532024 KIF14Q15058 1648 aa18.61■□□□□ 0.57
PPFIA1-220ENST00000532024 TIAM1Q13009 1591 aa18.6■□□□□ 0.57
PPFIA1-220ENST00000532024 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
PPFIA1-220ENST00000532024 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
PPFIA1-220ENST00000532024 ABCA9Q8IUA7 1624 aa18.58■□□□□ 0.56
PPFIA1-220ENST00000532024 MAP3K4Q9Y6R4 1608 aa18.58■□□□□ 0.56
PPFIA1-220ENST00000532024 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.56
PPFIA1-220ENST00000532024 CD109Q6YHK3 1445 aa18.55■□□□□ 0.56
PPFIA1-220ENST00000532024 TEX14Q8IWB6 1497 aa18.54■□□□□ 0.56
PPFIA1-220ENST00000532024 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
PPFIA1-220ENST00000532024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.53■□□□□ 0.56
PPFIA1-220ENST00000532024 TSPOAP1O95153 1857 aa18.52■□□□□ 0.55
PPFIA1-220ENST00000532024 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
PPFIA1-220ENST00000532024 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
PPFIA1-220ENST00000532024 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
PPFIA1-220ENST00000532024 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
PPFIA1-220ENST00000532024 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
PPFIA1-220ENST00000532024 PPRC1Q5VV67 1664 aaKnown RBP18.46■□□□□ 0.55
PPFIA1-220ENST00000532024 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
PPFIA1-220ENST00000532024 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
PPFIA1-220ENST00000532024 PLCH2O75038 1416 aa18.43■□□□□ 0.54
PPFIA1-220ENST00000532024 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
PPFIA1-220ENST00000532024 NEO1Q92859 1461 aa18.43■□□□□ 0.54
PPFIA1-220ENST00000532024 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
PPFIA1-220ENST00000532024 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
PPFIA1-220ENST00000532024 FANCAO15360 1455 aa18.42■□□□□ 0.54
PPFIA1-220ENST00000532024 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms