RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
AP002008.3-201ENST00000528614 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
AP002008.3-201ENST00000528614 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
AP002008.3-201ENST00000528614 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
AP002008.3-201ENST00000528614 LRRC9Q6ZRR7 1453 aa15.4■□□□□ 0.06
AP002008.3-201ENST00000528614 FHAD1B1AJZ9 1412 aa15.4■□□□□ 0.06
AP002008.3-201ENST00000528614 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
AP002008.3-201ENST00000528614 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
AP002008.3-201ENST00000528614 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
AP002008.3-201ENST00000528614 RAB3GAP2Q9H2M9 1393 aa15.35■□□□□ 0.05
AP002008.3-201ENST00000528614 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
AP002008.3-201ENST00000528614 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
AP002008.3-201ENST00000528614 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
AP002008.3-201ENST00000528614 URB2Q14146 1524 aaKnown RBP15.32■□□□□ 0.04
AP002008.3-201ENST00000528614 CUL7Q14999 1698 aa15.31■□□□□ 0.04
AP002008.3-201ENST00000528614 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
AP002008.3-201ENST00000528614 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
AP002008.3-201ENST00000528614 CFAP43Q8NDM7 1665 aa15.3■□□□□ 0.04
AP002008.3-201ENST00000528614 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
AP002008.3-201ENST00000528614 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
AP002008.3-201ENST00000528614 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
AP002008.3-201ENST00000528614 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
AP002008.3-201ENST00000528614 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
AP002008.3-201ENST00000528614 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
AP002008.3-201ENST00000528614 CTTNBP2Q8WZ74 1663 aa15.26■□□□□ 0.03
AP002008.3-201ENST00000528614 MAPKBP1O60336 1514 aa15.25■□□□□ 0.03
AP002008.3-201ENST00000528614 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
AP002008.3-201ENST00000528614 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
AP002008.3-201ENST00000528614 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
AP002008.3-201ENST00000528614 GAPVD1Q14C86 1478 aa15.22■□□□□ 0.03
AP002008.3-201ENST00000528614 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.03
AP002008.3-201ENST00000528614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
AP002008.3-201ENST00000528614 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
AP002008.3-201ENST00000528614 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
AP002008.3-201ENST00000528614 MTUS2Q5JR59 1369 aa15.16■□□□□ 0.02
AP002008.3-201ENST00000528614 SAMD9Q5K651 1589 aa15.15■□□□□ 0.02
AP002008.3-201ENST00000528614 FGD6Q6ZV73 1430 aa15.15■□□□□ 0.02
AP002008.3-201ENST00000528614 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
AP002008.3-201ENST00000528614 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
AP002008.3-201ENST00000528614 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
AP002008.3-201ENST00000528614 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
AP002008.3-201ENST00000528614 LRRIQ1Q96JM4 1722 aa15.09■□□□□ 0.01
AP002008.3-201ENST00000528614 PTPRKQ15262 1439 aa15.08■□□□□ 0
AP002008.3-201ENST00000528614 NCOA2Q15596 1464 aa15.08■□□□□ 0
AP002008.3-201ENST00000528614 PPP1R15AO75807 674 aaPredicted RBP15.06■□□□□ 0
AP002008.3-201ENST00000528614 MYOM3Q5VTT5 1437 aa15.06■□□□□ 0
AP002008.3-201ENST00000528614 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ 0
AP002008.3-201ENST00000528614 HFM1A2PYH4 1435 aa15.04■□□□□ -0
AP002008.3-201ENST00000528614 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
AP002008.3-201ENST00000528614 EHBP1L1Q8N3D4 1523 aa15.03■□□□□ -0
AP002008.3-201ENST00000528614 SUPT6HQ7KZ85 1726 aaKnown RBP15.02■□□□□ -0
AP002008.3-201ENST00000528614 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
AP002008.3-201ENST00000528614 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
AP002008.3-201ENST00000528614 NAIPQ13075 1403 aa15.01□□□□□ -0.01
AP002008.3-201ENST00000528614 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
AP002008.3-201ENST00000528614 PTPN23Q9H3S7 1636 aa15□□□□□ -0.01
AP002008.3-201ENST00000528614 MAGI3Q5TCQ9 1506 aa15□□□□□ -0.01
AP002008.3-201ENST00000528614 KCNH8Q96L42 1107 aa15□□□□□ -0.01
AP002008.3-201ENST00000528614 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
AP002008.3-201ENST00000528614 MRC2Q9UBG0 1479 aa14.99□□□□□ -0.01
AP002008.3-201ENST00000528614 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
AP002008.3-201ENST00000528614 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
AP002008.3-201ENST00000528614 ARHGEF11O15085 1522 aa14.98□□□□□ -0.01
AP002008.3-201ENST00000528614 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
AP002008.3-201ENST00000528614 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
AP002008.3-201ENST00000528614 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
AP002008.3-201ENST00000528614 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
AP002008.3-201ENST00000528614 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
AP002008.3-201ENST00000528614 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
AP002008.3-201ENST00000528614 ARID3CA6NKF2 412 aa14.94□□□□□ -0.02
AP002008.3-201ENST00000528614 TCOF1Q13428 1488 aaKnown RBP14.93□□□□□ -0.02
AP002008.3-201ENST00000528614 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
AP002008.3-201ENST00000528614 ZNF608Q9ULD9 1512 aaPredicted RBP14.92□□□□□ -0.02
AP002008.3-201ENST00000528614 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
AP002008.3-201ENST00000528614 SUPT16HQ9Y5B9 1047 aaKnown RBP14.9□□□□□ -0.02
AP002008.3-201ENST00000528614 WDR62O43379 1518 aa14.89□□□□□ -0.03
AP002008.3-201ENST00000528614 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
AP002008.3-201ENST00000528614 MIA2Q96PC5 1412 aa14.88□□□□□ -0.03
AP002008.3-201ENST00000528614 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
AP002008.3-201ENST00000528614 ANP32CO43423 234 aa14.85□□□□□ -0.03
AP002008.3-201ENST00000528614 AKNAQ7Z591 1439 aa14.85□□□□□ -0.03
AP002008.3-201ENST00000528614 DISP1Q96F81 1524 aa14.84□□□□□ -0.03
AP002008.3-201ENST00000528614 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
AP002008.3-201ENST00000528614 DENND4BO75064 1496 aaPredicted RBP14.83□□□□□ -0.03
AP002008.3-201ENST00000528614 CCER2I3L3R5 266 aa14.83□□□□□ -0.03
AP002008.3-201ENST00000528614 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.03
AP002008.3-201ENST00000528614 MPHOSPH9Q99550 1183 aa14.83□□□□□ -0.04
AP002008.3-201ENST00000528614 KDM6BO15054 1643 aa14.83□□□□□ -0.04
AP002008.3-201ENST00000528614 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
AP002008.3-201ENST00000528614 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
AP002008.3-201ENST00000528614 NUP153P49790 1475 aaKnown RBP14.8□□□□□ -0.04
AP002008.3-201ENST00000528614 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
AP002008.3-201ENST00000528614 ZNF644Q9H582 1327 aaPredicted RBP14.79□□□□□ -0.04
AP002008.3-201ENST00000528614 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
AP002008.3-201ENST00000528614 DAPK1P53355 1430 aa14.78□□□□□ -0.04
AP002008.3-201ENST00000528614 FOXD1Q16676 465 aa14.78□□□□□ -0.04
AP002008.3-201ENST00000528614 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.04
AP002008.3-201ENST00000528614 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.05
AP002008.3-201ENST00000528614 ABCC5O15440 1437 aa14.77□□□□□ -0.05
AP002008.3-201ENST00000528614 ROCK1Q13464 1354 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms