RNA–Protein interactions for RNA: ENST00000528984.5

ATG13-213, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-213ENST00000528984 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
ATG13-213ENST00000528984 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
ATG13-213ENST00000528984 IQGAP2Q13576 1575 aa16.43■□□□□ 0.22
ATG13-213ENST00000528984 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
ATG13-213ENST00000528984 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
ATG13-213ENST00000528984 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
ATG13-213ENST00000528984 CHD1O14646 1710 aa16.39■□□□□ 0.21
ATG13-213ENST00000528984 FBLN2P98095 1184 aa16.37■□□□□ 0.21
ATG13-213ENST00000528984 APLP2Q06481 763 aa16.37■□□□□ 0.21
ATG13-213ENST00000528984 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
ATG13-213ENST00000528984 KIAA0586Q9BVV6 1533 aa16.34■□□□□ 0.21
ATG13-213ENST00000528984 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
ATG13-213ENST00000528984 FHOD3Q2V2M9 1422 aa16.3■□□□□ 0.2
ATG13-213ENST00000528984 UGGT2Q9NYU1 1516 aa16.29■□□□□ 0.2
ATG13-213ENST00000528984 NUP160Q12769 1436 aa16.28■□□□□ 0.2
ATG13-213ENST00000528984 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
ATG13-213ENST00000528984 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
ATG13-213ENST00000528984 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
ATG13-213ENST00000528984 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
ATG13-213ENST00000528984 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
ATG13-213ENST00000528984 KIAA0556O60303 1618 aa16.25■□□□□ 0.19
ATG13-213ENST00000528984 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
ATG13-213ENST00000528984 CFAP43Q8NDM7 1665 aa16.22■□□□□ 0.19
ATG13-213ENST00000528984 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
ATG13-213ENST00000528984 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
ATG13-213ENST00000528984 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
ATG13-213ENST00000528984 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
ATG13-213ENST00000528984 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
ATG13-213ENST00000528984 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
ATG13-213ENST00000528984 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
ATG13-213ENST00000528984 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
ATG13-213ENST00000528984 DISP1Q96F81 1524 aa16.17■□□□□ 0.18
ATG13-213ENST00000528984 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
ATG13-213ENST00000528984 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
ATG13-213ENST00000528984 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
ATG13-213ENST00000528984 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
ATG13-213ENST00000528984 RAPGEF6Q8TEU7 1601 aa16.11■□□□□ 0.17
ATG13-213ENST00000528984 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
ATG13-213ENST00000528984 PRG4Q92954 1404 aaPredicted RBP16.08■□□□□ 0.16
ATG13-213ENST00000528984 LRRC9Q6ZRR7 1453 aa16.07■□□□□ 0.16
ATG13-213ENST00000528984 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
ATG13-213ENST00000528984 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
ATG13-213ENST00000528984 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.15
ATG13-213ENST00000528984 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
ATG13-213ENST00000528984 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
ATG13-213ENST00000528984 ABCA8O94911 1581 aa15.98■□□□□ 0.15
ATG13-213ENST00000528984 PTPRGP23470 1445 aa15.98■□□□□ 0.15
ATG13-213ENST00000528984 CDK13Q14004 1512 aaKnown RBP15.98■□□□□ 0.15
ATG13-213ENST00000528984 PLB1Q6P1J6 1458 aa15.97■□□□□ 0.15
ATG13-213ENST00000528984 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
ATG13-213ENST00000528984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
ATG13-213ENST00000528984 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
ATG13-213ENST00000528984 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
ATG13-213ENST00000528984 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
ATG13-213ENST00000528984 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
ATG13-213ENST00000528984 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
ATG13-213ENST00000528984 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
ATG13-213ENST00000528984 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
ATG13-213ENST00000528984 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
ATG13-213ENST00000528984 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
ATG13-213ENST00000528984 CCNB3Q8WWL7 1395 aa15.88■□□□□ 0.13
ATG13-213ENST00000528984 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
ATG13-213ENST00000528984 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
ATG13-213ENST00000528984 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
ATG13-213ENST00000528984 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
ATG13-213ENST00000528984 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
ATG13-213ENST00000528984 KIF14Q15058 1648 aa15.84■□□□□ 0.13
ATG13-213ENST00000528984 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
ATG13-213ENST00000528984 ATP10BO94823 1461 aa15.83■□□□□ 0.12
ATG13-213ENST00000528984 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
ATG13-213ENST00000528984 UHRF1BP1LA0JNW5 1464 aa15.81■□□□□ 0.12
ATG13-213ENST00000528984 PLEKHD1A6NEE1 506 aa15.81■□□□□ 0.12
ATG13-213ENST00000528984 ZCCHC11Q5TAX3 1644 aaKnown RBP15.81■□□□□ 0.12
ATG13-213ENST00000528984 FGD6Q6ZV73 1430 aa15.81■□□□□ 0.12
ATG13-213ENST00000528984 PTPN23Q9H3S7 1636 aa15.8■□□□□ 0.12
ATG13-213ENST00000528984 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
ATG13-213ENST00000528984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.76■□□□□ 0.11
ATG13-213ENST00000528984 ITGAEP38570 1179 aa15.75■□□□□ 0.11
ATG13-213ENST00000528984 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
ATG13-213ENST00000528984 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
ATG13-213ENST00000528984 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
ATG13-213ENST00000528984 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.1
ATG13-213ENST00000528984 MYO5CQ9NQX4 1742 aa15.7■□□□□ 0.1
ATG13-213ENST00000528984 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
ATG13-213ENST00000528984 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
ATG13-213ENST00000528984 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
ATG13-213ENST00000528984 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
ATG13-213ENST00000528984 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
ATG13-213ENST00000528984 HRCP23327 699 aa15.67■□□□□ 0.1
ATG13-213ENST00000528984 ABCC10Q5T3U5 1492 aa15.66■□□□□ 0.1
ATG13-213ENST00000528984 CCER1Q8TC90 406 aaPredicted RBP15.66■□□□□ 0.1
ATG13-213ENST00000528984 GPATCH8Q9UKJ3 1502 aaKnown RBP15.66■□□□□ 0.1
ATG13-213ENST00000528984 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
ATG13-213ENST00000528984 TTC37Q6PGP7 1564 aa15.65■□□□□ 0.1
ATG13-213ENST00000528984 DNMT1P26358 1616 aaKnown RBP15.65■□□□□ 0.1
ATG13-213ENST00000528984 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
ATG13-213ENST00000528984 CDC42BPBQ9Y5S2 1711 aa15.64■□□□□ 0.09
ATG13-213ENST00000528984 CAMSAP2Q08AD1 1489 aa15.64■□□□□ 0.09
ATG13-213ENST00000528984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.63■□□□□ 0.09
ATG13-213ENST00000528984 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms