RNA–Protein interactions for RNA: ENST00000529044.5

TRIM29-213, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-213ENST00000529044 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
TRIM29-213ENST00000529044 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
TRIM29-213ENST00000529044 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
TRIM29-213ENST00000529044 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
TRIM29-213ENST00000529044 CLIP1P30622 1438 aa18.95■□□□□ 0.62
TRIM29-213ENST00000529044 CHD1O14646 1710 aa18.94■□□□□ 0.62
TRIM29-213ENST00000529044 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
TRIM29-213ENST00000529044 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
TRIM29-213ENST00000529044 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
TRIM29-213ENST00000529044 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
TRIM29-213ENST00000529044 RANGAP1P46060 587 aaPredicted RBP18.84■□□□□ 0.61
TRIM29-213ENST00000529044 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.6
TRIM29-213ENST00000529044 IQGAP2Q13576 1575 aa18.81■□□□□ 0.6
TRIM29-213ENST00000529044 EFCAB5A4FU69 1503 aa18.8■□□□□ 0.6
TRIM29-213ENST00000529044 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
TRIM29-213ENST00000529044 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
TRIM29-213ENST00000529044 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
TRIM29-213ENST00000529044 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
TRIM29-213ENST00000529044 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
TRIM29-213ENST00000529044 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
TRIM29-213ENST00000529044 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
TRIM29-213ENST00000529044 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
TRIM29-213ENST00000529044 NUP160Q12769 1436 aa18.68■□□□□ 0.58
TRIM29-213ENST00000529044 FBLN2P98095 1184 aa18.68■□□□□ 0.58
TRIM29-213ENST00000529044 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
TRIM29-213ENST00000529044 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
TRIM29-213ENST00000529044 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.58
TRIM29-213ENST00000529044 KIAA0556O60303 1618 aa18.63■□□□□ 0.57
TRIM29-213ENST00000529044 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
TRIM29-213ENST00000529044 CFAP43Q8NDM7 1665 aa18.59■□□□□ 0.57
TRIM29-213ENST00000529044 FMN1Q68DA7 1419 aa18.56■□□□□ 0.56
TRIM29-213ENST00000529044 DISP1Q96F81 1524 aa18.55■□□□□ 0.56
TRIM29-213ENST00000529044 FYCO1Q9BQS8 1478 aa18.55■□□□□ 0.56
TRIM29-213ENST00000529044 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
TRIM29-213ENST00000529044 APLP2Q06481 763 aa18.53■□□□□ 0.56
TRIM29-213ENST00000529044 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
TRIM29-213ENST00000529044 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
TRIM29-213ENST00000529044 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
TRIM29-213ENST00000529044 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
TRIM29-213ENST00000529044 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
TRIM29-213ENST00000529044 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
TRIM29-213ENST00000529044 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
TRIM29-213ENST00000529044 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
TRIM29-213ENST00000529044 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
TRIM29-213ENST00000529044 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
TRIM29-213ENST00000529044 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
TRIM29-213ENST00000529044 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
TRIM29-213ENST00000529044 PRG4Q92954 1404 aaPredicted RBP18.41■□□□□ 0.54
TRIM29-213ENST00000529044 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
TRIM29-213ENST00000529044 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
TRIM29-213ENST00000529044 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
TRIM29-213ENST00000529044 ERCC6L2Q5T890 1561 aa18.37■□□□□ 0.53
TRIM29-213ENST00000529044 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
TRIM29-213ENST00000529044 ABCA8O94911 1581 aa18.34■□□□□ 0.53
TRIM29-213ENST00000529044 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
TRIM29-213ENST00000529044 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
TRIM29-213ENST00000529044 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
TRIM29-213ENST00000529044 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
TRIM29-213ENST00000529044 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
TRIM29-213ENST00000529044 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
TRIM29-213ENST00000529044 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
TRIM29-213ENST00000529044 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
TRIM29-213ENST00000529044 PTPRGP23470 1445 aa18.26■□□□□ 0.51
TRIM29-213ENST00000529044 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
TRIM29-213ENST00000529044 MTUS2Q5JR59 1369 aa18.24■□□□□ 0.51
TRIM29-213ENST00000529044 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
TRIM29-213ENST00000529044 ARID3CA6NKF2 412 aa18.19■□□□□ 0.5
TRIM29-213ENST00000529044 UACAQ9BZF9 1416 aa18.18■□□□□ 0.5
TRIM29-213ENST00000529044 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
TRIM29-213ENST00000529044 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
TRIM29-213ENST00000529044 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
TRIM29-213ENST00000529044 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
TRIM29-213ENST00000529044 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
TRIM29-213ENST00000529044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
TRIM29-213ENST00000529044 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
TRIM29-213ENST00000529044 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
TRIM29-213ENST00000529044 ATP10BO94823 1461 aa18.13■□□□□ 0.49
TRIM29-213ENST00000529044 KIF14Q15058 1648 aa18.12■□□□□ 0.49
TRIM29-213ENST00000529044 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
TRIM29-213ENST00000529044 CCNB3Q8WWL7 1395 aa18.11■□□□□ 0.49
TRIM29-213ENST00000529044 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
TRIM29-213ENST00000529044 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
TRIM29-213ENST00000529044 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
TRIM29-213ENST00000529044 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
TRIM29-213ENST00000529044 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
TRIM29-213ENST00000529044 KDM5BQ9UGL1 1544 aa18.04■□□□□ 0.48
TRIM29-213ENST00000529044 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
TRIM29-213ENST00000529044 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
TRIM29-213ENST00000529044 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
TRIM29-213ENST00000529044 DIP2BQ9P265 1576 aa18.02■□□□□ 0.48
TRIM29-213ENST00000529044 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
TRIM29-213ENST00000529044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRIM29-213ENST00000529044 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
TRIM29-213ENST00000529044 MYO5CQ9NQX4 1742 aa17.98■□□□□ 0.47
TRIM29-213ENST00000529044 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
TRIM29-213ENST00000529044 PREX2Q70Z35 1606 aa17.97■□□□□ 0.47
TRIM29-213ENST00000529044 MIA2Q96PC5 1412 aa17.97■□□□□ 0.47
TRIM29-213ENST00000529044 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.46
TRIM29-213ENST00000529044 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
TRIM29-213ENST00000529044 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms