RNA–Protein interactions for RNA: ENST00000530170.1

RPS3-215, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-215ENST00000530170 WDR97A6NE52 1622 aa14.06□□□□□ -0.16
RPS3-215ENST00000530170 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
RPS3-215ENST00000530170 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
RPS3-215ENST00000530170 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
RPS3-215ENST00000530170 CUL7Q14999 1698 aa14.04□□□□□ -0.16
RPS3-215ENST00000530170 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
RPS3-215ENST00000530170 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
RPS3-215ENST00000530170 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
RPS3-215ENST00000530170 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.16
RPS3-215ENST00000530170 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
RPS3-215ENST00000530170 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
RPS3-215ENST00000530170 ADRA2BP18089 450 aa13.98□□□□□ -0.17
RPS3-215ENST00000530170 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
RPS3-215ENST00000530170 EFCAB5A4FU69 1503 aa13.96□□□□□ -0.17
RPS3-215ENST00000530170 CFAP43Q8NDM7 1665 aa13.96□□□□□ -0.17
RPS3-215ENST00000530170 CTTNBP2Q8WZ74 1663 aa13.96□□□□□ -0.17
RPS3-215ENST00000530170 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
RPS3-215ENST00000530170 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
RPS3-215ENST00000530170 KCNA4P22459 653 aa13.95□□□□□ -0.18
RPS3-215ENST00000530170 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
RPS3-215ENST00000530170 IGF1RP08069 1367 aa13.93□□□□□ -0.18
RPS3-215ENST00000530170 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
RPS3-215ENST00000530170 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
RPS3-215ENST00000530170 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
RPS3-215ENST00000530170 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
RPS3-215ENST00000530170 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
RPS3-215ENST00000530170 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
RPS3-215ENST00000530170 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
RPS3-215ENST00000530170 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
RPS3-215ENST00000530170 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
RPS3-215ENST00000530170 APLP2Q06481 763 aa13.86□□□□□ -0.19
RPS3-215ENST00000530170 CCER1Q8TC90 406 aaPredicted RBP13.86□□□□□ -0.19
RPS3-215ENST00000530170 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
RPS3-215ENST00000530170 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
RPS3-215ENST00000530170 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
RPS3-215ENST00000530170 PCF11O94913 1555 aaKnown RBP13.81□□□□□ -0.2
RPS3-215ENST00000530170 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
RPS3-215ENST00000530170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
RPS3-215ENST00000530170 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
RPS3-215ENST00000530170 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
RPS3-215ENST00000530170 PBRM1Q86U86 1689 aa13.75□□□□□ -0.21
RPS3-215ENST00000530170 LRRC9Q6ZRR7 1453 aa13.75□□□□□ -0.21
RPS3-215ENST00000530170 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
RPS3-215ENST00000530170 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
RPS3-215ENST00000530170 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
RPS3-215ENST00000530170 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
RPS3-215ENST00000530170 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
RPS3-215ENST00000530170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPS3-215ENST00000530170 FMN1Q68DA7 1419 aa13.71□□□□□ -0.22
RPS3-215ENST00000530170 KDM6BO15054 1643 aa13.7□□□□□ -0.22
RPS3-215ENST00000530170 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
RPS3-215ENST00000530170 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
RPS3-215ENST00000530170 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
RPS3-215ENST00000530170 DHX57Q6P158 1386 aaKnown RBP13.66□□□□□ -0.22
RPS3-215ENST00000530170 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
RPS3-215ENST00000530170 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
RPS3-215ENST00000530170 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
RPS3-215ENST00000530170 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
RPS3-215ENST00000530170 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
RPS3-215ENST00000530170 LRRIQ1Q96JM4 1722 aa13.63□□□□□ -0.23
RPS3-215ENST00000530170 EHBP1L1Q8N3D4 1523 aa13.63□□□□□ -0.23
RPS3-215ENST00000530170 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
RPS3-215ENST00000530170 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
RPS3-215ENST00000530170 NUP160Q12769 1436 aa13.62□□□□□ -0.23
RPS3-215ENST00000530170 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
RPS3-215ENST00000530170 IQGAP2Q13576 1575 aa13.6□□□□□ -0.23
RPS3-215ENST00000530170 FHOD3Q2V2M9 1422 aa13.6□□□□□ -0.23
RPS3-215ENST00000530170 HECW1Q76N89 1606 aa13.6□□□□□ -0.23
RPS3-215ENST00000530170 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
RPS3-215ENST00000530170 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
RPS3-215ENST00000530170 DIP2BQ9P265 1576 aa13.58□□□□□ -0.23
RPS3-215ENST00000530170 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
RPS3-215ENST00000530170 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
RPS3-215ENST00000530170 MAPKBP1O60336 1514 aa13.57□□□□□ -0.24
RPS3-215ENST00000530170 FOXD1Q16676 465 aa13.56□□□□□ -0.24
RPS3-215ENST00000530170 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
RPS3-215ENST00000530170 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
RPS3-215ENST00000530170 SOCS7O14512 581 aa13.54□□□□□ -0.24
RPS3-215ENST00000530170 DIEXFQ68CQ4 756 aaKnown RBP13.54□□□□□ -0.24
RPS3-215ENST00000530170 TSPOAP1O95153 1857 aa13.54□□□□□ -0.24
RPS3-215ENST00000530170 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
RPS3-215ENST00000530170 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
RPS3-215ENST00000530170 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
RPS3-215ENST00000530170 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
RPS3-215ENST00000530170 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
RPS3-215ENST00000530170 TCOF1Q13428 1488 aaKnown RBP13.49□□□□□ -0.25
RPS3-215ENST00000530170 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
RPS3-215ENST00000530170 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
RPS3-215ENST00000530170 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
RPS3-215ENST00000530170 KIAA0556O60303 1618 aa13.47□□□□□ -0.25
RPS3-215ENST00000530170 NCOA2Q15596 1464 aa13.46□□□□□ -0.25
RPS3-215ENST00000530170 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.26
RPS3-215ENST00000530170 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
RPS3-215ENST00000530170 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
RPS3-215ENST00000530170 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
RPS3-215ENST00000530170 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
RPS3-215ENST00000530170 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
RPS3-215ENST00000530170 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
RPS3-215ENST00000530170 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
RPS3-215ENST00000530170 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms