RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PRXQ9BXM0 1461 aa34.6■■■■□ 3.13
CCS-207ENST00000531990 KIAA0586Q9BVV6 1533 aa34.6■■■■□ 3.13
CCS-207ENST00000531990 SHROOM2Q13796 1616 aa34.59■■■■□ 3.13
CCS-207ENST00000531990 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
CCS-207ENST00000531990 JPH4Q96JJ6 628 aa34.52■■■■□ 3.12
CCS-207ENST00000531990 IQGAP2Q13576 1575 aa34.46■■■■□ 3.11
CCS-207ENST00000531990 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
CCS-207ENST00000531990 PRG4Q92954 1404 aaPredicted RBP34.45■■■■□ 3.11
CCS-207ENST00000531990 CTTNBP2Q8WZ74 1663 aa34.43■■■■□ 3.1
CCS-207ENST00000531990 ERCC6L2Q5T890 1561 aa34.42■■■■□ 3.1
CCS-207ENST00000531990 CYB5RLQ6IPT4 315 aa34.42■■■■□ 3.1
CCS-207ENST00000531990 KIF21BO75037 1637 aa34.37■■■■□ 3.09
CCS-207ENST00000531990 CARMIL2Q6F5E8 1435 aa34.27■■■■□ 3.08
CCS-207ENST00000531990 UGGT2Q9NYU1 1516 aa34.25■■■■□ 3.07
CCS-207ENST00000531990 GOLGA3Q08378 1498 aa34.18■■■■□ 3.06
CCS-207ENST00000531990 DISP1Q96F81 1524 aa34.14■■■■□ 3.06
CCS-207ENST00000531990 EHMT2Q96KQ7 1210 aa34.12■■■■□ 3.05
CCS-207ENST00000531990 KIAA0556O60303 1618 aa34.11■■■■□ 3.05
CCS-207ENST00000531990 TNIKQ9UKE5 1360 aa34.11■■■■□ 3.05
CCS-207ENST00000531990 UBTFP17480 764 aaKnown RBP34.1■■■■□ 3.05
CCS-207ENST00000531990 PTPRGP23470 1445 aa34.07■■■■□ 3.04
CCS-207ENST00000531990 TTBK1Q5TCY1 1321 aaPredicted RBP34.04■■■■□ 3.04
CCS-207ENST00000531990 RANGAP1P46060 587 aaPredicted RBP33.94■■■■□ 3.02
CCS-207ENST00000531990 SAMD9Q5K651 1589 aa33.94■■■■□ 3.02
CCS-207ENST00000531990 ADCY10Q96PN6 1610 aa33.89■■■■□ 3.02
CCS-207ENST00000531990 P3H3Q8IVL6 736 aa33.88■■■■□ 3.01
CCS-207ENST00000531990 EFCAB5A4FU69 1503 aa33.86■■■■□ 3.01
CCS-207ENST00000531990 NPM1P06748 294 aaKnown RBP eCLIP33.85■■■■□ 3.01
CCS-207ENST00000531990 UACAQ9BZF9 1416 aa33.85■■■■□ 3.01
CCS-207ENST00000531990 UHRF1BP1LA0JNW5 1464 aa33.8■■■■□ 3
CCS-207ENST00000531990 ABCC2Q92887 1545 aa33.79■■■■□ 3
CCS-207ENST00000531990 FHOD3Q2V2M9 1422 aa33.74■■■□□ 2.99
CCS-207ENST00000531990 PLB1Q6P1J6 1458 aa33.73■■■□□ 2.99
CCS-207ENST00000531990 ABCA8O94911 1581 aa33.71■■■□□ 2.99
CCS-207ENST00000531990 TRHP20396 242 aaPredicted RBP33.7■■■□□ 2.99
CCS-207ENST00000531990 ARHGAP35Q9NRY4 1499 aa33.67■■■□□ 2.98
CCS-207ENST00000531990 MAPKBP1O60336 1514 aa33.65■■■□□ 2.98
CCS-207ENST00000531990 KDM5BQ9UGL1 1544 aa33.63■■■□□ 2.97
CCS-207ENST00000531990 RAPGEF6Q8TEU7 1601 aa33.61■■■□□ 2.97
CCS-207ENST00000531990 ZCCHC11Q5TAX3 1644 aaKnown RBP33.59■■■□□ 2.97
CCS-207ENST00000531990 CLIP1P30622 1438 aa33.56■■■□□ 2.96
CCS-207ENST00000531990 LOC105371045A0A1W2PR82 267 aa33.55■■■□□ 2.96
CCS-207ENST00000531990 FMN1Q68DA7 1419 aa33.54■■■□□ 2.96
CCS-207ENST00000531990 ASXL2Q76L83 1435 aa33.5■■■□□ 2.95
CCS-207ENST00000531990 ABCC10Q5T3U5 1492 aa33.47■■■□□ 2.95
CCS-207ENST00000531990 KIF13AQ9H1H9 1805 aa33.45■■■□□ 2.95
CCS-207ENST00000531990 ARID3CA6NKF2 412 aa33.45■■■□□ 2.95
CCS-207ENST00000531990 NUP153P49790 1475 aaKnown RBP33.44■■■□□ 2.94
CCS-207ENST00000531990 CEP162Q5TB80 1403 aa33.44■■■□□ 2.94
CCS-207ENST00000531990 ATP10BO94823 1461 aa33.43■■■□□ 2.94
CCS-207ENST00000531990 DIP2BQ9P265 1576 aa33.43■■■□□ 2.94
CCS-207ENST00000531990 FAM69CQ0P6D2 419 aa33.4■■■□□ 2.94
CCS-207ENST00000531990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.39■■■□□ 2.94
CCS-207ENST00000531990 HNRNPUL2Q1KMD3 747 aaKnown RBP33.39■■■□□ 2.94
CCS-207ENST00000531990 HECW1Q76N89 1606 aa33.38■■■□□ 2.93
CCS-207ENST00000531990 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
CCS-207ENST00000531990 ATP1B4Q9UN42 357 aaPredicted RBP33.36■■■□□ 2.93
CCS-207ENST00000531990 EPRSP07814 1512 aaKnown RBP33.3■■■□□ 2.92
CCS-207ENST00000531990 GLI2P10070 1586 aa33.29■■■□□ 2.92
CCS-207ENST00000531990 CASKIN1Q8WXD9 1431 aa33.28■■■□□ 2.92
CCS-207ENST00000531990 PCF11O94913 1555 aaKnown RBP33.27■■■□□ 2.92
CCS-207ENST00000531990 KCNH8Q96L42 1107 aa33.24■■■□□ 2.91
CCS-207ENST00000531990 CDK13Q14004 1512 aaKnown RBP33.23■■■□□ 2.91
CCS-207ENST00000531990 FYCO1Q9BQS8 1478 aa33.23■■■□□ 2.91
CCS-207ENST00000531990 PLEKHD1A6NEE1 506 aa33.21■■■□□ 2.91
CCS-207ENST00000531990 TSPOAP1O95153 1857 aa33.18■■■□□ 2.9
CCS-207ENST00000531990 CCDC18Q5T9S5 1454 aa33.17■■■□□ 2.9
CCS-207ENST00000531990 LRRIQ1Q96JM4 1722 aa33.16■■■□□ 2.9
CCS-207ENST00000531990 CDK11AQ9UQ88 783 aaPredicted RBP33.15■■■□□ 2.9
CCS-207ENST00000531990 MAP3K4Q9Y6R4 1608 aa33.15■■■□□ 2.9
CCS-207ENST00000531990 CFAP43Q8NDM7 1665 aa33.13■■■□□ 2.89
CCS-207ENST00000531990 CD109Q6YHK3 1445 aa33.05■■■□□ 2.88
CCS-207ENST00000531990 ABCA9Q8IUA7 1624 aa33.05■■■□□ 2.88
CCS-207ENST00000531990 VPS8Q8N3P4 1428 aa33.03■■■□□ 2.88
CCS-207ENST00000531990 PPRC1Q5VV67 1664 aaKnown RBP33.03■■■□□ 2.88
CCS-207ENST00000531990 TEX14Q8IWB6 1497 aa33.02■■■□□ 2.88
CCS-207ENST00000531990 TROQ12816 1431 aaPredicted RBP32.99■■■□□ 2.87
CCS-207ENST00000531990 MAGI3Q5TCQ9 1506 aa32.97■■■□□ 2.87
CCS-207ENST00000531990 KIF14Q15058 1648 aa32.95■■■□□ 2.86
CCS-207ENST00000531990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.93■■■□□ 2.86
CCS-207ENST00000531990 TTC37Q6PGP7 1564 aa32.9■■■□□ 2.86
CCS-207ENST00000531990 KDM6BO15054 1643 aa32.88■■■□□ 2.85
CCS-207ENST00000531990 MTUS2Q5JR59 1369 aa32.83■■■□□ 2.85
CCS-207ENST00000531990 TIAM1Q13009 1591 aa32.81■■■□□ 2.84
CCS-207ENST00000531990 MYO5CQ9NQX4 1742 aa32.8■■■□□ 2.84
CCS-207ENST00000531990 EHBP1L1Q8N3D4 1523 aa32.77■■■□□ 2.84
CCS-207ENST00000531990 PHLDB1Q86UU1 1377 aa32.77■■■□□ 2.84
CCS-207ENST00000531990 NEO1Q92859 1461 aa32.77■■■□□ 2.84
CCS-207ENST00000531990 CFAP74Q9C0B2 1584 aa32.77■■■□□ 2.84
CCS-207ENST00000531990 APLP2Q06481 763 aa32.75■■■□□ 2.83
CCS-207ENST00000531990 PLCH2O75038 1416 aa32.75■■■□□ 2.83
CCS-207ENST00000531990 MAP3K1Q13233 1512 aa32.73■■■□□ 2.83
CCS-207ENST00000531990 FANCAO15360 1455 aa32.73■■■□□ 2.83
CCS-207ENST00000531990 ARAP3Q8WWN8 1544 aa32.72■■■□□ 2.83
CCS-207ENST00000531990 COL17A1Q9UMD9 1497 aaPredicted RBP32.67■■■□□ 2.82
CCS-207ENST00000531990 EFCAB2Q5VUJ9 269 aa32.66■■■□□ 2.82
CCS-207ENST00000531990 ARHGAP5Q13017 1502 aa32.66■■■□□ 2.82
CCS-207ENST00000531990 PREX2Q70Z35 1606 aa32.66■■■□□ 2.82
CCS-207ENST00000531990 LRRC9Q6ZRR7 1453 aa32.65■■■□□ 2.82
CCS-207ENST00000531990 CDC42BPAQ5VT25 1732 aa32.64■■■□□ 2.82
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