RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 PRG4Q92954 1404 aaPredicted RBP7.6□□□□□ -1.19
USP47-208ENST00000529813 RIMBP3CA6NJZ7 1639 aa7.59□□□□□ -1.19
USP47-208ENST00000529813 RIMBP3BA6NNM3 1639 aa7.59□□□□□ -1.19
USP47-208ENST00000529813 RIMBP3Q9UFD9 1639 aa7.59□□□□□ -1.19
USP47-208ENST00000529813 ERICH3Q5RHP9 1530 aa7.59□□□□□ -1.19
USP47-208ENST00000529813 ATP1B4Q9UN42 357 aaPredicted RBP7.58□□□□□ -1.2
USP47-208ENST00000529813 WDR97A6NE52 1622 aa7.58□□□□□ -1.2
USP47-208ENST00000529813 ADAMTS12P58397 1594 aa7.58□□□□□ -1.2
USP47-208ENST00000529813 ARAP1Q96P48 1450 aa7.58□□□□□ -1.2
USP47-208ENST00000529813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.57□□□□□ -1.2
USP47-208ENST00000529813 HNRNPUL2Q1KMD3 747 aaKnown RBP7.57□□□□□ -1.2
USP47-208ENST00000529813 CEP170Q5SW79 1584 aa7.56□□□□□ -1.2
USP47-208ENST00000529813 NUP160Q12769 1436 aa7.56□□□□□ -1.2
USP47-208ENST00000529813 RAPGEF2Q9Y4G8 1499 aa7.55□□□□□ -1.2
USP47-208ENST00000529813 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
USP47-208ENST00000529813 CLASP1Q7Z460 1538 aa7.53□□□□□ -1.2
USP47-208ENST00000529813 PTPRGP23470 1445 aa7.53□□□□□ -1.2
USP47-208ENST00000529813 KIAA0586Q9BVV6 1533 aa7.52□□□□□ -1.2
USP47-208ENST00000529813 CARMIL2Q6F5E8 1435 aa7.52□□□□□ -1.21
USP47-208ENST00000529813 FAM69CQ0P6D2 419 aa7.51□□□□□ -1.21
USP47-208ENST00000529813 KCNH8Q96L42 1107 aa7.51□□□□□ -1.21
USP47-208ENST00000529813 CUL7Q14999 1698 aa7.49□□□□□ -1.21
USP47-208ENST00000529813 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
USP47-208ENST00000529813 POTEDQ86YR6 584 aa7.48□□□□□ -1.21
USP47-208ENST00000529813 EEA1Q15075 1411 aa7.47□□□□□ -1.21
USP47-208ENST00000529813 LOC105371045A0A1W2PR82 267 aa7.47□□□□□ -1.21
USP47-208ENST00000529813 PRXQ9BXM0 1461 aa7.46□□□□□ -1.22
USP47-208ENST00000529813 IQGAP2Q13576 1575 aa7.46□□□□□ -1.22
USP47-208ENST00000529813 FHOD3Q2V2M9 1422 aa7.43□□□□□ -1.22
USP47-208ENST00000529813 UACAQ9BZF9 1416 aa7.42□□□□□ -1.22
USP47-208ENST00000529813 GOLGA3Q08378 1498 aa7.41□□□□□ -1.22
USP47-208ENST00000529813 PLB1Q6P1J6 1458 aa7.41□□□□□ -1.22
USP47-208ENST00000529813 DISP1Q96F81 1524 aa7.41□□□□□ -1.22
USP47-208ENST00000529813 SHROOM2Q13796 1616 aa7.39□□□□□ -1.23
USP47-208ENST00000529813 PLEKHD1A6NEE1 506 aa7.38□□□□□ -1.23
USP47-208ENST00000529813 UGGT2Q9NYU1 1516 aa7.37□□□□□ -1.23
USP47-208ENST00000529813 ASXL2Q76L83 1435 aa7.37□□□□□ -1.23
USP47-208ENST00000529813 MYT1LQ9UL68 1186 aa7.37□□□□□ -1.23
USP47-208ENST00000529813 KIAA0556O60303 1618 aa7.36□□□□□ -1.23
USP47-208ENST00000529813 ABCC2Q92887 1545 aa7.35□□□□□ -1.23
USP47-208ENST00000529813 ADCY10Q96PN6 1610 aa7.35□□□□□ -1.23
USP47-208ENST00000529813 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.24
USP47-208ENST00000529813 CLIP1P30622 1438 aa7.33□□□□□ -1.24
USP47-208ENST00000529813 CTTNBP2Q8WZ74 1663 aa7.33□□□□□ -1.24
USP47-208ENST00000529813 ABCC10Q5T3U5 1492 aa7.32□□□□□ -1.24
USP47-208ENST00000529813 KIF21BO75037 1637 aa7.32□□□□□ -1.24
USP47-208ENST00000529813 PLPPR3Q6T4P5 718 aa7.32□□□□□ -1.24
USP47-208ENST00000529813 ZNF777Q9ULD5 760 aaPredicted RBP7.32□□□□□ -1.24
USP47-208ENST00000529813 APLP2Q06481 763 aa7.31□□□□□ -1.24
USP47-208ENST00000529813 CD109Q6YHK3 1445 aa7.3□□□□□ -1.24
USP47-208ENST00000529813 ATP10BO94823 1461 aa7.3□□□□□ -1.24
USP47-208ENST00000529813 TSPOAP1O95153 1857 aa7.3□□□□□ -1.24
USP47-208ENST00000529813 ARHGAP35Q9NRY4 1499 aa7.3□□□□□ -1.24
USP47-208ENST00000529813 FMN1Q68DA7 1419 aa7.29□□□□□ -1.24
USP47-208ENST00000529813 UHRF1BP1LA0JNW5 1464 aa7.29□□□□□ -1.24
USP47-208ENST00000529813 ARID4BQ4LE39 1312 aaPredicted RBP7.29□□□□□ -1.24
USP47-208ENST00000529813 WDR7Q9Y4E6 1490 aa7.29□□□□□ -1.24
USP47-208ENST00000529813 RAPGEF3O95398 923 aa7.29□□□□□ -1.24
USP47-208ENST00000529813 KDM5BQ9UGL1 1544 aa7.29□□□□□ -1.24
USP47-208ENST00000529813 CEP162Q5TB80 1403 aa7.28□□□□□ -1.24
USP47-208ENST00000529813 MAPKBP1O60336 1514 aa7.28□□□□□ -1.24
USP47-208ENST00000529813 EPRSP07814 1512 aaKnown RBP7.28□□□□□ -1.24
USP47-208ENST00000529813 CDK13Q14004 1512 aaKnown RBP7.28□□□□□ -1.24
USP47-208ENST00000529813 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.24
USP47-208ENST00000529813 NUP153P49790 1475 aaKnown RBP7.27□□□□□ -1.25
USP47-208ENST00000529813 ZCCHC11Q5TAX3 1644 aaKnown RBP7.26□□□□□ -1.25
USP47-208ENST00000529813 ABCA8O94911 1581 aa7.26□□□□□ -1.25
USP47-208ENST00000529813 PHF23Q9BUL5 403 aaPredicted RBP7.26□□□□□ -1.25
USP47-208ENST00000529813 EFCAB5A4FU69 1503 aa7.26□□□□□ -1.25
USP47-208ENST00000529813 DIP2BQ9P265 1576 aa7.26□□□□□ -1.25
USP47-208ENST00000529813 MLECQ14165 292 aa7.25□□□□□ -1.25
USP47-208ENST00000529813 MTUS2Q5JR59 1369 aa7.25□□□□□ -1.25
USP47-208ENST00000529813 RAPGEF6Q8TEU7 1601 aa7.25□□□□□ -1.25
USP47-208ENST00000529813 SAMD9Q5K651 1589 aa7.25□□□□□ -1.25
USP47-208ENST00000529813 EFCAB2Q5VUJ9 269 aa7.24□□□□□ -1.25
USP47-208ENST00000529813 TEX14Q8IWB6 1497 aa7.22□□□□□ -1.25
USP47-208ENST00000529813 KDM6BO15054 1643 aa7.22□□□□□ -1.25
USP47-208ENST00000529813 CFDP1Q9UEE9 299 aaPredicted RBP7.22□□□□□ -1.25
USP47-208ENST00000529813 AFAP1Q8N556 730 aa7.21□□□□□ -1.26
USP47-208ENST00000529813 KIF13AQ9H1H9 1805 aa7.21□□□□□ -1.26
USP47-208ENST00000529813 COL17A1Q9UMD9 1497 aaPredicted RBP7.21□□□□□ -1.26
USP47-208ENST00000529813 CASKIN1Q8WXD9 1431 aa7.2□□□□□ -1.26
USP47-208ENST00000529813 HNRNPMP52272 730 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP47-208ENST00000529813 HECW1Q76N89 1606 aa7.19□□□□□ -1.26
USP47-208ENST00000529813 CCNB3Q8WWL7 1395 aa7.19□□□□□ -1.26
USP47-208ENST00000529813 TROQ12816 1431 aaPredicted RBP7.19□□□□□ -1.26
USP47-208ENST00000529813 SCAPERQ9BY12 1400 aa7.18□□□□□ -1.26
USP47-208ENST00000529813 KANK4Q5T7N3 995 aaPredicted RBP7.18□□□□□ -1.26
USP47-208ENST00000529813 FANCAO15360 1455 aa7.18□□□□□ -1.26
USP47-208ENST00000529813 PCF11O94913 1555 aaKnown RBP7.18□□□□□ -1.26
USP47-208ENST00000529813 AKNAQ7Z591 1439 aa7.17□□□□□ -1.26
USP47-208ENST00000529813 ZNF644Q9H582 1327 aaPredicted RBP7.17□□□□□ -1.26
USP47-208ENST00000529813 ITGAEP38570 1179 aa7.17□□□□□ -1.26
USP47-208ENST00000529813 ESF1Q9H501 851 aaKnown RBP7.17□□□□□ -1.26
USP47-208ENST00000529813 ARHGAP5Q13017 1502 aa7.17□□□□□ -1.26
USP47-208ENST00000529813 GLI2P10070 1586 aa7.16□□□□□ -1.26
USP47-208ENST00000529813 KDM4FA0A1W2PPD8 638 aa7.16□□□□□ -1.26
USP47-208ENST00000529813 FAM50AQ14320 339 aaKnown RBP7.16□□□□□ -1.26
USP47-208ENST00000529813 CCDC18Q5T9S5 1454 aa7.16□□□□□ -1.26
USP47-208ENST00000529813 FYCO1Q9BQS8 1478 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms