RNA–Protein interactions for RNA: ENST00000531143.6

PPM1A-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best)

Gene PPM1A, Length 1,546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-206ENST00000531143 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.18
PPM1A-206ENST00000531143 DISP3Q9P2K9 1392 aa13.94□□□□□ -0.18
PPM1A-206ENST00000531143 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
PPM1A-206ENST00000531143 SOGA1O94964 1423 aa13.87□□□□□ -0.19
PPM1A-206ENST00000531143 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
PPM1A-206ENST00000531143 DIP2BQ9P265 1576 aa13.86□□□□□ -0.19
PPM1A-206ENST00000531143 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
PPM1A-206ENST00000531143 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
PPM1A-206ENST00000531143 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
PPM1A-206ENST00000531143 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
PPM1A-206ENST00000531143 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
PPM1A-206ENST00000531143 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
PPM1A-206ENST00000531143 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
PPM1A-206ENST00000531143 NUP160Q12769 1436 aa13.71□□□□□ -0.21
PPM1A-206ENST00000531143 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
PPM1A-206ENST00000531143 SHROOM2Q13796 1616 aa13.71□□□□□ -0.21
PPM1A-206ENST00000531143 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.21
PPM1A-206ENST00000531143 COL17A1Q9UMD9 1497 aaPredicted RBP13.7□□□□□ -0.22
PPM1A-206ENST00000531143 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
PPM1A-206ENST00000531143 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
PPM1A-206ENST00000531143 SPATA31D1Q6ZQQ2 1576 aa13.66□□□□□ -0.22
PPM1A-206ENST00000531143 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
PPM1A-206ENST00000531143 PRG4Q92954 1404 aaPredicted RBP13.66□□□□□ -0.22
PPM1A-206ENST00000531143 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
PPM1A-206ENST00000531143 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
PPM1A-206ENST00000531143 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
PPM1A-206ENST00000531143 ADCY10Q96PN6 1610 aa13.62□□□□□ -0.23
PPM1A-206ENST00000531143 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
PPM1A-206ENST00000531143 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
PPM1A-206ENST00000531143 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
PPM1A-206ENST00000531143 CUX1P39880 1505 aa13.54□□□□□ -0.24
PPM1A-206ENST00000531143 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
PPM1A-206ENST00000531143 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
PPM1A-206ENST00000531143 ADAMTS12P58397 1594 aa13.52□□□□□ -0.24
PPM1A-206ENST00000531143 PCF11O94913 1555 aaKnown RBP13.5□□□□□ -0.25
PPM1A-206ENST00000531143 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
PPM1A-206ENST00000531143 PTPRMP28827 1452 aa13.48□□□□□ -0.25
PPM1A-206ENST00000531143 GLI2P10070 1586 aa13.48□□□□□ -0.25
PPM1A-206ENST00000531143 FHAD1B1AJZ9 1412 aa13.46□□□□□ -0.26
PPM1A-206ENST00000531143 ASXL2Q76L83 1435 aa13.44□□□□□ -0.26
PPM1A-206ENST00000531143 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
PPM1A-206ENST00000531143 HSPA2P54652 639 aa13.41□□□□□ -0.26
PPM1A-206ENST00000531143 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
PPM1A-206ENST00000531143 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
PPM1A-206ENST00000531143 KIF21BO75037 1637 aa13.36□□□□□ -0.27
PPM1A-206ENST00000531143 EPRSP07814 1512 aaKnown RBP13.35□□□□□ -0.27
PPM1A-206ENST00000531143 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
PPM1A-206ENST00000531143 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
PPM1A-206ENST00000531143 ADAMTSL3P82987 1691 aa13.33□□□□□ -0.28
PPM1A-206ENST00000531143 PTPRGP23470 1445 aa13.29□□□□□ -0.28
PPM1A-206ENST00000531143 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
PPM1A-206ENST00000531143 ERICH3Q5RHP9 1530 aa13.27□□□□□ -0.29
PPM1A-206ENST00000531143 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
PPM1A-206ENST00000531143 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
PPM1A-206ENST00000531143 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
PPM1A-206ENST00000531143 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
PPM1A-206ENST00000531143 MADDQ8WXG6 1647 aa13.22□□□□□ -0.29
PPM1A-206ENST00000531143 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
PPM1A-206ENST00000531143 UHRF1BP1LA0JNW5 1464 aa13.2□□□□□ -0.3
PPM1A-206ENST00000531143 CUL7Q14999 1698 aa13.19□□□□□ -0.3
PPM1A-206ENST00000531143 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
PPM1A-206ENST00000531143 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
PPM1A-206ENST00000531143 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
PPM1A-206ENST00000531143 KDM5BQ9UGL1 1544 aa13.16□□□□□ -0.3
PPM1A-206ENST00000531143 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
PPM1A-206ENST00000531143 UACAQ9BZF9 1416 aa13.15□□□□□ -0.3
PPM1A-206ENST00000531143 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
PPM1A-206ENST00000531143 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
PPM1A-206ENST00000531143 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
PPM1A-206ENST00000531143 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
PPM1A-206ENST00000531143 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
PPM1A-206ENST00000531143 RIMS1Q86UR5 1692 aaKnown RBP13.1□□□□□ -0.31
PPM1A-206ENST00000531143 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
PPM1A-206ENST00000531143 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
PPM1A-206ENST00000531143 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
PPM1A-206ENST00000531143 KCNA4P22459 653 aa13.07□□□□□ -0.32
PPM1A-206ENST00000531143 ZCCHC11Q5TAX3 1644 aaKnown RBP13.07□□□□□ -0.32
PPM1A-206ENST00000531143 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
PPM1A-206ENST00000531143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
PPM1A-206ENST00000531143 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
PPM1A-206ENST00000531143 STRCQ7RTU9 1775 aa13.03□□□□□ -0.32
PPM1A-206ENST00000531143 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
PPM1A-206ENST00000531143 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
PPM1A-206ENST00000531143 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
PPM1A-206ENST00000531143 PTPRTO14522 1441 aa13.01□□□□□ -0.33
PPM1A-206ENST00000531143 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
PPM1A-206ENST00000531143 HSPA1LP34931 641 aa12.97□□□□□ -0.33
PPM1A-206ENST00000531143 DISP1Q96F81 1524 aa12.96□□□□□ -0.33
PPM1A-206ENST00000531143 FRMPD1Q5SYB0 1578 aa12.95□□□□□ -0.34
PPM1A-206ENST00000531143 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
PPM1A-206ENST00000531143 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
PPM1A-206ENST00000531143 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
PPM1A-206ENST00000531143 IGF1RP08069 1367 aa12.92□□□□□ -0.34
PPM1A-206ENST00000531143 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
PPM1A-206ENST00000531143 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
PPM1A-206ENST00000531143 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
PPM1A-206ENST00000531143 POGZQ7Z3K3 1410 aa12.9□□□□□ -0.34
PPM1A-206ENST00000531143 CEBPAP49715 358 aaPredicted RBP12.9□□□□□ -0.34
PPM1A-206ENST00000531143 MLECQ14165 292 aa12.88□□□□□ -0.35
PPM1A-206ENST00000531143 FANCAO15360 1455 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms