RNA–Protein interactions for RNA: ENST00000528962.1

TCP11L1-206, Transcript of t-complex 11 like 1, humanhuman

TSL 3

Gene TCP11L1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCP11L1-206ENST00000528962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.81
TCP11L1-206ENST00000528962 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
TCP11L1-206ENST00000528962 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
TCP11L1-206ENST00000528962 SOGA1O94964 1423 aa20.07■□□□□ 0.8
TCP11L1-206ENST00000528962 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
TCP11L1-206ENST00000528962 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
TCP11L1-206ENST00000528962 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
TCP11L1-206ENST00000528962 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
TCP11L1-206ENST00000528962 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
TCP11L1-206ENST00000528962 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
TCP11L1-206ENST00000528962 U3KPZ7 1027 aaPredicted RBP19.96■□□□□ 0.79
TCP11L1-206ENST00000528962 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
TCP11L1-206ENST00000528962 ILDR1Q86SU0 546 aaPredicted RBP19.83■□□□□ 0.77
TCP11L1-206ENST00000528962 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
TCP11L1-206ENST00000528962 CUX1P39880 1505 aa19.77■□□□□ 0.76
TCP11L1-206ENST00000528962 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
TCP11L1-206ENST00000528962 ATXN8OSP0DMR3 200 aa19.73■□□□□ 0.75
TCP11L1-206ENST00000528962 KIF13AQ9H1H9 1805 aa19.72■□□□□ 0.75
TCP11L1-206ENST00000528962 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
TCP11L1-206ENST00000528962 KDM4FA0A1W2PPD8 638 aa19.71■□□□□ 0.75
TCP11L1-206ENST00000528962 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
TCP11L1-206ENST00000528962 NUP160Q12769 1436 aa19.68■□□□□ 0.74
TCP11L1-206ENST00000528962 ATF5Q9Y2D1 282 aaPredicted RBP19.67■□□□□ 0.74
TCP11L1-206ENST00000528962 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
TCP11L1-206ENST00000528962 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
TCP11L1-206ENST00000528962 SHROOM2Q13796 1616 aa19.64■□□□□ 0.73
TCP11L1-206ENST00000528962 FAM69CQ0P6D2 419 aa19.63■□□□□ 0.73
TCP11L1-206ENST00000528962 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
TCP11L1-206ENST00000528962 SAMD1Q6SPF0 538 aaPredicted RBP19.6■□□□□ 0.73
TCP11L1-206ENST00000528962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
TCP11L1-206ENST00000528962 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
TCP11L1-206ENST00000528962 RNF39Q9H2S5 420 aa19.58■□□□□ 0.72
TCP11L1-206ENST00000528962 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
TCP11L1-206ENST00000528962 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
TCP11L1-206ENST00000528962 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
TCP11L1-206ENST00000528962 NPM1P06748 294 aaKnown RBP eCLIP19.53■□□□□ 0.72
TCP11L1-206ENST00000528962 MAPKBP1O60336 1514 aa19.52■□□□□ 0.72
TCP11L1-206ENST00000528962 KDM6BO15054 1643 aa19.51■□□□□ 0.71
TCP11L1-206ENST00000528962 JPH4Q96JJ6 628 aa19.5■□□□□ 0.71
TCP11L1-206ENST00000528962 DIP2BQ9P265 1576 aa19.49■□□□□ 0.71
TCP11L1-206ENST00000528962 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
TCP11L1-206ENST00000528962 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
TCP11L1-206ENST00000528962 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
TCP11L1-206ENST00000528962 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
TCP11L1-206ENST00000528962 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
TCP11L1-206ENST00000528962 ADGRL1O94910 1474 aa19.33■□□□□ 0.68
TCP11L1-206ENST00000528962 TSPOAP1O95153 1857 aa19.31■□□□□ 0.68
TCP11L1-206ENST00000528962 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
TCP11L1-206ENST00000528962 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
TCP11L1-206ENST00000528962 HECW2Q9P2P5 1572 aa19.27■□□□□ 0.68
TCP11L1-206ENST00000528962 C1QBPQ07021 282 aaKnown RBP19.26■□□□□ 0.67
TCP11L1-206ENST00000528962 APLP2Q06481 763 aa19.24■□□□□ 0.67
TCP11L1-206ENST00000528962 FBXO41Q8TF61 875 aa19.19■□□□□ 0.66
TCP11L1-206ENST00000528962 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
TCP11L1-206ENST00000528962 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
TCP11L1-206ENST00000528962 GLI2P10070 1586 aa19.18■□□□□ 0.66
TCP11L1-206ENST00000528962 PPRC1Q5VV67 1664 aaKnown RBP19.16■□□□□ 0.66
TCP11L1-206ENST00000528962 PTPRGP23470 1445 aa19.15■□□□□ 0.66
TCP11L1-206ENST00000528962 PLB1Q6P1J6 1458 aa19.15■□□□□ 0.66
TCP11L1-206ENST00000528962 COL17A1Q9UMD9 1497 aaPredicted RBP19.15■□□□□ 0.66
TCP11L1-206ENST00000528962 ASXL2Q76L83 1435 aa19.14■□□□□ 0.65
TCP11L1-206ENST00000528962 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
TCP11L1-206ENST00000528962 CAPN15O75808 1086 aa19.08■□□□□ 0.64
TCP11L1-206ENST00000528962 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
TCP11L1-206ENST00000528962 TEX14Q8IWB6 1497 aa19.04■□□□□ 0.64
TCP11L1-206ENST00000528962 UHRF1BP1LA0JNW5 1464 aa19.03■□□□□ 0.64
TCP11L1-206ENST00000528962 EPRSP07814 1512 aaKnown RBP19.02■□□□□ 0.64
TCP11L1-206ENST00000528962 IGF1RP08069 1367 aa19.02■□□□□ 0.64
TCP11L1-206ENST00000528962 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
TCP11L1-206ENST00000528962 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
TCP11L1-206ENST00000528962 MAP3K4Q9Y6R4 1608 aa19.01■□□□□ 0.63
TCP11L1-206ENST00000528962 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
TCP11L1-206ENST00000528962 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
TCP11L1-206ENST00000528962 CUL7Q14999 1698 aa18.96■□□□□ 0.63
TCP11L1-206ENST00000528962 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
TCP11L1-206ENST00000528962 POLA2Q14181 598 aa18.87■□□□□ 0.61
TCP11L1-206ENST00000528962 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
TCP11L1-206ENST00000528962 ABCB7O75027 752 aa18.85■□□□□ 0.61
TCP11L1-206ENST00000528962 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
TCP11L1-206ENST00000528962 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
TCP11L1-206ENST00000528962 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
TCP11L1-206ENST00000528962 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
TCP11L1-206ENST00000528962 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
TCP11L1-206ENST00000528962 MKRN4PQ13434 485 aaPredicted RBP18.83■□□□□ 0.6
TCP11L1-206ENST00000528962 FKBP8Q14318 412 aa18.83■□□□□ 0.6
TCP11L1-206ENST00000528962 WDR7Q9Y4E6 1490 aa18.83■□□□□ 0.6
TCP11L1-206ENST00000528962 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
TCP11L1-206ENST00000528962 PTPRMP28827 1452 aa18.78■□□□□ 0.6
TCP11L1-206ENST00000528962 KIF21BO75037 1637 aa18.77■□□□□ 0.6
TCP11L1-206ENST00000528962 DSG3P32926 999 aa18.75■□□□□ 0.59
TCP11L1-206ENST00000528962 UGGT2Q9NYU1 1516 aa18.74■□□□□ 0.59
TCP11L1-206ENST00000528962 CFAP43Q8NDM7 1665 aa18.73■□□□□ 0.59
TCP11L1-206ENST00000528962 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
TCP11L1-206ENST00000528962 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
TCP11L1-206ENST00000528962 ADAMTSL3P82987 1691 aa18.71■□□□□ 0.59
TCP11L1-206ENST00000528962 KCNH8Q96L42 1107 aa18.71■□□□□ 0.59
TCP11L1-206ENST00000528962 SOCS7O14512 581 aa18.7■□□□□ 0.58
TCP11L1-206ENST00000528962 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
TCP11L1-206ENST00000528962 EEA1Q15075 1411 aa18.69■□□□□ 0.58
TCP11L1-206ENST00000528962 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms