RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
TRIM53CP-201ENST00000531490 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
TRIM53CP-201ENST00000531490 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
TRIM53CP-201ENST00000531490 PDS5BQ9NTI5 1447 aa13.44□□□□□ -0.26
TRIM53CP-201ENST00000531490 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
TRIM53CP-201ENST00000531490 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
TRIM53CP-201ENST00000531490 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
TRIM53CP-201ENST00000531490 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
TRIM53CP-201ENST00000531490 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
TRIM53CP-201ENST00000531490 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
TRIM53CP-201ENST00000531490 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
TRIM53CP-201ENST00000531490 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
TRIM53CP-201ENST00000531490 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
TRIM53CP-201ENST00000531490 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
TRIM53CP-201ENST00000531490 WDR62O43379 1518 aa13.3□□□□□ -0.28
TRIM53CP-201ENST00000531490 HAX1O00165 279 aa13.24□□□□□ -0.29
TRIM53CP-201ENST00000531490 MIER1Q8N108 512 aa13.24□□□□□ -0.29
TRIM53CP-201ENST00000531490 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
TRIM53CP-201ENST00000531490 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
TRIM53CP-201ENST00000531490 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
TRIM53CP-201ENST00000531490 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
TRIM53CP-201ENST00000531490 WIZO95785 1651 aa13.18□□□□□ -0.3
TRIM53CP-201ENST00000531490 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
TRIM53CP-201ENST00000531490 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
TRIM53CP-201ENST00000531490 EVX2Q03828 476 aa13.16□□□□□ -0.3
TRIM53CP-201ENST00000531490 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
TRIM53CP-201ENST00000531490 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
TRIM53CP-201ENST00000531490 CFTRP13569 1480 aa13.14□□□□□ -0.31
TRIM53CP-201ENST00000531490 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM53CP-201ENST00000531490 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.31
TRIM53CP-201ENST00000531490 ZNF608Q9ULD9 1512 aaPredicted RBP13.07□□□□□ -0.32
TRIM53CP-201ENST00000531490 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
TRIM53CP-201ENST00000531490 RIMBP3CA6NJZ7 1639 aa13.05□□□□□ -0.32
TRIM53CP-201ENST00000531490 RIMBP3BA6NNM3 1639 aa13.05□□□□□ -0.32
TRIM53CP-201ENST00000531490 RIMBP3Q9UFD9 1639 aa13.05□□□□□ -0.32
TRIM53CP-201ENST00000531490 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
TRIM53CP-201ENST00000531490 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
TRIM53CP-201ENST00000531490 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
TRIM53CP-201ENST00000531490 ARHGEF11O15085 1522 aa13.02□□□□□ -0.32
TRIM53CP-201ENST00000531490 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
TRIM53CP-201ENST00000531490 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
TRIM53CP-201ENST00000531490 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
TRIM53CP-201ENST00000531490 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
TRIM53CP-201ENST00000531490 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
TRIM53CP-201ENST00000531490 NUBP1P53384 320 aa12.95□□□□□ -0.34
TRIM53CP-201ENST00000531490 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
TRIM53CP-201ENST00000531490 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
TRIM53CP-201ENST00000531490 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
TRIM53CP-201ENST00000531490 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
TRIM53CP-201ENST00000531490 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM53CP-201ENST00000531490 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
TRIM53CP-201ENST00000531490 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
TRIM53CP-201ENST00000531490 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
TRIM53CP-201ENST00000531490 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
TRIM53CP-201ENST00000531490 GABBR2O75899 941 aa12.86□□□□□ -0.35
TRIM53CP-201ENST00000531490 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
TRIM53CP-201ENST00000531490 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
TRIM53CP-201ENST00000531490 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
TRIM53CP-201ENST00000531490 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
TRIM53CP-201ENST00000531490 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
TRIM53CP-201ENST00000531490 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
TRIM53CP-201ENST00000531490 DNMBPQ6XZF7 1577 aa12.79□□□□□ -0.36
TRIM53CP-201ENST00000531490 CLCN6P51797 869 aa12.79□□□□□ -0.36
TRIM53CP-201ENST00000531490 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
TRIM53CP-201ENST00000531490 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
TRIM53CP-201ENST00000531490 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
TRIM53CP-201ENST00000531490 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
TRIM53CP-201ENST00000531490 CHD1O14646 1710 aa12.77□□□□□ -0.37
TRIM53CP-201ENST00000531490 SOGA1O94964 1423 aa12.74□□□□□ -0.37
TRIM53CP-201ENST00000531490 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
TRIM53CP-201ENST00000531490 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
TRIM53CP-201ENST00000531490 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
TRIM53CP-201ENST00000531490 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
TRIM53CP-201ENST00000531490 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
TRIM53CP-201ENST00000531490 GSE1Q14687 1217 aa12.71□□□□□ -0.37
TRIM53CP-201ENST00000531490 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
TRIM53CP-201ENST00000531490 MAP3K13O43283 966 aa12.69□□□□□ -0.38
TRIM53CP-201ENST00000531490 CLASP1Q7Z460 1538 aa12.68□□□□□ -0.38
TRIM53CP-201ENST00000531490 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
TRIM53CP-201ENST00000531490 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
TRIM53CP-201ENST00000531490 PYGBP11216 843 aa12.66□□□□□ -0.38
TRIM53CP-201ENST00000531490 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
TRIM53CP-201ENST00000531490 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
TRIM53CP-201ENST00000531490 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
TRIM53CP-201ENST00000531490 MAGI1Q96QZ7 1491 aaPredicted RBP12.62□□□□□ -0.39
TRIM53CP-201ENST00000531490 SUPT5HO00267 1087 aaKnown RBP12.61□□□□□ -0.39
TRIM53CP-201ENST00000531490 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
TRIM53CP-201ENST00000531490 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
TRIM53CP-201ENST00000531490 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
TRIM53CP-201ENST00000531490 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
TRIM53CP-201ENST00000531490 CUX1P39880 1505 aa12.61□□□□□ -0.39
TRIM53CP-201ENST00000531490 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
TRIM53CP-201ENST00000531490 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
TRIM53CP-201ENST00000531490 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
TRIM53CP-201ENST00000531490 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
TRIM53CP-201ENST00000531490 ERCC6L2Q5T890 1561 aa12.55□□□□□ -0.4
TRIM53CP-201ENST00000531490 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
TRIM53CP-201ENST00000531490 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
TRIM53CP-201ENST00000531490 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
TRIM53CP-201ENST00000531490 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms