RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 ARHGEF11O15085 1522 aa40.92■■■■■ 4.14
LTBP3-213ENST00000529371 SHROOM2Q13796 1616 aa40.9■■■■■ 4.14
LTBP3-213ENST00000529371 CTTNBP2Q8WZ74 1663 aa40.9■■■■■ 4.14
LTBP3-213ENST00000529371 IQGAP2Q13576 1575 aa40.9■■■■■ 4.14
LTBP3-213ENST00000529371 JPH4Q96JJ6 628 aa40.87■■■■■ 4.13
LTBP3-213ENST00000529371 RIMBP3CA6NJZ7 1639 aa40.86■■■■■ 4.13
LTBP3-213ENST00000529371 RIMBP3BA6NNM3 1639 aa40.86■■■■■ 4.13
LTBP3-213ENST00000529371 RIMBP3Q9UFD9 1639 aa40.86■■■■■ 4.13
LTBP3-213ENST00000529371 GOLGA3Q08378 1498 aa40.84■■■■■ 4.13
LTBP3-213ENST00000529371 EHMT2Q96KQ7 1210 aa40.79■■■■■ 4.12
LTBP3-213ENST00000529371 PRG4Q92954 1404 aaPredicted RBP40.78■■■■■ 4.12
LTBP3-213ENST00000529371 UBTFP17480 764 aaKnown RBP40.71■■■■■ 4.11
LTBP3-213ENST00000529371 ERCC6L2Q5T890 1561 aa40.67■■■■■ 4.1
LTBP3-213ENST00000529371 UGGT2Q9NYU1 1516 aa40.66■■■■■ 4.1
LTBP3-213ENST00000529371 CARMIL2Q6F5E8 1435 aa40.64■■■■■ 4.1
LTBP3-213ENST00000529371 ARAP1Q96P48 1450 aa40.61■■■■■ 4.09
LTBP3-213ENST00000529371 CYB5RLQ6IPT4 315 aa40.51■■■■■ 4.08
LTBP3-213ENST00000529371 DISP1Q96F81 1524 aa40.5■■■■■ 4.07
LTBP3-213ENST00000529371 KIAA0556O60303 1618 aa40.49■■■■■ 4.07
LTBP3-213ENST00000529371 RANGAP1P46060 587 aaPredicted RBP40.45■■■■■ 4.07
LTBP3-213ENST00000529371 TNIKQ9UKE5 1360 aa40.44■■■■■ 4.06
LTBP3-213ENST00000529371 TTBK1Q5TCY1 1321 aaPredicted RBP40.37■■■■■ 4.05
LTBP3-213ENST00000529371 PTPRGP23470 1445 aa40.36■■■■■ 4.05
LTBP3-213ENST00000529371 SAMD9Q5K651 1589 aa40.35■■■■■ 4.05
LTBP3-213ENST00000529371 EFCAB5A4FU69 1503 aa40.33■■■■■ 4.05
LTBP3-213ENST00000529371 P3H3Q8IVL6 736 aa40.28■■■■■ 4.04
LTBP3-213ENST00000529371 LOC105371045A0A1W2PR82 267 aa40.24■■■■■ 4.03
LTBP3-213ENST00000529371 FHOD3Q2V2M9 1422 aa40.16■■■■■ 4.02
LTBP3-213ENST00000529371 ARHGAP35Q9NRY4 1499 aa40.13■■■■■ 4.02
LTBP3-213ENST00000529371 CLIP1P30622 1438 aa40.11■■■■■ 4.01
LTBP3-213ENST00000529371 UACAQ9BZF9 1416 aa40.1■■■■■ 4.01
LTBP3-213ENST00000529371 ADCY10Q96PN6 1610 aa40.06■■■■■ 4
LTBP3-213ENST00000529371 ABCC2Q92887 1545 aa40.03■■■■■ 4
LTBP3-213ENST00000529371 CEP162Q5TB80 1403 aa40.03■■■■■ 4
LTBP3-213ENST00000529371 UHRF1BP1LA0JNW5 1464 aa40.02■■■■■ 4
LTBP3-213ENST00000529371 PLB1Q6P1J6 1458 aa40.01■■■■■ 4
LTBP3-213ENST00000529371 NPM1P06748 294 aaKnown RBP eCLIP40■■■■□ 3.99
LTBP3-213ENST00000529371 ABCA8O94911 1581 aa39.99■■■■□ 3.99
LTBP3-213ENST00000529371 FMN1Q68DA7 1419 aa39.95■■■■□ 3.99
LTBP3-213ENST00000529371 RAPGEF6Q8TEU7 1601 aa39.91■■■■□ 3.98
LTBP3-213ENST00000529371 KDM5BQ9UGL1 1544 aa39.81■■■■□ 3.96
LTBP3-213ENST00000529371 ZCCHC11Q5TAX3 1644 aaKnown RBP39.76■■■■□ 3.96
LTBP3-213ENST00000529371 MAPKBP1O60336 1514 aa39.75■■■■□ 3.95
LTBP3-213ENST00000529371 ATP1B4Q9UN42 357 aaPredicted RBP39.73■■■■□ 3.95
LTBP3-213ENST00000529371 HECW1Q76N89 1606 aa39.73■■■■□ 3.95
LTBP3-213ENST00000529371 ARID3CA6NKF2 412 aa39.72■■■■□ 3.95
LTBP3-213ENST00000529371 NUP153P49790 1475 aaKnown RBP39.72■■■■□ 3.95
LTBP3-213ENST00000529371 PCF11O94913 1555 aaKnown RBP39.67■■■■□ 3.94
LTBP3-213ENST00000529371 CASKIN1Q8WXD9 1431 aa39.65■■■■□ 3.94
LTBP3-213ENST00000529371 ATP10BO94823 1461 aa39.65■■■■□ 3.94
LTBP3-213ENST00000529371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.65■■■■□ 3.94
LTBP3-213ENST00000529371 HNRNPUL2Q1KMD3 747 aaKnown RBP39.65■■■■□ 3.94
LTBP3-213ENST00000529371 ASXL2Q76L83 1435 aa39.63■■■■□ 3.93
LTBP3-213ENST00000529371 FYCO1Q9BQS8 1478 aa39.62■■■■□ 3.93
LTBP3-213ENST00000529371 TRHP20396 242 aaPredicted RBP39.6■■■■□ 3.93
LTBP3-213ENST00000529371 EPRSP07814 1512 aaKnown RBP39.55■■■■□ 3.92
LTBP3-213ENST00000529371 WDR7Q9Y4E6 1490 aa39.53■■■■□ 3.92
LTBP3-213ENST00000529371 CDK13Q14004 1512 aaKnown RBP39.52■■■■□ 3.92
LTBP3-213ENST00000529371 VPS8Q8N3P4 1428 aa39.52■■■■□ 3.92
LTBP3-213ENST00000529371 CCDC18Q5T9S5 1454 aa39.5■■■■□ 3.91
LTBP3-213ENST00000529371 ABCC10Q5T3U5 1492 aa39.49■■■■□ 3.91
LTBP3-213ENST00000529371 DIP2BQ9P265 1576 aa39.45■■■■□ 3.91
LTBP3-213ENST00000529371 PLEKHD1A6NEE1 506 aa39.42■■■■□ 3.9
LTBP3-213ENST00000529371 CDK11AQ9UQ88 783 aaPredicted RBP39.42■■■■□ 3.9
LTBP3-213ENST00000529371 LRRIQ1Q96JM4 1722 aa39.41■■■■□ 3.9
LTBP3-213ENST00000529371 FAM69CQ0P6D2 419 aa39.41■■■■□ 3.9
LTBP3-213ENST00000529371 KIF13AQ9H1H9 1805 aa39.37■■■■□ 3.89
LTBP3-213ENST00000529371 KCNH8Q96L42 1107 aa39.36■■■■□ 3.89
LTBP3-213ENST00000529371 GLI2P10070 1586 aa39.32■■■■□ 3.88
LTBP3-213ENST00000529371 TROQ12816 1431 aaPredicted RBP39.23■■■■□ 3.87
LTBP3-213ENST00000529371 CFAP43Q8NDM7 1665 aa39.19■■■■□ 3.86
LTBP3-213ENST00000529371 APLP2Q06481 763 aa39.19■■■■□ 3.86
LTBP3-213ENST00000529371 KIF14Q15058 1648 aa39.16■■■■□ 3.86
LTBP3-213ENST00000529371 TIAM1Q13009 1591 aa39.16■■■■□ 3.86
LTBP3-213ENST00000529371 MAP3K4Q9Y6R4 1608 aa39.15■■■■□ 3.86
LTBP3-213ENST00000529371 MTUS2Q5JR59 1369 aa39.15■■■■□ 3.86
LTBP3-213ENST00000529371 ABCA9Q8IUA7 1624 aa39.14■■■■□ 3.86
LTBP3-213ENST00000529371 MAGI3Q5TCQ9 1506 aa39.12■■■■□ 3.85
LTBP3-213ENST00000529371 TSPOAP1O95153 1857 aa39.11■■■■□ 3.85
LTBP3-213ENST00000529371 CD109Q6YHK3 1445 aa39.11■■■■□ 3.85
LTBP3-213ENST00000529371 MAP3K1Q13233 1512 aa39.09■■■■□ 3.85
LTBP3-213ENST00000529371 EHBP1L1Q8N3D4 1523 aa39.09■■■■□ 3.85
LTBP3-213ENST00000529371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.07■■■■□ 3.84
LTBP3-213ENST00000529371 TTC37Q6PGP7 1564 aa39.03■■■■□ 3.84
LTBP3-213ENST00000529371 TEX14Q8IWB6 1497 aa39.02■■■■□ 3.84
LTBP3-213ENST00000529371 PPRC1Q5VV67 1664 aaKnown RBP38.97■■■■□ 3.83
LTBP3-213ENST00000529371 LRRC9Q6ZRR7 1453 aa38.97■■■■□ 3.83
LTBP3-213ENST00000529371 MYO5CQ9NQX4 1742 aa38.91■■■■□ 3.82
LTBP3-213ENST00000529371 SUPT6HQ7KZ85 1726 aaKnown RBP38.89■■■■□ 3.82
LTBP3-213ENST00000529371 KANK4Q5T7N3 995 aaPredicted RBP38.86■■■■□ 3.81
LTBP3-213ENST00000529371 PLCH2O75038 1416 aa38.85■■■■□ 3.81
LTBP3-213ENST00000529371 CFAP74Q9C0B2 1584 aa38.82■■■■□ 3.81
LTBP3-213ENST00000529371 CCNB3Q8WWL7 1395 aa38.82■■■■□ 3.8
LTBP3-213ENST00000529371 ARAP3Q8WWN8 1544 aa38.81■■■■□ 3.8
LTBP3-213ENST00000529371 NCOA2Q15596 1464 aa38.8■■■■□ 3.8
LTBP3-213ENST00000529371 FANCAO15360 1455 aa38.79■■■■□ 3.8
LTBP3-213ENST00000529371 ARHGAP5Q13017 1502 aa38.79■■■■□ 3.8
LTBP3-213ENST00000529371 NEO1Q92859 1461 aa38.79■■■■□ 3.8
LTBP3-213ENST00000529371 PREX2Q70Z35 1606 aa38.78■■■■□ 3.8
LTBP3-213ENST00000529371 PHLDB1Q86UU1 1377 aa38.76■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms